RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 PRSS3P2Q8NHM4 247 aa12.77□□□□□ -0.37
ACTB-212ENST00000484841 OSTCQ9NRP0 149 aa12.77□□□□□ -0.37
ACTB-212ENST00000484841 PHOX2AO14813 284 aa12.76□□□□□ -0.37
ACTB-212ENST00000484841 TSHBP01222 138 aa12.76□□□□□ -0.37
ACTB-212ENST00000484841 ESDP10768 282 aa12.76□□□□□ -0.37
ACTB-212ENST00000484841 SMAGPQ0VAQ4 97 aa12.76□□□□□ -0.37
ACTB-212ENST00000484841 STPG4Q8N801 248 aa12.76□□□□□ -0.37
ACTB-212ENST00000484841 LINC00474Q9P2X8 69 aa12.76□□□□□ -0.37
ACTB-212ENST00000484841 C7orf77A4D0Y5 90 aa12.75□□□□□ -0.37
ACTB-212ENST00000484841 PPP1R17O96001 155 aa12.75□□□□□ -0.37
ACTB-212ENST00000484841 RAB4AP20338 218 aa12.75□□□□□ -0.37
ACTB-212ENST00000484841 FCER1GP30273 86 aa12.75□□□□□ -0.37
ACTB-212ENST00000484841 ZNF561-AS1K7EIQ3 104 aa12.74□□□□□ -0.37
ACTB-212ENST00000484841 GAS8-AS1O95177 125 aa12.74□□□□□ -0.37
ACTB-212ENST00000484841 AMN1Q8IY45 258 aa12.74□□□□□ -0.37
ACTB-212ENST00000484841 TRBV27A0A0K0K1C4 114 aa12.73□□□□□ -0.37
ACTB-212ENST00000484841 VCYO14598 125 aa12.73□□□□□ -0.37
ACTB-212ENST00000484841 POLR2KP53803 58 aaKnown RBP12.73□□□□□ -0.37
ACTB-212ENST00000484841 MRPL52Q86TS9 123 aaKnown RBP12.73□□□□□ -0.37
ACTB-212ENST00000484841 ZNF664Q8N3J9 261 aa12.73□□□□□ -0.37
ACTB-212ENST00000484841 CARD19Q96LW7 228 aa12.73□□□□□ -0.37
ACTB-212ENST00000484841 CDC42SE2Q9NRR3 84 aa12.73□□□□□ -0.37
ACTB-212ENST00000484841 CD164L2Q6UWJ8 174 aa12.72□□□□□ -0.37
ACTB-212ENST00000484841 A0A096LNI7 61 aa12.71□□□□□ -0.37
ACTB-212ENST00000484841 SRP19P09132 144 aaKnown RBP12.71□□□□□ -0.37
ACTB-212ENST00000484841 MALP21145 153 aa12.71□□□□□ -0.37
ACTB-212ENST00000484841 KIR2DL4Q99706 377 aa12.71□□□□□ -0.37
ACTB-212ENST00000484841 LRP1Q07954 4544 aaKnown RBP12.7□□□□□ -0.38
ACTB-212ENST00000484841 TMEM241Q24JQ0 296 aa12.7□□□□□ -0.38
ACTB-212ENST00000484841 ISOC2Q96AB3 205 aa12.7□□□□□ -0.38
ACTB-212ENST00000484841 LINC00526Q96FQ7 95 aa12.7□□□□□ -0.38
ACTB-212ENST00000484841 NAT8BQ9UHF3 227 aa12.7□□□□□ -0.38
ACTB-212ENST00000484841 PPP1R2P9O14990 202 aa12.69□□□□□ -0.38
ACTB-212ENST00000484841 SYCNQ0VAF6 134 aa12.69□□□□□ -0.38
ACTB-212ENST00000484841 FAM74A3Q4VXF1 159 aa12.69□□□□□ -0.38
ACTB-212ENST00000484841 NUP35Q8NFH5 326 aa12.69□□□□□ -0.38
ACTB-212ENST00000484841 TMEM18Q96B42 140 aa12.69□□□□□ -0.38
ACTB-212ENST00000484841 C1orf196B1AJZ1 125 aa12.68□□□□□ -0.38
ACTB-212ENST00000484841 SMKR1H3BMG3 65 aa12.68□□□□□ -0.38
ACTB-212ENST00000484841 SUMO2P61956 95 aaKnown RBP12.68□□□□□ -0.38
ACTB-212ENST00000484841 V9GYV3 84 aa12.68□□□□□ -0.38
ACTB-212ENST00000484841 FAT3Q8TDW7 4589 aa12.66□□□□□ -0.38
ACTB-212ENST00000484841 COX7A2LO14548 114 aa12.66□□□□□ -0.38
ACTB-212ENST00000484841 MT1HL1P0DM35 61 aa12.66□□□□□ -0.38
ACTB-212ENST00000484841 CAMPP49913 170 aa12.66□□□□□ -0.38
ACTB-212ENST00000484841 PRR3P79522 188 aaKnown RBP12.66□□□□□ -0.38
ACTB-212ENST00000484841 ADIRFQ15847 76 aa12.66□□□□□ -0.38
ACTB-212ENST00000484841 CSDC2Q9Y534 153 aaKnown RBP12.66□□□□□ -0.38
ACTB-212ENST00000484841 PKHD1L1Q86WI1 4243 aa12.66□□□□□ -0.38
ACTB-212ENST00000484841 RPL23P62829 140 aaKnown RBP12.64□□□□□ -0.39
ACTB-212ENST00000484841 NAT8Q9UHE5 227 aa12.64□□□□□ -0.39
ACTB-212ENST00000484841 UBE2D4Q9Y2X8 147 aa12.64□□□□□ -0.39
ACTB-212ENST00000484841 TRAV13-1A0A0B4J241 112 aa12.63□□□□□ -0.39
ACTB-212ENST00000484841 LOC107984640A0A0U1RRK4 108 aa12.63□□□□□ -0.39
ACTB-212ENST00000484841 APOMO95445 188 aa12.63□□□□□ -0.39
ACTB-212ENST00000484841 GAGE2BQ13066 116 aa12.63□□□□□ -0.39
ACTB-212ENST00000484841 NRACQ8N912 160 aa12.63□□□□□ -0.39
ACTB-212ENST00000484841 CAMK2N2Q96S95 79 aa12.63□□□□□ -0.39
ACTB-212ENST00000484841 IGLV4-69A0A075B6H9 119 aa12.62□□□□□ -0.39
ACTB-212ENST00000484841 A0A1B0GW15 77 aa12.62□□□□□ -0.39
ACTB-212ENST00000484841 LINC00862A6NCI5 91 aa12.62□□□□□ -0.39
ACTB-212ENST00000484841 TCAPO15273 167 aa12.62□□□□□ -0.39
ACTB-212ENST00000484841 CKS2P33552 79 aa12.62□□□□□ -0.39
ACTB-212ENST00000484841 PEA15Q15121 130 aa12.62□□□□□ -0.39
ACTB-212ENST00000484841 MRPL51Q4U2R6 128 aaKnown RBP12.62□□□□□ -0.39
ACTB-212ENST00000484841 RNASE13Q5GAN3 156 aaKnown RBP12.62□□□□□ -0.39
ACTB-212ENST00000484841 FAM104BQ5XKR9 115 aa12.62□□□□□ -0.39
ACTB-212ENST00000484841 Q6ZRP5 223 aa12.61□□□□□ -0.39
ACTB-212ENST00000484841 C20orf78Q9BR46 151 aa12.61□□□□□ -0.39
ACTB-212ENST00000484841 SMIM27A0A1W2PRY6 76 aa12.6□□□□□ -0.39
ACTB-212ENST00000484841 S100A8P05109 93 aa12.6□□□□□ -0.39
ACTB-212ENST00000484841 PTTG1IPP53801 180 aa12.6□□□□□ -0.39
ACTB-212ENST00000484841 REG3GQ6UW15 175 aa12.6□□□□□ -0.39
ACTB-212ENST00000484841 SPINK6Q6UWN8 80 aa12.6□□□□□ -0.39
ACTB-212ENST00000484841 TIMM21Q9BVV7 248 aa12.6□□□□□ -0.39
ACTB-212ENST00000484841 F8W036 122 aa12.59□□□□□ -0.39
ACTB-212ENST00000484841 Q6ZUT4 128 aa12.58□□□□□ -0.4
ACTB-212ENST00000484841 C5orf38Q86SI9 138 aa12.58□□□□□ -0.4
ACTB-212ENST00000484841 LINC01600Q96MT4 127 aa12.58□□□□□ -0.4
ACTB-212ENST00000484841 C2orf48Q96LS8 159 aa12.57□□□□□ -0.4
ACTB-212ENST00000484841 TRBV24-1A0A075B6N3 115 aa12.56□□□□□ -0.4
ACTB-212ENST00000484841 TNFRSF6BO95407 300 aa12.56□□□□□ -0.4
ACTB-212ENST00000484841 RPL18AQ02543 176 aaKnown RBP12.56□□□□□ -0.4
ACTB-212ENST00000484841 SMDT1Q9H4I9 107 aa12.56□□□□□ -0.4
ACTB-212ENST00000484841 RPL32P62910 135 aaKnown RBP12.55□□□□□ -0.4
ACTB-212ENST00000484841 SPAG11BQ08648 103 aa12.55□□□□□ -0.4
ACTB-212ENST00000484841 MRPL54Q6P161 138 aaKnown RBP12.55□□□□□ -0.4
ACTB-212ENST00000484841 HBBP68871 147 aa12.54□□□□□ -0.4
ACTB-212ENST00000484841 SMIM2Q9BVW6 85 aa12.54□□□□□ -0.4
ACTB-212ENST00000484841 HMCN2Q8NDA2 5059 aa12.53□□□□□ -0.4
ACTB-212ENST00000484841 C9JQL5 133 aa12.53□□□□□ -0.4
ACTB-212ENST00000484841 D6R8Y8 96 aa12.53□□□□□ -0.4
ACTB-212ENST00000484841 OR10D4PQ8NGN7 298 aa12.53□□□□□ -0.4
ACTB-212ENST00000484841 SPANXA1Q9NS26 97 aa12.53□□□□□ -0.4
ACTB-212ENST00000484841 A0A0J9YXV3 536 aa12.52□□□□□ -0.41
ACTB-212ENST00000484841 PPBPP02775 128 aa12.52□□□□□ -0.41
ACTB-212ENST00000484841 RAB5AP20339 215 aa12.52□□□□□ -0.41
ACTB-212ENST00000484841 RPL39P62891 51 aaKnown RBP12.52□□□□□ -0.41
ACTB-212ENST00000484841 ORAOV1Q8WV07 137 aa12.52□□□□□ -0.41
ACTB-212ENST00000484841 SRSF3P84103 164 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms