RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 XCL1P47992 114 aa12.01□□□□□ -0.49
SMPDL3A-202ENST00000487215 FOXA3P55318 350 aaPredicted RBP12.01□□□□□ -0.49
SMPDL3A-202ENST00000487215 AKAP14Q86UN6 197 aa12.01□□□□□ -0.49
SMPDL3A-202ENST00000487215 TMEM101Q96IK0 257 aa12.01□□□□□ -0.49
SMPDL3A-202ENST00000487215 BTF3L4Q96K17 158 aa12.01□□□□□ -0.49
SMPDL3A-202ENST00000487215 CARD19Q96LW7 228 aa12.01□□□□□ -0.49
SMPDL3A-202ENST00000487215 IGHV1-58A0A0C4DH39 117 aa12□□□□□ -0.49
SMPDL3A-202ENST00000487215 OR5A1Q8NGJ0 315 aa12□□□□□ -0.49
SMPDL3A-202ENST00000487215 TRBV6-5A0A0K0K1A5 114 aa11.99□□□□□ -0.49
SMPDL3A-202ENST00000487215 ALKAL2Q6UX46 152 aa11.99□□□□□ -0.49
SMPDL3A-202ENST00000487215 CCL25O15444 150 aa11.98□□□□□ -0.49
SMPDL3A-202ENST00000487215 CEBPGP53567 150 aa11.98□□□□□ -0.49
SMPDL3A-202ENST00000487215 ST20Q9HBF5 79 aa11.98□□□□□ -0.49
SMPDL3A-202ENST00000487215 LINC00959A0A1B0GUT2 108 aa11.97□□□□□ -0.49
SMPDL3A-202ENST00000487215 A0A1B0GUT8 65 aa11.97□□□□□ -0.49
SMPDL3A-202ENST00000487215 FAM231BA6NCW3 169 aa11.97□□□□□ -0.49
SMPDL3A-202ENST00000487215 EIF5A2Q9GZV4 153 aaKnown RBP11.97□□□□□ -0.49
SMPDL3A-202ENST00000487215 PTTG1IPP53801 180 aa11.96□□□□□ -0.49
SMPDL3A-202ENST00000487215 SYCNQ0VAF6 134 aa11.96□□□□□ -0.49
SMPDL3A-202ENST00000487215 TSKUQ8WUA8 353 aa11.96□□□□□ -0.49
SMPDL3A-202ENST00000487215 MRAP2Q96G30 205 aa11.96□□□□□ -0.49
SMPDL3A-202ENST00000487215 SMIM7Q9BQ49 75 aa11.96□□□□□ -0.49
SMPDL3A-202ENST00000487215 TMEM191AQ9H0A3 160 aa11.96□□□□□ -0.49
SMPDL3A-202ENST00000487215 HIGD1CA8MV81 97 aa11.94□□□□□ -0.5
SMPDL3A-202ENST00000487215 ZNF561-AS1K7EIQ3 104 aa11.94□□□□□ -0.5
SMPDL3A-202ENST00000487215 OSTCQ9NRP0 149 aa11.94□□□□□ -0.5
SMPDL3A-202ENST00000487215 ZNF727A8MUV8 499 aa11.93□□□□□ -0.5
SMPDL3A-202ENST00000487215 PPP1R17O96001 155 aa11.93□□□□□ -0.5
SMPDL3A-202ENST00000487215 ESDP10768 282 aa11.93□□□□□ -0.5
SMPDL3A-202ENST00000487215 SMAGPQ0VAQ4 97 aa11.93□□□□□ -0.5
SMPDL3A-202ENST00000487215 GAGE2BQ13066 116 aa11.93□□□□□ -0.5
SMPDL3A-202ENST00000487215 SS18Q15532 418 aa11.93□□□□□ -0.5
SMPDL3A-202ENST00000487215 LINC01551Q86U37 167 aa11.93□□□□□ -0.5
SMPDL3A-202ENST00000487215 A0A1W2PNN7 141 aa11.92□□□□□ -0.5
SMPDL3A-202ENST00000487215 CAMPP49913 170 aa11.92□□□□□ -0.5
SMPDL3A-202ENST00000487215 CD164L2Q6UWJ8 174 aa11.92□□□□□ -0.5
SMPDL3A-202ENST00000487215 TRBV27A0A0K0K1C4 114 aa11.91□□□□□ -0.5
SMPDL3A-202ENST00000487215 LOC107984640A0A0U1RRK4 108 aa11.91□□□□□ -0.5
SMPDL3A-202ENST00000487215 TSHBP01222 138 aa11.91□□□□□ -0.5
SMPDL3A-202ENST00000487215 POLR2KP53803 58 aaKnown RBP11.91□□□□□ -0.5
SMPDL3A-202ENST00000487215 RIGQ13278 110 aa11.91□□□□□ -0.5
SMPDL3A-202ENST00000487215 MRPL52Q86TS9 123 aaKnown RBP11.91□□□□□ -0.5
SMPDL3A-202ENST00000487215 TMEM242Q9NWH2 141 aa11.91□□□□□ -0.5
SMPDL3A-202ENST00000487215 PSORS1C2Q9UIG4 136 aa11.91□□□□□ -0.5
SMPDL3A-202ENST00000487215 C7orf77A4D0Y5 90 aa11.9□□□□□ -0.5
SMPDL3A-202ENST00000487215 RAB4AP20338 218 aa11.9□□□□□ -0.5
SMPDL3A-202ENST00000487215 IGLV4-69A0A075B6H9 119 aa11.89□□□□□ -0.51
SMPDL3A-202ENST00000487215 VCYO14598 125 aa11.89□□□□□ -0.51
SMPDL3A-202ENST00000487215 ZNF664Q8N3J9 261 aa11.89□□□□□ -0.51
SMPDL3A-202ENST00000487215 ISOC2Q96AB3 205 aa11.89□□□□□ -0.51
SMPDL3A-202ENST00000487215 CDC42SE2Q9NRR3 84 aa11.89□□□□□ -0.51
SMPDL3A-202ENST00000487215 hCG_2014768A0A024R1R8 64 aa11.88□□□□□ -0.51
SMPDL3A-202ENST00000487215 FCER1GP30273 86 aa11.88□□□□□ -0.51
SMPDL3A-202ENST00000487215 FAM74A3Q4VXF1 159 aa11.88□□□□□ -0.51
SMPDL3A-202ENST00000487215 MT-ND6P03923 174 aa11.87□□□□□ -0.51
SMPDL3A-202ENST00000487215 SRP19P09132 144 aaKnown RBP11.87□□□□□ -0.51
SMPDL3A-202ENST00000487215 C9orf116Q5BN46 136 aaPredicted RBP11.87□□□□□ -0.51
SMPDL3A-202ENST00000487215 AMN1Q8IY45 258 aa11.87□□□□□ -0.51
SMPDL3A-202ENST00000487215 NUP35Q8NFH5 326 aa11.87□□□□□ -0.51
SMPDL3A-202ENST00000487215 PPP1R2P9O14990 202 aa11.86□□□□□ -0.51
SMPDL3A-202ENST00000487215 TMEM241Q24JQ0 296 aa11.86□□□□□ -0.51
SMPDL3A-202ENST00000487215 KIR2DL4Q99706 377 aa11.86□□□□□ -0.51
SMPDL3A-202ENST00000487215 NAT8BQ9UHF3 227 aa11.86□□□□□ -0.51
SMPDL3A-202ENST00000487215 CSDC2Q9Y534 153 aaKnown RBP11.86□□□□□ -0.51
SMPDL3A-202ENST00000487215 C1orf196B1AJZ1 125 aa11.85□□□□□ -0.51
SMPDL3A-202ENST00000487215 APOMO95445 188 aa11.85□□□□□ -0.51
SMPDL3A-202ENST00000487215 C1orf137Q5JT78 98 aa11.85□□□□□ -0.51
SMPDL3A-202ENST00000487215 CAMK2N2Q96S95 79 aa11.85□□□□□ -0.51
SMPDL3A-202ENST00000487215 KRTAP3-3Q9BYR6 98 aa11.85□□□□□ -0.51
SMPDL3A-202ENST00000487215 KRTAP3-2Q9BYR7 98 aa11.85□□□□□ -0.51
SMPDL3A-202ENST00000487215 V9GYV3 84 aa11.85□□□□□ -0.51
SMPDL3A-202ENST00000487215 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.84□□□□□ -0.51
SMPDL3A-202ENST00000487215 MALP21145 153 aa11.84□□□□□ -0.51
SMPDL3A-202ENST00000487215 SUMO2P61956 95 aaKnown RBP11.84□□□□□ -0.51
SMPDL3A-202ENST00000487215 PHF5AQ7RTV0 110 aaKnown RBP11.84□□□□□ -0.51
SMPDL3A-202ENST00000487215 PRR26Q8N8Z3 221 aa11.84□□□□□ -0.51
SMPDL3A-202ENST00000487215 TMEM18Q96B42 140 aa11.84□□□□□ -0.51
SMPDL3A-202ENST00000487215 COX7A2LO14548 114 aa11.83□□□□□ -0.52
SMPDL3A-202ENST00000487215 A0A1B0GW15 77 aa11.82□□□□□ -0.52
SMPDL3A-202ENST00000487215 TCAPO15273 167 aa11.82□□□□□ -0.52
SMPDL3A-202ENST00000487215 RPL18AQ02543 176 aaKnown RBP11.82□□□□□ -0.52
SMPDL3A-202ENST00000487215 LINC00862A6NCI5 91 aa11.81□□□□□ -0.52
SMPDL3A-202ENST00000487215 NRACQ8N912 160 aa11.81□□□□□ -0.52
SMPDL3A-202ENST00000487215 C2orf48Q96LS8 159 aa11.81□□□□□ -0.52
SMPDL3A-202ENST00000487215 SMKR1H3BMG3 65 aa11.8□□□□□ -0.52
SMPDL3A-202ENST00000487215 RPL23P62829 140 aaKnown RBP11.8□□□□□ -0.52
SMPDL3A-202ENST00000487215 FAM104BQ5XKR9 115 aa11.8□□□□□ -0.52
SMPDL3A-202ENST00000487215 DIRC1Q969H9 104 aa11.8□□□□□ -0.52
SMPDL3A-202ENST00000487215 C20orf78Q9BR46 151 aa11.8□□□□□ -0.52
SMPDL3A-202ENST00000487215 NAT8Q9UHE5 227 aa11.8□□□□□ -0.52
SMPDL3A-202ENST00000487215 UBE2D4Q9Y2X8 147 aa11.8□□□□□ -0.52
SMPDL3A-202ENST00000487215 IGLV7-43P04211 117 aa11.79□□□□□ -0.52
SMPDL3A-202ENST00000487215 ADIRFQ15847 76 aa11.79□□□□□ -0.52
SMPDL3A-202ENST00000487215 OPRPNQ99935 248 aaPredicted RBP11.79□□□□□ -0.52
SMPDL3A-202ENST00000487215 TIMM21Q9BVV7 248 aa11.79□□□□□ -0.52
SMPDL3A-202ENST00000487215 MUC2Q02817 5179 aa11.79□□□□□ -0.52
SMPDL3A-202ENST00000487215 SMIM27A0A1W2PRY6 76 aa11.78□□□□□ -0.52
SMPDL3A-202ENST00000487215 S100A8P05109 93 aa11.78□□□□□ -0.52
SMPDL3A-202ENST00000487215 PEA15Q15121 130 aa11.78□□□□□ -0.52
SMPDL3A-202ENST00000487215 RNASE13Q5GAN3 156 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms