RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 CDC42SE2Q9NRR3 84 aa10.33□□□□□ -0.76
CTDSP1-209ENST00000488627 GAGE12HA6NDE8 117 aa10.32□□□□□ -0.76
CTDSP1-209ENST00000488627 NPYP01303 97 aa10.32□□□□□ -0.76
CTDSP1-209ENST00000488627 OR5A1Q8NGJ0 315 aa10.32□□□□□ -0.76
CTDSP1-209ENST00000488627 BTF3L4Q96K17 158 aa10.32□□□□□ -0.76
CTDSP1-209ENST00000488627 KIR2DL4Q99706 377 aa10.32□□□□□ -0.76
CTDSP1-209ENST00000488627 PPBPP02775 128 aa10.31□□□□□ -0.76
CTDSP1-209ENST00000488627 SLPIP03973 132 aa10.31□□□□□ -0.76
CTDSP1-209ENST00000488627 FCER1GP30273 86 aa10.31□□□□□ -0.76
CTDSP1-209ENST00000488627 C9orf163Q8N9P6 203 aa10.31□□□□□ -0.76
CTDSP1-209ENST00000488627 TMEM101Q96IK0 257 aa10.31□□□□□ -0.76
CTDSP1-209ENST00000488627 LINC00959A0A1B0GUT2 108 aa10.3□□□□□ -0.76
CTDSP1-209ENST00000488627 PHOX2AO14813 284 aa10.3□□□□□ -0.76
CTDSP1-209ENST00000488627 Q5VSD8 79 aa10.3□□□□□ -0.76
CTDSP1-209ENST00000488627 UBE2D4Q9Y2X8 147 aa10.3□□□□□ -0.76
CTDSP1-209ENST00000488627 CSDC2Q9Y534 153 aaKnown RBP10.3□□□□□ -0.76
CTDSP1-209ENST00000488627 CNBPP62633 177 aaKnown RBP10.29□□□□□ -0.76
CTDSP1-209ENST00000488627 FOXI1Q12951 378 aa10.29□□□□□ -0.76
CTDSP1-209ENST00000488627 TMEM136Q6ZRR5 245 aa10.29□□□□□ -0.76
CTDSP1-209ENST00000488627 SCXQ7RTU7 201 aa10.29□□□□□ -0.76
CTDSP1-209ENST00000488627 ZNF664Q8N3J9 261 aa10.29□□□□□ -0.76
CTDSP1-209ENST00000488627 C15orf56Q8N910 161 aa10.29□□□□□ -0.76
CTDSP1-209ENST00000488627 CHAC1Q9BUX1 264 aa10.29□□□□□ -0.76
CTDSP1-209ENST00000488627 SMIM2Q9BVW6 85 aa10.29□□□□□ -0.76
CTDSP1-209ENST00000488627 hDV102S1A0JD36 115 aa10.28□□□□□ -0.76
CTDSP1-209ENST00000488627 SDIM1Q6ZPB5 146 aa10.28□□□□□ -0.76
CTDSP1-209ENST00000488627 ORMDL3Q8N138 153 aa10.28□□□□□ -0.76
CTDSP1-209ENST00000488627 FAM104AQ969W3 186 aa10.28□□□□□ -0.76
CTDSP1-209ENST00000488627 SEC11CQ9BY50 192 aa10.28□□□□□ -0.76
CTDSP1-209ENST00000488627 PRSS47A8MTI9 375 aa10.27□□□□□ -0.77
CTDSP1-209ENST00000488627 IMMP2LQ96T52 175 aa10.27□□□□□ -0.77
CTDSP1-209ENST00000488627 TIMM21Q9BVV7 248 aa10.27□□□□□ -0.77
CTDSP1-209ENST00000488627 VPS13BQ7Z7G8 4022 aa10.27□□□□□ -0.77
CTDSP1-209ENST00000488627 TCAPO15273 167 aa10.26□□□□□ -0.77
CTDSP1-209ENST00000488627 CCL25O15444 150 aa10.26□□□□□ -0.77
CTDSP1-209ENST00000488627 XCL1P47992 114 aa10.26□□□□□ -0.77
CTDSP1-209ENST00000488627 CFAP161Q6P656 301 aa10.26□□□□□ -0.77
CTDSP1-209ENST00000488627 COMMD7Q86VX2 200 aa10.26□□□□□ -0.77
CTDSP1-209ENST00000488627 CIRBP-AS1Q8TBR5 109 aa10.26□□□□□ -0.77
CTDSP1-209ENST00000488627 PRELID3AQ96N28 172 aa10.26□□□□□ -0.77
CTDSP1-209ENST00000488627 RPL39P62891 51 aaKnown RBP10.25□□□□□ -0.77
CTDSP1-209ENST00000488627 CTDSP1Q9GZU7 261 aa10.25□□□□□ -0.77
CTDSP1-209ENST00000488627 FAM229AH3BQW9 127 aa10.24□□□□□ -0.77
CTDSP1-209ENST00000488627 SS18Q15532 418 aa10.24□□□□□ -0.77
CTDSP1-209ENST00000488627 RNASE13Q5GAN3 156 aaKnown RBP10.24□□□□□ -0.77
CTDSP1-209ENST00000488627 C10orf91Q5T1B1 145 aa10.24□□□□□ -0.77
CTDSP1-209ENST00000488627 CD164L2Q6UWJ8 174 aa10.24□□□□□ -0.77
CTDSP1-209ENST00000488627 TMEM18Q96B42 140 aa10.24□□□□□ -0.77
CTDSP1-209ENST00000488627 AP5S1Q9NUS5 200 aa10.24□□□□□ -0.77
CTDSP1-209ENST00000488627 LAMTOR2Q9Y2Q5 125 aa10.24□□□□□ -0.77
CTDSP1-209ENST00000488627 GVQW2A0A096LPI5 108 aaPredicted RBP10.23□□□□□ -0.77
CTDSP1-209ENST00000488627 PANO1I0J062 215 aa10.23□□□□□ -0.77
CTDSP1-209ENST00000488627 SMAGPQ0VAQ4 97 aa10.23□□□□□ -0.77
CTDSP1-209ENST00000488627 HIGD2BQ4VC39 106 aa10.23□□□□□ -0.77
CTDSP1-209ENST00000488627 Q6ZUT4 128 aa10.23□□□□□ -0.77
CTDSP1-209ENST00000488627 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.23□□□□□ -0.77
CTDSP1-209ENST00000488627 C1orf196B1AJZ1 125 aa10.21□□□□□ -0.77
CTDSP1-209ENST00000488627 INAFM2P0DMQ5 153 aa10.21□□□□□ -0.77
CTDSP1-209ENST00000488627 LINC00528Q8N1L1 170 aa10.21□□□□□ -0.77
CTDSP1-209ENST00000488627 OPRPNQ99935 248 aaPredicted RBP10.21□□□□□ -0.77
CTDSP1-209ENST00000488627 SPANXA1Q9NS26 97 aa10.21□□□□□ -0.77
CTDSP1-209ENST00000488627 CARHSP1Q9Y2V2 147 aaKnown RBP10.21□□□□□ -0.77
CTDSP1-209ENST00000488627 TRAV9-1A0A075B6T8 112 aa10.2□□□□□ -0.78
CTDSP1-209ENST00000488627 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.2□□□□□ -0.78
CTDSP1-209ENST00000488627 TRAV13-1A0A0B4J241 112 aa10.2□□□□□ -0.78
CTDSP1-209ENST00000488627 LOC389332A0A1B0GUA5 103 aa10.2□□□□□ -0.78
CTDSP1-209ENST00000488627 MRPS36P82909 103 aaKnown RBP10.2□□□□□ -0.78
CTDSP1-209ENST00000488627 CIRBPQ14011 172 aaKnown RBP10.2□□□□□ -0.78
CTDSP1-209ENST00000488627 IGHV3-64A0A075B6Q5 118 aa10.19□□□□□ -0.78
CTDSP1-209ENST00000488627 IGHV1-58A0A0C4DH39 117 aa10.19□□□□□ -0.78
CTDSP1-209ENST00000488627 RAB5AP20339 215 aa10.19□□□□□ -0.78
CTDSP1-209ENST00000488627 MAP1LC3AQ9H492 121 aa10.19□□□□□ -0.78
CTDSP1-209ENST00000488627 SRRM2Q9UQ35 2752 aaKnown RBP10.19□□□□□ -0.78
CTDSP1-209ENST00000488627 KRTAP10-4P60372 401 aaPredicted RBP10.18□□□□□ -0.78
CTDSP1-209ENST00000488627 Q8N8P6 123 aa10.18□□□□□ -0.78
CTDSP1-209ENST00000488627 LINC00526Q96FQ7 95 aa10.17□□□□□ -0.78
CTDSP1-209ENST00000488627 PYGO1Q9Y3Y4 419 aa10.17□□□□□ -0.78
CTDSP1-209ENST00000488627 COX7A2LO14548 114 aa10.16□□□□□ -0.78
CTDSP1-209ENST00000488627 PLA2G1BP04054 148 aaKnown RBP10.16□□□□□ -0.78
CTDSP1-209ENST00000488627 CHTF8P0CG12 524 aa10.16□□□□□ -0.78
CTDSP1-209ENST00000488627 KIAA1644Q3SXP7 199 aa10.16□□□□□ -0.78
CTDSP1-209ENST00000488627 COX6A2Q02221 97 aa10.15□□□□□ -0.78
CTDSP1-209ENST00000488627 C5orf38Q86SI9 138 aa10.15□□□□□ -0.78
CTDSP1-209ENST00000488627 PRSS3P2Q8NHM4 247 aa10.15□□□□□ -0.78
CTDSP1-209ENST00000488627 GNB1LQ9BYB4 327 aa10.15□□□□□ -0.78
CTDSP1-209ENST00000488627 FLG2Q5D862 2391 aaPredicted RBP10.15□□□□□ -0.79
CTDSP1-209ENST00000488627 IGLV4-3A0A075B6K6 122 aa10.14□□□□□ -0.79
CTDSP1-209ENST00000488627 IGHV3OR16-9A0A0B4J2B5 98 aa10.14□□□□□ -0.79
CTDSP1-209ENST00000488627 S100PP25815 95 aa10.14□□□□□ -0.79
CTDSP1-209ENST00000488627 IFI27P40305 119 aaPredicted RBP10.14□□□□□ -0.79
CTDSP1-209ENST00000488627 RHEBQ15382 184 aa10.14□□□□□ -0.79
CTDSP1-209ENST00000488627 SPACA4Q8TDM5 124 aa10.14□□□□□ -0.79
CTDSP1-209ENST00000488627 NXT2Q9NPJ8 142 aaKnown RBP10.14□□□□□ -0.79
CTDSP1-209ENST00000488627 RPS10P5Q9NQ39 176 aa10.14□□□□□ -0.79
CTDSP1-209ENST00000488627 MYCBP2O75592 4640 aa10.13□□□□□ -0.79
CTDSP1-209ENST00000488627 K7EMI3 77 aa10.13□□□□□ -0.79
CTDSP1-209ENST00000488627 MALP21145 153 aa10.13□□□□□ -0.79
CTDSP1-209ENST00000488627 C2orf66Q6UXQ4 117 aa10.13□□□□□ -0.79
CTDSP1-209ENST00000488627 IGLV4-69A0A075B6H9 119 aa10.12□□□□□ -0.79
CTDSP1-209ENST00000488627 A0A087WYN8 130 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms