RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ALKAL2Q6UX46 152 aa7.19□□□□□ -1.26
SCFD1-206ENST00000484733 STPG4Q8N801 248 aa7.19□□□□□ -1.26
SCFD1-206ENST00000484733 TMEM242Q9NWH2 141 aa7.19□□□□□ -1.26
SCFD1-206ENST00000484733 CCL25O15444 150 aa7.18□□□□□ -1.26
SCFD1-206ENST00000484733 GAS8-AS1O95177 125 aa7.18□□□□□ -1.26
SCFD1-206ENST00000484733 RAB4AP20338 218 aa7.18□□□□□ -1.26
SCFD1-206ENST00000484733 PRR3P79522 188 aaKnown RBP7.18□□□□□ -1.26
SCFD1-206ENST00000484733 SS18Q15532 418 aa7.18□□□□□ -1.26
SCFD1-206ENST00000484733 LINC01551Q86U37 167 aa7.18□□□□□ -1.26
SCFD1-206ENST00000484733 A0A096LNI7 61 aa7.18□□□□□ -1.26
SCFD1-206ENST00000484733 IGKV2-24A0A0C4DH68 120 aa7.18□□□□□ -1.26
SCFD1-206ENST00000484733 XCL1P47992 114 aa7.18□□□□□ -1.26
SCFD1-206ENST00000484733 CD164L2Q6UWJ8 174 aa7.18□□□□□ -1.26
SCFD1-206ENST00000484733 AKAP14Q86UN6 197 aa7.18□□□□□ -1.26
SCFD1-206ENST00000484733 ZNF664Q8N3J9 261 aa7.18□□□□□ -1.26
SCFD1-206ENST00000484733 HIGD1CA8MV81 97 aa7.17□□□□□ -1.26
SCFD1-206ENST00000484733 LINC01600Q96MT4 127 aa7.17□□□□□ -1.26
SCFD1-206ENST00000484733 SMIM7Q9BQ49 75 aa7.17□□□□□ -1.26
SCFD1-206ENST00000484733 CARD19Q96LW7 228 aa7.17□□□□□ -1.26
SCFD1-206ENST00000484733 CSDC2Q9Y534 153 aaKnown RBP7.17□□□□□ -1.26
SCFD1-206ENST00000484733 C7orf77A4D0Y5 90 aa7.16□□□□□ -1.26
SCFD1-206ENST00000484733 VCYO14598 125 aa7.16□□□□□ -1.26
SCFD1-206ENST00000484733 PPP1R17O96001 155 aa7.16□□□□□ -1.26
SCFD1-206ENST00000484733 SMAGPQ0VAQ4 97 aa7.16□□□□□ -1.26
SCFD1-206ENST00000484733 TNXBP22105 4242 aa7.16□□□□□ -1.26
SCFD1-206ENST00000484733 SRP19P09132 144 aaKnown RBP7.16□□□□□ -1.26
SCFD1-206ENST00000484733 CEBPGP53567 150 aa7.16□□□□□ -1.26
SCFD1-206ENST00000484733 RIGQ13278 110 aa7.16□□□□□ -1.26
SCFD1-206ENST00000484733 EIF5A2Q9GZV4 153 aaKnown RBP7.16□□□□□ -1.26
SCFD1-206ENST00000484733 ZNF727A8MUV8 499 aa7.15□□□□□ -1.26
SCFD1-206ENST00000484733 SYCNQ0VAF6 134 aa7.15□□□□□ -1.26
SCFD1-206ENST00000484733 AMN1Q8IY45 258 aa7.15□□□□□ -1.26
SCFD1-206ENST00000484733 V9GYV3 84 aa7.15□□□□□ -1.26
SCFD1-206ENST00000484733 ZNF561-AS1K7EIQ3 104 aa7.15□□□□□ -1.27
SCFD1-206ENST00000484733 SPINK6Q6UWN8 80 aa7.15□□□□□ -1.27
SCFD1-206ENST00000484733 ISOC2Q96AB3 205 aa7.15□□□□□ -1.27
SCFD1-206ENST00000484733 C1orf196B1AJZ1 125 aa7.14□□□□□ -1.27
SCFD1-206ENST00000484733 PPP1R2P9O14990 202 aa7.14□□□□□ -1.27
SCFD1-206ENST00000484733 NRACQ8N912 160 aa7.14□□□□□ -1.27
SCFD1-206ENST00000484733 CAMPP49913 170 aa7.13□□□□□ -1.27
SCFD1-206ENST00000484733 SRSF9Q13242 221 aaKnown RBP eCLIP7.13□□□□□ -1.27
SCFD1-206ENST00000484733 NUP35Q8NFH5 326 aa7.13□□□□□ -1.27
SCFD1-206ENST00000484733 LINC00526Q96FQ7 95 aa7.13□□□□□ -1.27
SCFD1-206ENST00000484733 TIMM21Q9BVV7 248 aa7.13□□□□□ -1.27
SCFD1-206ENST00000484733 UBE2D4Q9Y2X8 147 aa7.13□□□□□ -1.27
SCFD1-206ENST00000484733 UBR4Q5T4S7 5183 aa7.13□□□□□ -1.27
SCFD1-206ENST00000484733 LOC107984640A0A0U1RRK4 108 aa7.13□□□□□ -1.27
SCFD1-206ENST00000484733 FCER1GP30273 86 aa7.13□□□□□ -1.27
SCFD1-206ENST00000484733 SUMO2P61956 95 aaKnown RBP7.13□□□□□ -1.27
SCFD1-206ENST00000484733 FAM74A3Q4VXF1 159 aa7.13□□□□□ -1.27
SCFD1-206ENST00000484733 COX7A2LO14548 114 aa7.12□□□□□ -1.27
SCFD1-206ENST00000484733 PTTG1IPP53801 180 aa7.12□□□□□ -1.27
SCFD1-206ENST00000484733 RPL32P62910 135 aaKnown RBP7.12□□□□□ -1.27
SCFD1-206ENST00000484733 Q6ZRP5 223 aa7.12□□□□□ -1.27
SCFD1-206ENST00000484733 C2orf48Q96LS8 159 aa7.12□□□□□ -1.27
SCFD1-206ENST00000484733 NAT8BQ9UHF3 227 aa7.12□□□□□ -1.27
SCFD1-206ENST00000484733 IGLV4-69A0A075B6H9 119 aa7.12□□□□□ -1.27
SCFD1-206ENST00000484733 A0A0J9YXV3 536 aa7.12□□□□□ -1.27
SCFD1-206ENST00000484733 SMKR1H3BMG3 65 aa7.12□□□□□ -1.27
SCFD1-206ENST00000484733 KRTAP10-8P60410 259 aa7.12□□□□□ -1.27
SCFD1-206ENST00000484733 TMEM241Q24JQ0 296 aa7.12□□□□□ -1.27
SCFD1-206ENST00000484733 REG3GQ6UW15 175 aa7.12□□□□□ -1.27
SCFD1-206ENST00000484733 KIR2DL4Q99706 377 aa7.12□□□□□ -1.27
SCFD1-206ENST00000484733 FAM104BQ5XKR9 115 aa7.11□□□□□ -1.27
SCFD1-206ENST00000484733 TMEM18Q96B42 140 aa7.11□□□□□ -1.27
SCFD1-206ENST00000484733 A0A1B0GW15 77 aa7.11□□□□□ -1.27
SCFD1-206ENST00000484733 LINC00862A6NCI5 91 aa7.11□□□□□ -1.27
SCFD1-206ENST00000484733 TCAPO15273 167 aa7.11□□□□□ -1.27
SCFD1-206ENST00000484733 MALP21145 153 aa7.11□□□□□ -1.27
SCFD1-206ENST00000484733 RNF151Q2KHN1 245 aa7.11□□□□□ -1.27
SCFD1-206ENST00000484733 C20orf78Q9BR46 151 aa7.11□□□□□ -1.27
SCFD1-206ENST00000484733 TRBV24-1A0A075B6N3 115 aa7.1□□□□□ -1.27
SCFD1-206ENST00000484733 RPL23P62829 140 aaKnown RBP7.1□□□□□ -1.27
SCFD1-206ENST00000484733 MRPL51Q4U2R6 128 aaKnown RBP7.1□□□□□ -1.27
SCFD1-206ENST00000484733 SMIM27A0A1W2PRY6 76 aa7.1□□□□□ -1.27
SCFD1-206ENST00000484733 F8WDY8 70 aa7.09□□□□□ -1.27
SCFD1-206ENST00000484733 APOMO95445 188 aa7.09□□□□□ -1.27
SCFD1-206ENST00000484733 CAMK2N2Q96S95 79 aa7.09□□□□□ -1.27
SCFD1-206ENST00000484733 NAT8Q9UHE5 227 aa7.09□□□□□ -1.27
SCFD1-206ENST00000484733 GAGE2BQ13066 116 aa7.09□□□□□ -1.28
SCFD1-206ENST00000484733 hCG_2014768A0A024R1R8 64 aa7.08□□□□□ -1.28
SCFD1-206ENST00000484733 TRAV13-1A0A0B4J241 112 aa7.08□□□□□ -1.28
SCFD1-206ENST00000484733 A0A1W2PNN7 141 aa7.08□□□□□ -1.28
SCFD1-206ENST00000484733 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-206ENST00000484733 Q6ZUT4 128 aa7.08□□□□□ -1.28
SCFD1-206ENST00000484733 OR10D4PQ8NGN7 298 aa7.08□□□□□ -1.28
SCFD1-206ENST00000484733 RNASE13Q5GAN3 156 aaKnown RBP7.07□□□□□ -1.28
SCFD1-206ENST00000484733 C5orf38Q86SI9 138 aa7.07□□□□□ -1.28
SCFD1-206ENST00000484733 SMDT1Q9H4I9 107 aa7.07□□□□□ -1.28
SCFD1-206ENST00000484733 CKS2P33552 79 aa7.06□□□□□ -1.28
SCFD1-206ENST00000484733 MRPS36P82909 103 aaKnown RBP7.06□□□□□ -1.28
SCFD1-206ENST00000484733 ADIRFQ15847 76 aa7.06□□□□□ -1.28
SCFD1-206ENST00000484733 FAM104AQ969W3 186 aa7.06□□□□□ -1.28
SCFD1-206ENST00000484733 SPANXA1Q9NS26 97 aa7.06□□□□□ -1.28
SCFD1-206ENST00000484733 C9JQL5 133 aa7.06□□□□□ -1.28
SCFD1-206ENST00000484733 TNFRSF6BO95407 300 aa7.06□□□□□ -1.28
SCFD1-206ENST00000484733 S100A8P05109 93 aa7.06□□□□□ -1.28
SCFD1-206ENST00000484733 SPAG11BQ08648 103 aa7.05□□□□□ -1.28
SCFD1-206ENST00000484733 PEA15Q15121 130 aa7.05□□□□□ -1.28
SCFD1-206ENST00000484733 C9orf116Q5BN46 136 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms