RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 RPL37AP61513 92 aaKnown RBP8.02□□□□□ -1.13
SRRM1-216ENST00000489130 RIGQ13278 110 aa8.02□□□□□ -1.13
SRRM1-216ENST00000489130 BTF3L4Q96K17 158 aa8.02□□□□□ -1.13
SRRM1-216ENST00000489130 NAT8BQ9UHF3 227 aa8.02□□□□□ -1.13
SRRM1-216ENST00000489130 FOXI1Q12951 378 aa8.01□□□□□ -1.13
SRRM1-216ENST00000489130 MRPL52Q86TS9 123 aaKnown RBP8.01□□□□□ -1.13
SRRM1-216ENST00000489130 TMEM101Q96IK0 257 aa8.01□□□□□ -1.13
SRRM1-216ENST00000489130 SMDT1Q9H4I9 107 aa8.01□□□□□ -1.13
SRRM1-216ENST00000489130 NAT8Q9UHE5 227 aa8.01□□□□□ -1.13
SRRM1-216ENST00000489130 LRP1Q07954 4544 aaKnown RBP8.01□□□□□ -1.13
SRRM1-216ENST00000489130 GVQW2A0A096LPI5 108 aaPredicted RBP8□□□□□ -1.13
SRRM1-216ENST00000489130 C7orf77A4D0Y5 90 aa8□□□□□ -1.13
SRRM1-216ENST00000489130 PPP1R17O96001 155 aa8□□□□□ -1.13
SRRM1-216ENST00000489130 SRSF3P84103 164 aaKnown RBP8□□□□□ -1.13
SRRM1-216ENST00000489130 ADIRFQ15847 76 aa8□□□□□ -1.13
SRRM1-216ENST00000489130 HIGD2BQ4VC39 106 aa8□□□□□ -1.13
SRRM1-216ENST00000489130 NRACQ8N912 160 aa8□□□□□ -1.13
SRRM1-216ENST00000489130 SPACA4Q8TDM5 124 aa8□□□□□ -1.13
SRRM1-216ENST00000489130 LINC00959A0A1B0GUT2 108 aa7.99□□□□□ -1.13
SRRM1-216ENST00000489130 SMIM27A0A1W2PRY6 76 aa7.99□□□□□ -1.13
SRRM1-216ENST00000489130 SMKR1H3BMG3 65 aa7.99□□□□□ -1.13
SRRM1-216ENST00000489130 VCYO14598 125 aa7.99□□□□□ -1.13
SRRM1-216ENST00000489130 CHTF8P0CG12 524 aa7.99□□□□□ -1.13
SRRM1-216ENST00000489130 XCL1P47992 114 aa7.99□□□□□ -1.13
SRRM1-216ENST00000489130 SUMO2P61956 95 aaKnown RBP7.99□□□□□ -1.13
SRRM1-216ENST00000489130 PEA15Q15121 130 aa7.99□□□□□ -1.13
SRRM1-216ENST00000489130 CDC42SE2Q9NRR3 84 aa7.99□□□□□ -1.13
SRRM1-216ENST00000489130 OXTP01178 125 aa7.98□□□□□ -1.13
SRRM1-216ENST00000489130 MRPL51Q4U2R6 128 aaKnown RBP7.98□□□□□ -1.13
SRRM1-216ENST00000489130 FAM104BQ5XKR9 115 aa7.98□□□□□ -1.13
SRRM1-216ENST00000489130 ZNF664Q8N3J9 261 aa7.98□□□□□ -1.13
SRRM1-216ENST00000489130 FAT3Q8TDW7 4589 aa7.98□□□□□ -1.13
SRRM1-216ENST00000489130 PKHD1L1Q86WI1 4243 aa7.97□□□□□ -1.13
SRRM1-216ENST00000489130 A0A087WYN8 130 aa7.97□□□□□ -1.13
SRRM1-216ENST00000489130 A0A1B0GW15 77 aa7.97□□□□□ -1.13
SRRM1-216ENST00000489130 PPP1R2P9O14990 202 aa7.97□□□□□ -1.13
SRRM1-216ENST00000489130 CCL25O15444 150 aa7.97□□□□□ -1.13
SRRM1-216ENST00000489130 FCER1GP30273 86 aa7.97□□□□□ -1.13
SRRM1-216ENST00000489130 HNRNPA3P51991 378 aaKnown RBP7.97□□□□□ -1.13
SRRM1-216ENST00000489130 COX6A2Q02221 97 aa7.97□□□□□ -1.13
SRRM1-216ENST00000489130 KIR2DL4Q99706 377 aa7.97□□□□□ -1.13
SRRM1-216ENST00000489130 CSDC2Q9Y534 153 aaKnown RBP7.97□□□□□ -1.13
SRRM1-216ENST00000489130 IGHV1-58A0A0C4DH39 117 aa7.96□□□□□ -1.14
SRRM1-216ENST00000489130 SS18Q15532 418 aa7.96□□□□□ -1.14
SRRM1-216ENST00000489130 CD164L2Q6UWJ8 174 aa7.96□□□□□ -1.14
SRRM1-216ENST00000489130 PLAC8Q9NZF1 115 aa7.96□□□□□ -1.14
SRRM1-216ENST00000489130 UBE2D4Q9Y2X8 147 aa7.96□□□□□ -1.14
SRRM1-216ENST00000489130 TRBV24-1A0A075B6N3 115 aa7.95□□□□□ -1.14
SRRM1-216ENST00000489130 LINC00862A6NCI5 91 aa7.95□□□□□ -1.14
SRRM1-216ENST00000489130 CAMPP49913 170 aa7.95□□□□□ -1.14
SRRM1-216ENST00000489130 RPL32P62910 135 aaKnown RBP7.95□□□□□ -1.14
SRRM1-216ENST00000489130 PRSS3P2Q8NHM4 247 aa7.95□□□□□ -1.14
SRRM1-216ENST00000489130 DPH3Q96FX2 82 aa7.95□□□□□ -1.14
SRRM1-216ENST00000489130 C20orf78Q9BR46 151 aa7.95□□□□□ -1.14
SRRM1-216ENST00000489130 SMAGPQ0VAQ4 97 aa7.94□□□□□ -1.14
SRRM1-216ENST00000489130 A0A1B0GXF2 115 aa7.93□□□□□ -1.14
SRRM1-216ENST00000489130 S100A8P05109 93 aa7.93□□□□□ -1.14
SRRM1-216ENST00000489130 CKS2P33552 79 aa7.93□□□□□ -1.14
SRRM1-216ENST00000489130 HBBP68871 147 aa7.93□□□□□ -1.14
SRRM1-216ENST00000489130 TIMM21Q9BVV7 248 aa7.93□□□□□ -1.14
SRRM1-216ENST00000489130 A0A096LNI7 61 aa7.92□□□□□ -1.14
SRRM1-216ENST00000489130 IGKV2-24A0A0C4DH68 120 aa7.92□□□□□ -1.14
SRRM1-216ENST00000489130 C1orf196B1AJZ1 125 aa7.92□□□□□ -1.14
SRRM1-216ENST00000489130 F8W036 122 aa7.92□□□□□ -1.14
SRRM1-216ENST00000489130 TCAPO15273 167 aa7.92□□□□□ -1.14
SRRM1-216ENST00000489130 TNFRSF6BO95407 300 aa7.92□□□□□ -1.14
SRRM1-216ENST00000489130 MAJINQ3KP22 176 aa7.92□□□□□ -1.14
SRRM1-216ENST00000489130 MRPL54Q6P161 138 aaKnown RBP7.92□□□□□ -1.14
SRRM1-216ENST00000489130 TMEM18Q96B42 140 aa7.92□□□□□ -1.14
SRRM1-216ENST00000489130 LINC00526Q96FQ7 95 aa7.92□□□□□ -1.14
SRRM1-216ENST00000489130 CARD19Q96LW7 228 aa7.92□□□□□ -1.14
SRRM1-216ENST00000489130 PKIGQ9Y2B9 76 aa7.92□□□□□ -1.14
SRRM1-216ENST00000489130 D6R8Y8 96 aa7.91□□□□□ -1.14
SRRM1-216ENST00000489130 ZNF561-AS1K7EIQ3 104 aa7.91□□□□□ -1.14
SRRM1-216ENST00000489130 PHOX2AO14813 284 aa7.91□□□□□ -1.14
SRRM1-216ENST00000489130 RNASE13Q5GAN3 156 aaKnown RBP7.91□□□□□ -1.14
SRRM1-216ENST00000489130 Q6ZUT4 128 aa7.91□□□□□ -1.14
SRRM1-216ENST00000489130 C7orf33Q8WU49 177 aa7.91□□□□□ -1.14
SRRM1-216ENST00000489130 SMIM2Q9BVW6 85 aa7.91□□□□□ -1.14
SRRM1-216ENST00000489130 LINC00474Q9P2X8 69 aa7.91□□□□□ -1.14
SRRM1-216ENST00000489130 TRAV13-1A0A0B4J241 112 aa7.9□□□□□ -1.14
SRRM1-216ENST00000489130 COX7A2LO14548 114 aa7.9□□□□□ -1.14
SRRM1-216ENST00000489130 PPBPP02775 128 aa7.9□□□□□ -1.14
SRRM1-216ENST00000489130 SYCNQ0VAF6 134 aa7.9□□□□□ -1.14
SRRM1-216ENST00000489130 SERTAD4-AS1Q5TG53 156 aa7.9□□□□□ -1.14
SRRM1-216ENST00000489130 Q6ZRU5 148 aa7.9□□□□□ -1.14
SRRM1-216ENST00000489130 ATP5L2Q7Z4Y8 100 aa7.9□□□□□ -1.14
SRRM1-216ENST00000489130 STPG4Q8N801 248 aa7.9□□□□□ -1.14
SRRM1-216ENST00000489130 NPYP01303 97 aa7.89□□□□□ -1.15
SRRM1-216ENST00000489130 MALP21145 153 aa7.89□□□□□ -1.15
SRRM1-216ENST00000489130 SPANXA1Q9NS26 97 aa7.89□□□□□ -1.15
SRRM1-216ENST00000489130 IGLV4-69A0A075B6H9 119 aa7.88□□□□□ -1.15
SRRM1-216ENST00000489130 RPL39P62891 51 aaKnown RBP7.88□□□□□ -1.15
SRRM1-216ENST00000489130 ORMDL3Q8N138 153 aa7.88□□□□□ -1.15
SRRM1-216ENST00000489130 FAM104AQ969W3 186 aa7.88□□□□□ -1.15
SRRM1-216ENST00000489130 MRPS36P82909 103 aaKnown RBP7.87□□□□□ -1.15
SRRM1-216ENST00000489130 PNRC1Q12796 327 aaPredicted RBP7.87□□□□□ -1.15
SRRM1-216ENST00000489130 APOMO95445 188 aa7.86□□□□□ -1.15
SRRM1-216ENST00000489130 MT1HL1P0DM35 61 aa7.86□□□□□ -1.15
SRRM1-216ENST00000489130 PRR3P79522 188 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms