RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 PIPP12273 146 aaPredicted RBP-1.15□□□□□ -2.59
SFPQ-209ENST00000485454 NCS1P62166 190 aa-1.15□□□□□ -2.59
SFPQ-209ENST00000485454 UBE2G1P62253 170 aa-1.15□□□□□ -2.59
SFPQ-209ENST00000485454 CCL8P80075 99 aa-1.15□□□□□ -2.59
SFPQ-209ENST00000485454 TFAMQ00059 246 aaKnown RBP-1.15□□□□□ -2.59
SFPQ-209ENST00000485454 AGPAT4-IT1Q9H0P7 198 aa-1.15□□□□□ -2.59
SFPQ-209ENST00000485454 CENPHQ9H3R5 247 aa-1.15□□□□□ -2.59
SFPQ-209ENST00000485454 LINC00472Q9H8W2 130 aa-1.15□□□□□ -2.59
SFPQ-209ENST00000485454 LINC00846Q9NV44 126 aa-1.15□□□□□ -2.59
SFPQ-209ENST00000485454 LINC00312Q9Y6C7 94 aa-1.15□□□□□ -2.59
SFPQ-209ENST00000485454 SBF2Q86WG5 1849 aa-1.15□□□□□ -2.59
SFPQ-209ENST00000485454 ACACAQ13085 2346 aa-1.16□□□□□ -2.59
SFPQ-209ENST00000485454 PDE4DIPQ5VU43 2346 aa-1.16□□□□□ -2.59
SFPQ-209ENST00000485454 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.16□□□□□ -2.598e-17■■■■□ 19.7
SFPQ-209ENST00000485454 DNAH6Q9C0G6 4158 aa-1.16□□□□□ -2.59
SFPQ-209ENST00000485454 GAPVD1Q14C86 1478 aa-1.16□□□□□ -2.59
SFPQ-209ENST00000485454 CEP290O15078 2479 aa-1.16□□□□□ -2.59
SFPQ-209ENST00000485454 CTXND1A0A1B0GTU2 59 aa-1.16□□□□□ -2.6
SFPQ-209ENST00000485454 M0R135 149 aa-1.16□□□□□ -2.6
SFPQ-209ENST00000485454 TNFSF15O95150 251 aa-1.16□□□□□ -2.6
SFPQ-209ENST00000485454 CBLN1P23435 193 aa-1.16□□□□□ -2.6
SFPQ-209ENST00000485454 S100GP29377 79 aa-1.16□□□□□ -2.6
SFPQ-209ENST00000485454 MMGT1Q8N4V1 131 aa-1.16□□□□□ -2.6
SFPQ-209ENST00000485454 SMPXQ9UHP9 88 aa-1.16□□□□□ -2.6
SFPQ-209ENST00000485454 NWD2Q9ULI1 1742 aa-1.16□□□□□ -2.6
SFPQ-209ENST00000485454 MUC17Q685J3 4493 aa-1.17□□□□□ -2.6
SFPQ-209ENST00000485454 DNAH2Q9P225 4427 aa-1.17□□□□□ -2.6
SFPQ-209ENST00000485454 TMEM2Q9UHN6 1383 aa-1.17□□□□□ -2.6
SFPQ-209ENST00000485454 PPP1R17O96001 155 aa-1.17□□□□□ -2.6
SFPQ-209ENST00000485454 MT1HL1P0DM35 61 aa-1.17□□□□□ -2.6
SFPQ-209ENST00000485454 CMPK1P30085 196 aa-1.17□□□□□ -2.6
SFPQ-209ENST00000485454 TMEM170BQ5T4T1 132 aa-1.17□□□□□ -2.6
SFPQ-209ENST00000485454 Q6JHZ5 121 aa-1.17□□□□□ -2.6
SFPQ-209ENST00000485454 DEFB105AQ8NG35 78 aa-1.17□□□□□ -2.6
SFPQ-209ENST00000485454 SPANXA1Q9NS26 97 aa-1.17□□□□□ -2.6
SFPQ-209ENST00000485454 HIGD1AQ9Y241 93 aa-1.17□□□□□ -2.6
SFPQ-209ENST00000485454 KDM5AP29375 1690 aaKnown RBP-1.17□□□□□ -2.6
SFPQ-209ENST00000485454 CHD7Q9P2D1 2997 aa-1.17□□□□□ -2.6
SFPQ-209ENST00000485454 ARHGEF10O15013 1369 aa-1.18□□□□□ -2.6
SFPQ-209ENST00000485454 DEFB135Q30KP9 77 aa-1.18□□□□□ -2.6
SFPQ-209ENST00000485454 MRC1P22897 1456 aa-1.18□□□□□ -2.6
SFPQ-209ENST00000485454 DBIP07108 87 aaKnown RBP-1.19□□□□□ -2.6
SFPQ-209ENST00000485454 MIC13Q5XKP0 118 aa-1.19□□□□□ -2.6
SFPQ-209ENST00000485454 SPTSSBQ8NFR3 76 aa-1.19□□□□□ -2.6
SFPQ-209ENST00000485454 DDA1Q9BW61 102 aa-1.19□□□□□ -2.6
SFPQ-209ENST00000485454 NSD3Q9BZ95 1437 aa-1.19□□□□□ -2.6
SFPQ-209ENST00000485454 HSPB11Q9Y547 144 aa-1.19□□□□□ -2.6
SFPQ-209ENST00000485454 LENEPQ9Y5L5 61 aa-1.19□□□□□ -2.6
SFPQ-209ENST00000485454 V9GYQ6 96 aa-1.19□□□□□ -2.6
SFPQ-209ENST00000485454 NBASA2RRP1 2371 aa-1.19□□□□□ -2.6
SFPQ-209ENST00000485454 CENPEQ02224 2701 aa-1.19□□□□□ -2.6
SFPQ-209ENST00000485454 CDK5RAP2Q96SN8 1893 aa-1.2□□□□□ -2.6
SFPQ-209ENST00000485454 MYH6P13533 1939 aa-1.2□□□□□ -2.6
SFPQ-209ENST00000485454 CASKIN1Q8WXD9 1431 aa-1.2□□□□□ -2.6
SFPQ-209ENST00000485454 PKD1P98161 4303 aa-1.2□□□□□ -2.6
SFPQ-209ENST00000485454 SIX6O95475 246 aa-1.2□□□□□ -2.6
SFPQ-209ENST00000485454 IL5P05113 134 aa-1.2□□□□□ -2.6
SFPQ-209ENST00000485454 G0S2P27469 103 aa-1.2□□□□□ -2.6
SFPQ-209ENST00000485454 GNG10P50151 68 aa-1.2□□□□□ -2.6
SFPQ-209ENST00000485454 SCIMPQ6UWF3 145 aa-1.2□□□□□ -2.6
SFPQ-209ENST00000485454 PSMG3Q9BT73 122 aaPredicted RBP-1.2□□□□□ -2.6
SFPQ-209ENST00000485454 DNAH7Q8WXX0 4024 aa-1.2□□□□□ -2.6
SFPQ-209ENST00000485454 UTP20O75691 2785 aaKnown RBP-1.2□□□□□ -2.6
SFPQ-209ENST00000485454 EYSQ5T1H1 3165 aa-1.2□□□□□ -2.6
SFPQ-209ENST00000485454 ADGRB1O14514 1584 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 ZNF236Q9UL36 1845 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 SPAARA0A1B0GVQ0 90 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 TSTD3H0UI37 97 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 NDUFB6O95139 128 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 APOC3P02656 99 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 TPPP2P59282 170 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 ALX1Q15699 326 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 CCDC153Q494R4 210 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 SPTSSAQ969W0 71 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 AMELXQ99217 191 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 V9GYH0 126 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 IFT140Q96RY7 1462 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 SHANK2Q9UPX8 1470 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 KALRNO60229 2985 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 PKHD1L1Q86WI1 4243 aa-1.21□□□□□ -2.6
SFPQ-209ENST00000485454 SPTAN1Q13813 2472 aaKnown RBP-1.22□□□□□ -2.6
SFPQ-209ENST00000485454 POLA1P09884 1462 aaPredicted RBP-1.22□□□□□ -2.6
SFPQ-209ENST00000485454 UQCR11O14957 56 aa-1.22□□□□□ -2.6
SFPQ-209ENST00000485454 SNCGO76070 127 aa-1.22□□□□□ -2.6
SFPQ-209ENST00000485454 MT1BP07438 61 aa-1.22□□□□□ -2.6
SFPQ-209ENST00000485454 COX8AP10176 69 aa-1.22□□□□□ -2.6
SFPQ-209ENST00000485454 HIST1H1AQ02539 215 aaPredicted RBP-1.22□□□□□ -2.6
SFPQ-209ENST00000485454 MORN2Q502X0 79 aa-1.22□□□□□ -2.6
SFPQ-209ENST00000485454 BAGE2Q86Y30 109 aa-1.22□□□□□ -2.6
SFPQ-209ENST00000485454 AQP10Q96PS8 301 aa-1.22□□□□□ -2.6
SFPQ-209ENST00000485454 GINS2Q9Y248 185 aa-1.22□□□□□ -2.6
SFPQ-209ENST00000485454 KIF21AQ7Z4S6 1674 aa-1.23□□□□□ -2.61
SFPQ-209ENST00000485454 OVOS2A0A0J9YW53 1432 aa-1.23□□□□□ -2.61
SFPQ-209ENST00000485454 OVOS2Q6IE36 1432 aa-1.23□□□□□ -2.61
SFPQ-209ENST00000485454 PIGBOS1A0A0B4J2F0 54 aa-1.23□□□□□ -2.61
SFPQ-209ENST00000485454 TRBV7-4A0A0J9YYF1 115 aa-1.23□□□□□ -2.61
SFPQ-209ENST00000485454 SYS1-DBNDD2H3BUS1 97 aa-1.23□□□□□ -2.61
SFPQ-209ENST00000485454 NCR2O95944 276 aa-1.23□□□□□ -2.61
SFPQ-209ENST00000485454 IFNGP01579 166 aa-1.23□□□□□ -2.61
SFPQ-209ENST00000485454 RRAS2P62070 204 aaPredicted RBP-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms