RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 H7C423 109 aa8.97□□□□□ -0.97
SPTLC1-207ENST00000488921 SCO1O75880 301 aa8.97□□□□□ -0.97
SPTLC1-207ENST00000488921 MT-ND6P03923 174 aa8.97□□□□□ -0.97
SPTLC1-207ENST00000488921 RAB4AP20338 218 aa8.97□□□□□ -0.97
SPTLC1-207ENST00000488921 AMMECR1LQ6DCA0 310 aa8.97□□□□□ -0.97
SPTLC1-207ENST00000488921 DEFB104AQ8WTQ1 72 aa8.97□□□□□ -0.97
SPTLC1-207ENST00000488921 MRAP2Q96G30 205 aa8.97□□□□□ -0.97
SPTLC1-207ENST00000488921 TRBV6-5A0A0K0K1A5 114 aa8.96□□□□□ -0.98
SPTLC1-207ENST00000488921 PPP1R17O96001 155 aa8.96□□□□□ -0.98
SPTLC1-207ENST00000488921 PPBPP02775 128 aa8.96□□□□□ -0.98
SPTLC1-207ENST00000488921 CKS2P33552 79 aa8.96□□□□□ -0.98
SPTLC1-207ENST00000488921 TMEM136Q6ZRR5 245 aa8.96□□□□□ -0.98
SPTLC1-207ENST00000488921 TRAPPC1Q9Y5R8 145 aa8.96□□□□□ -0.98
SPTLC1-207ENST00000488921 SRRM2Q9UQ35 2752 aaKnown RBP8.96□□□□□ -0.98
SPTLC1-207ENST00000488921 I3L3M4 83 aa8.95□□□□□ -0.98
SPTLC1-207ENST00000488921 PMCHP20382 165 aa8.95□□□□□ -0.98
SPTLC1-207ENST00000488921 MRPL51Q4U2R6 128 aaKnown RBP8.95□□□□□ -0.98
SPTLC1-207ENST00000488921 C9orf163Q8N9P6 203 aa8.95□□□□□ -0.98
SPTLC1-207ENST00000488921 CIRBP-AS1Q8TBR5 109 aa8.95□□□□□ -0.98
SPTLC1-207ENST00000488921 ST20Q9HBF5 79 aa8.95□□□□□ -0.98
SPTLC1-207ENST00000488921 AP5S1Q9NUS5 200 aa8.95□□□□□ -0.98
SPTLC1-207ENST00000488921 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.94□□□□□ -0.98
SPTLC1-207ENST00000488921 hDV102S1A0JD36 115 aa8.94□□□□□ -0.98
SPTLC1-207ENST00000488921 ZNF25P17030 456 aaPredicted RBP8.94□□□□□ -0.98
SPTLC1-207ENST00000488921 CNBPP62633 177 aaKnown RBP8.94□□□□□ -0.98
SPTLC1-207ENST00000488921 FABP9Q0Z7S8 132 aa8.94□□□□□ -0.98
SPTLC1-207ENST00000488921 RNASEKQ6P5S7 137 aaKnown RBP8.94□□□□□ -0.98
SPTLC1-207ENST00000488921 RNF185Q96GF1 192 aa8.94□□□□□ -0.98
SPTLC1-207ENST00000488921 YPEL4Q96NS1 127 aa8.94□□□□□ -0.98
SPTLC1-207ENST00000488921 MYCBP2O75592 4640 aa8.93□□□□□ -0.98
SPTLC1-207ENST00000488921 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.93□□□□□ -0.98
SPTLC1-207ENST00000488921 IGKV2-29A2NJV5 120 aaPredicted RBP8.93□□□□□ -0.98
SPTLC1-207ENST00000488921 RPS10P46783 165 aaKnown RBP8.93□□□□□ -0.98
SPTLC1-207ENST00000488921 ORMDL3Q8N138 153 aa8.93□□□□□ -0.98
SPTLC1-207ENST00000488921 MRPL18Q9H0U6 180 aaKnown RBP8.93□□□□□ -0.98
SPTLC1-207ENST00000488921 IGKV3OR2-268A0A0C4DH90 116 aa8.92□□□□□ -0.98
SPTLC1-207ENST00000488921 COLCA2A8K830 154 aa8.92□□□□□ -0.98
SPTLC1-207ENST00000488921 D6R8Y8 96 aa8.92□□□□□ -0.98
SPTLC1-207ENST00000488921 FGF6P10767 208 aa8.92□□□□□ -0.98
SPTLC1-207ENST00000488921 RAB5AP20339 215 aa8.92□□□□□ -0.98
SPTLC1-207ENST00000488921 CFAP161Q6P656 301 aa8.92□□□□□ -0.98
SPTLC1-207ENST00000488921 TMEM101Q96IK0 257 aa8.92□□□□□ -0.98
SPTLC1-207ENST00000488921 SMKR1H3BMG3 65 aa8.91□□□□□ -0.98
SPTLC1-207ENST00000488921 PRELID3AQ96N28 172 aa8.91□□□□□ -0.98
SPTLC1-207ENST00000488921 LAMTOR2Q9Y2Q5 125 aa8.91□□□□□ -0.98
SPTLC1-207ENST00000488921 DMBT1Q9UGM3 2413 aaPredicted RBP8.9□□□□□ -0.98
SPTLC1-207ENST00000488921 GAGE12HA6NDE8 117 aa8.9□□□□□ -0.98
SPTLC1-207ENST00000488921 KIAA1644Q3SXP7 199 aa8.9□□□□□ -0.98
SPTLC1-207ENST00000488921 OR5A1Q8NGJ0 315 aa8.9□□□□□ -0.98
SPTLC1-207ENST00000488921 FLG2Q5D862 2391 aaPredicted RBP8.89□□□□□ -0.99
SPTLC1-207ENST00000488921 IGHV3-64A0A075B6Q5 118 aa8.89□□□□□ -0.99
SPTLC1-207ENST00000488921 TRBV27A0A0K0K1C4 114 aa8.89□□□□□ -0.99
SPTLC1-207ENST00000488921 PHOX2AO14813 284 aa8.89□□□□□ -0.99
SPTLC1-207ENST00000488921 TNFRSF6BO95407 300 aa8.89□□□□□ -0.99
SPTLC1-207ENST00000488921 TSHBP01222 138 aa8.89□□□□□ -0.99
SPTLC1-207ENST00000488921 ESDP10768 282 aa8.89□□□□□ -0.99
SPTLC1-207ENST00000488921 POLR2KP53803 58 aaKnown RBP8.89□□□□□ -0.99
SPTLC1-207ENST00000488921 SMAGPQ0VAQ4 97 aa8.89□□□□□ -0.99
SPTLC1-207ENST00000488921 LCE2AQ5TA79 106 aaPredicted RBP8.89□□□□□ -0.99
SPTLC1-207ENST00000488921 CHCHD10Q8WYQ3 142 aaPredicted RBP8.89□□□□□ -0.99
SPTLC1-207ENST00000488921 C20orf78Q9BR46 151 aa8.89□□□□□ -0.99
SPTLC1-207ENST00000488921 VCYO14598 125 aa8.88□□□□□ -0.99
SPTLC1-207ENST00000488921 GAS8-AS1O95177 125 aa8.88□□□□□ -0.99
SPTLC1-207ENST00000488921 C15orf56Q8N910 161 aa8.88□□□□□ -0.99
SPTLC1-207ENST00000488921 MAP1LC3AQ9H492 121 aa8.88□□□□□ -0.99
SPTLC1-207ENST00000488921 J3QL48 77 aa8.87□□□□□ -0.99
SPTLC1-207ENST00000488921 FCER1GP30273 86 aa8.87□□□□□ -0.99
SPTLC1-207ENST00000488921 SUMO2P61956 95 aaKnown RBP8.87□□□□□ -0.99
SPTLC1-207ENST00000488921 SDIM1Q6ZPB5 146 aa8.87□□□□□ -0.99
SPTLC1-207ENST00000488921 MRPL52Q86TS9 123 aaKnown RBP8.87□□□□□ -0.99
SPTLC1-207ENST00000488921 NRACQ8N912 160 aa8.87□□□□□ -0.99
SPTLC1-207ENST00000488921 HERC1Q15751 4861 aa8.86□□□□□ -0.99
SPTLC1-207ENST00000488921 NPYP01303 97 aa8.86□□□□□ -0.99
SPTLC1-207ENST00000488921 TRGC2P03986 189 aa8.86□□□□□ -0.99
SPTLC1-207ENST00000488921 RPL37AP61513 92 aaKnown RBP8.86□□□□□ -0.99
SPTLC1-207ENST00000488921 KIR2DL4Q99706 377 aa8.86□□□□□ -0.99
SPTLC1-207ENST00000488921 ALKBH7Q9BT30 221 aaPredicted RBP8.86□□□□□ -0.99
SPTLC1-207ENST00000488921 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.86□□□□□ -0.99
SPTLC1-207ENST00000488921 GVQW2A0A096LPI5 108 aaPredicted RBP8.85□□□□□ -0.99
SPTLC1-207ENST00000488921 LOC389332A0A1B0GUA5 103 aa8.85□□□□□ -0.99
SPTLC1-207ENST00000488921 TCAPO15273 167 aa8.85□□□□□ -0.99
SPTLC1-207ENST00000488921 CIRBPQ14011 172 aaKnown RBP8.85□□□□□ -0.99
SPTLC1-207ENST00000488921 SS18Q15532 418 aa8.85□□□□□ -0.99
SPTLC1-207ENST00000488921 PRSS3P2Q8NHM4 247 aa8.85□□□□□ -0.99
SPTLC1-207ENST00000488921 LINC00959A0A1B0GUT2 108 aa8.84□□□□□ -0.99
SPTLC1-207ENST00000488921 SLPIP03973 132 aa8.84□□□□□ -0.99
SPTLC1-207ENST00000488921 XCL1P47992 114 aa8.84□□□□□ -0.99
SPTLC1-207ENST00000488921 KRTAP10-4P60372 401 aaPredicted RBP8.84□□□□□ -0.99
SPTLC1-207ENST00000488921 RPL32P62910 135 aaKnown RBP8.84□□□□□ -0.99
SPTLC1-207ENST00000488921 FOXI1Q12951 378 aa8.84□□□□□ -0.99
SPTLC1-207ENST00000488921 HIGD2BQ4VC39 106 aa8.84□□□□□ -0.99
SPTLC1-207ENST00000488921 ZNF664Q8N3J9 261 aa8.84□□□□□ -0.99
SPTLC1-207ENST00000488921 NXT2Q9NPJ8 142 aaKnown RBP8.84□□□□□ -0.99
SPTLC1-207ENST00000488921 CDC42SE2Q9NRR3 84 aa8.84□□□□□ -0.99
SPTLC1-207ENST00000488921 PKIGQ9Y2B9 76 aa8.84□□□□□ -0.99
SPTLC1-207ENST00000488921 PKHD1L1Q86WI1 4243 aa8.83□□□□□ -1
SPTLC1-207ENST00000488921 PRSS47A8MTI9 375 aa8.83□□□□□ -1
SPTLC1-207ENST00000488921 KRTAP29-1A8MX34 341 aaPredicted RBP8.83□□□□□ -1
SPTLC1-207ENST00000488921 CCL25O15444 150 aa8.83□□□□□ -1
SPTLC1-207ENST00000488921 TMEM18Q96B42 140 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms