RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 TRBV27A0A0K0K1C4 114 aa7.59□□□□□ -1.19
CCHCR1-215ENST00000488920 LINC00959A0A1B0GUT2 108 aa7.59□□□□□ -1.19
CCHCR1-215ENST00000488920 OXTP01178 125 aa7.59□□□□□ -1.19
CCHCR1-215ENST00000488920 RPL23P62829 140 aaKnown RBP7.59□□□□□ -1.19
CCHCR1-215ENST00000488920 SRSF3P84103 164 aaKnown RBP7.59□□□□□ -1.19
CCHCR1-215ENST00000488920 COX6A2Q02221 97 aa7.59□□□□□ -1.19
CCHCR1-215ENST00000488920 ADIRFQ15847 76 aa7.59□□□□□ -1.19
CCHCR1-215ENST00000488920 FAM74A3Q4VXF1 159 aa7.59□□□□□ -1.19
CCHCR1-215ENST00000488920 VCYO14598 125 aa7.58□□□□□ -1.2
CCHCR1-215ENST00000488920 CCL25O15444 150 aa7.58□□□□□ -1.2
CCHCR1-215ENST00000488920 PRSS3P2Q8NHM4 247 aa7.58□□□□□ -1.2
CCHCR1-215ENST00000488920 SPACA4Q8TDM5 124 aa7.58□□□□□ -1.2
CCHCR1-215ENST00000488920 CDC42SE2Q9NRR3 84 aa7.58□□□□□ -1.2
CCHCR1-215ENST00000488920 NAT8BQ9UHF3 227 aa7.58□□□□□ -1.2
CCHCR1-215ENST00000488920 GVQW2A0A096LPI5 108 aaPredicted RBP7.57□□□□□ -1.2
CCHCR1-215ENST00000488920 FCER1GP30273 86 aa7.57□□□□□ -1.2
CCHCR1-215ENST00000488920 PEA15Q15121 130 aa7.57□□□□□ -1.2
CCHCR1-215ENST00000488920 MRPL52Q86TS9 123 aaKnown RBP7.57□□□□□ -1.2
CCHCR1-215ENST00000488920 ZNF664Q8N3J9 261 aa7.57□□□□□ -1.2
CCHCR1-215ENST00000488920 NRACQ8N912 160 aa7.57□□□□□ -1.2
CCHCR1-215ENST00000488920 LINC00526Q96FQ7 95 aa7.57□□□□□ -1.2
CCHCR1-215ENST00000488920 NAT8Q9UHE5 227 aa7.57□□□□□ -1.2
CCHCR1-215ENST00000488920 IGKV2-24A0A0C4DH68 120 aa7.56□□□□□ -1.2
CCHCR1-215ENST00000488920 SMIM27A0A1W2PRY6 76 aa7.56□□□□□ -1.2
CCHCR1-215ENST00000488920 C7orf77A4D0Y5 90 aa7.56□□□□□ -1.2
CCHCR1-215ENST00000488920 CAMPP49913 170 aa7.56□□□□□ -1.2
CCHCR1-215ENST00000488920 SS18Q15532 418 aa7.56□□□□□ -1.2
CCHCR1-215ENST00000488920 MAJINQ3KP22 176 aa7.56□□□□□ -1.2
CCHCR1-215ENST00000488920 MRPL51Q4U2R6 128 aaKnown RBP7.56□□□□□ -1.2
CCHCR1-215ENST00000488920 PKHD1L1Q86WI1 4243 aa7.56□□□□□ -1.2
CCHCR1-215ENST00000488920 IGHV1-58A0A0C4DH39 117 aa7.55□□□□□ -1.2
CCHCR1-215ENST00000488920 PPP1R17O96001 155 aa7.55□□□□□ -1.2
CCHCR1-215ENST00000488920 SUMO2P61956 95 aaKnown RBP7.55□□□□□ -1.2
CCHCR1-215ENST00000488920 FAM104BQ5XKR9 115 aa7.55□□□□□ -1.2
CCHCR1-215ENST00000488920 PLAC8Q9NZF1 115 aa7.55□□□□□ -1.2
CCHCR1-215ENST00000488920 FAT3Q8TDW7 4589 aa7.55□□□□□ -1.2
CCHCR1-215ENST00000488920 RNASE13Q5GAN3 156 aaKnown RBP7.54□□□□□ -1.2
CCHCR1-215ENST00000488920 CD164L2Q6UWJ8 174 aa7.54□□□□□ -1.2
CCHCR1-215ENST00000488920 KIR2DL4Q99706 377 aa7.54□□□□□ -1.2
CCHCR1-215ENST00000488920 PHOX2AO14813 284 aa7.53□□□□□ -1.2
CCHCR1-215ENST00000488920 CKS2P33552 79 aa7.53□□□□□ -1.2
CCHCR1-215ENST00000488920 STPG4Q8N801 248 aa7.53□□□□□ -1.2
CCHCR1-215ENST00000488920 UBE2D4Q9Y2X8 147 aa7.53□□□□□ -1.2
CCHCR1-215ENST00000488920 A0A096LNI7 61 aa7.52□□□□□ -1.21
CCHCR1-215ENST00000488920 A0A1B0GW15 77 aa7.52□□□□□ -1.21
CCHCR1-215ENST00000488920 C1orf196B1AJZ1 125 aa7.52□□□□□ -1.21
CCHCR1-215ENST00000488920 PPP1R2P9O14990 202 aa7.52□□□□□ -1.21
CCHCR1-215ENST00000488920 SERTAD4-AS1Q5TG53 156 aa7.52□□□□□ -1.21
CCHCR1-215ENST00000488920 MRPL54Q6P161 138 aaKnown RBP7.52□□□□□ -1.21
CCHCR1-215ENST00000488920 C7orf33Q8WU49 177 aa7.52□□□□□ -1.21
CCHCR1-215ENST00000488920 C20orf78Q9BR46 151 aa7.52□□□□□ -1.21
CCHCR1-215ENST00000488920 SMDT1Q9H4I9 107 aa7.52□□□□□ -1.21
CCHCR1-215ENST00000488920 CSDC2Q9Y534 153 aaKnown RBP7.52□□□□□ -1.21
CCHCR1-215ENST00000488920 TRBV24-1A0A075B6N3 115 aa7.51□□□□□ -1.21
CCHCR1-215ENST00000488920 TRAV13-1A0A0B4J241 112 aa7.51□□□□□ -1.21
CCHCR1-215ENST00000488920 LINC00862A6NCI5 91 aa7.51□□□□□ -1.21
CCHCR1-215ENST00000488920 ZNF561-AS1K7EIQ3 104 aa7.51□□□□□ -1.21
CCHCR1-215ENST00000488920 TNFRSF6BO95407 300 aa7.51□□□□□ -1.21
CCHCR1-215ENST00000488920 MALP21145 153 aa7.51□□□□□ -1.21
CCHCR1-215ENST00000488920 SYCNQ0VAF6 134 aa7.51□□□□□ -1.21
CCHCR1-215ENST00000488920 SMAGPQ0VAQ4 97 aa7.51□□□□□ -1.21
CCHCR1-215ENST00000488920 CARD19Q96LW7 228 aa7.51□□□□□ -1.21
CCHCR1-215ENST00000488920 COX7A2LO14548 114 aa7.5□□□□□ -1.21
CCHCR1-215ENST00000488920 Q6ZRU5 148 aa7.5□□□□□ -1.21
CCHCR1-215ENST00000488920 Q6ZUT4 128 aa7.5□□□□□ -1.21
CCHCR1-215ENST00000488920 IGLV4-69A0A075B6H9 119 aa7.49□□□□□ -1.21
CCHCR1-215ENST00000488920 A0A1B0GXF2 115 aa7.49□□□□□ -1.21
CCHCR1-215ENST00000488920 D6R8Y8 96 aa7.49□□□□□ -1.21
CCHCR1-215ENST00000488920 F8W036 122 aa7.49□□□□□ -1.21
CCHCR1-215ENST00000488920 S100A8P05109 93 aa7.49□□□□□ -1.21
CCHCR1-215ENST00000488920 RPL39P62891 51 aaKnown RBP7.49□□□□□ -1.21
CCHCR1-215ENST00000488920 HBBP68871 147 aa7.49□□□□□ -1.21
CCHCR1-215ENST00000488920 C5orf38Q86SI9 138 aa7.49□□□□□ -1.21
CCHCR1-215ENST00000488920 TMEM18Q96B42 140 aa7.49□□□□□ -1.21
CCHCR1-215ENST00000488920 TIMM21Q9BVV7 248 aa7.49□□□□□ -1.21
CCHCR1-215ENST00000488920 LINC00474Q9P2X8 69 aa7.49□□□□□ -1.21
CCHCR1-215ENST00000488920 HMCN2Q8NDA2 5059 aa7.49□□□□□ -1.21
CCHCR1-215ENST00000488920 NPYP01303 97 aa7.48□□□□□ -1.21
CCHCR1-215ENST00000488920 MT1HL1P0DM35 61 aa7.48□□□□□ -1.21
CCHCR1-215ENST00000488920 RPL32P62910 135 aaKnown RBP7.48□□□□□ -1.21
CCHCR1-215ENST00000488920 SMIM2Q9BVW6 85 aa7.48□□□□□ -1.21
CCHCR1-215ENST00000488920 TCAPO15273 167 aa7.47□□□□□ -1.21
CCHCR1-215ENST00000488920 GAGE2BQ13066 116 aa7.47□□□□□ -1.21
CCHCR1-215ENST00000488920 FAM104AQ969W3 186 aa7.47□□□□□ -1.21
CCHCR1-215ENST00000488920 OPRPNQ99935 248 aaPredicted RBP7.47□□□□□ -1.21
CCHCR1-215ENST00000488920 PKIGQ9Y2B9 76 aa7.47□□□□□ -1.21
CCHCR1-215ENST00000488920 PPBPP02775 128 aa7.46□□□□□ -1.22
CCHCR1-215ENST00000488920 PRR3P79522 188 aaKnown RBP7.46□□□□□ -1.22
CCHCR1-215ENST00000488920 CAMK2N2Q96S95 79 aa7.46□□□□□ -1.22
CCHCR1-215ENST00000488920 LOC107984640A0A0U1RRK4 108 aa7.45□□□□□ -1.22
CCHCR1-215ENST00000488920 PTTG1IPP53801 180 aa7.45□□□□□ -1.22
CCHCR1-215ENST00000488920 TMEM136Q6ZRR5 245 aa7.45□□□□□ -1.22
CCHCR1-215ENST00000488920 SPANXA1Q9NS26 97 aa7.45□□□□□ -1.22
CCHCR1-215ENST00000488920 PLA2G2DQ9UNK4 145 aa7.45□□□□□ -1.22
CCHCR1-215ENST00000488920 A0A0J9YXV3 536 aa7.44□□□□□ -1.22
CCHCR1-215ENST00000488920 APOMO95445 188 aa7.44□□□□□ -1.22
CCHCR1-215ENST00000488920 RAB5AP20339 215 aa7.44□□□□□ -1.22
CCHCR1-215ENST00000488920 ATP5L2Q7Z4Y8 100 aa7.44□□□□□ -1.22
CCHCR1-215ENST00000488920 ORMDL3Q8N138 153 aa7.44□□□□□ -1.22
CCHCR1-215ENST00000488920 C2orf48Q96LS8 159 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms