RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 C10orf91Q5T1B1 145 aa9.73□□□□□ -0.85
HLA-DQB1-208ENST00000484729 MRPL54Q6P161 138 aaKnown RBP9.73□□□□□ -0.85
HLA-DQB1-208ENST00000484729 GATD1Q8NB37 220 aa9.73□□□□□ -0.85
HLA-DQB1-208ENST00000484729 A0A087WYN8 130 aa9.72□□□□□ -0.85
HLA-DQB1-208ENST00000484729 AMMECR1LQ6DCA0 310 aa9.72□□□□□ -0.85
HLA-DQB1-208ENST00000484729 CFAP161Q6P656 301 aa9.72□□□□□ -0.85
HLA-DQB1-208ENST00000484729 A0A1B0GW15 77 aa9.71□□□□□ -0.86
HLA-DQB1-208ENST00000484729 APOC3P02656 99 aa9.71□□□□□ -0.86
HLA-DQB1-208ENST00000484729 S100A8P05109 93 aa9.71□□□□□ -0.86
HLA-DQB1-208ENST00000484729 CAMPP49913 170 aa9.71□□□□□ -0.86
HLA-DQB1-208ENST00000484729 HBBP68871 147 aa9.71□□□□□ -0.86
HLA-DQB1-208ENST00000484729 RHEBQ15382 184 aa9.71□□□□□ -0.86
HLA-DQB1-208ENST00000484729 HIGD2BQ4VC39 106 aa9.71□□□□□ -0.86
HLA-DQB1-208ENST00000484729 RNASEKQ6P5S7 137 aaKnown RBP9.71□□□□□ -0.86
HLA-DQB1-208ENST00000484729 C15orf56Q8N910 161 aa9.71□□□□□ -0.86
HLA-DQB1-208ENST00000484729 SPACA4Q8TDM5 124 aa9.71□□□□□ -0.86
HLA-DQB1-208ENST00000484729 RPL39LQ96EH5 51 aaKnown RBP9.71□□□□□ -0.86
HLA-DQB1-208ENST00000484729 RNF185Q96GF1 192 aa9.71□□□□□ -0.86
HLA-DQB1-208ENST00000484729 CTDSP1Q9GZU7 261 aa9.71□□□□□ -0.86
HLA-DQB1-208ENST00000484729 TMEM191AQ9H0A3 160 aa9.71□□□□□ -0.86
HLA-DQB1-208ENST00000484729 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.7□□□□□ -0.86
HLA-DQB1-208ENST00000484729 IGKV2-29A2NJV5 120 aaPredicted RBP9.7□□□□□ -0.86
HLA-DQB1-208ENST00000484729 APCSP02743 223 aa9.7□□□□□ -0.86
HLA-DQB1-208ENST00000484729 SLC7A5P1Q8MH63 180 aa9.7□□□□□ -0.86
HLA-DQB1-208ENST00000484729 RPS10P5Q9NQ39 176 aa9.7□□□□□ -0.86
HLA-DQB1-208ENST00000484729 C7orf77A4D0Y5 90 aa9.69□□□□□ -0.86
HLA-DQB1-208ENST00000484729 GAS8-AS1O95177 125 aa9.69□□□□□ -0.86
HLA-DQB1-208ENST00000484729 NCR2O95944 276 aa9.69□□□□□ -0.86
HLA-DQB1-208ENST00000484729 ATP5L2Q7Z4Y8 100 aa9.69□□□□□ -0.86
HLA-DQB1-208ENST00000484729 SVBPQ8N300 66 aa9.69□□□□□ -0.86
HLA-DQB1-208ENST00000484729 CHCHD10Q8WYQ3 142 aaPredicted RBP9.69□□□□□ -0.86
HLA-DQB1-208ENST00000484729 SNAPINO95295 136 aa9.68□□□□□ -0.86
HLA-DQB1-208ENST00000484729 S100PP25815 95 aa9.68□□□□□ -0.86
HLA-DQB1-208ENST00000484729 RPS10P46783 165 aaKnown RBP9.68□□□□□ -0.86
HLA-DQB1-208ENST00000484729 COX6A2Q02221 97 aa9.68□□□□□ -0.86
HLA-DQB1-208ENST00000484729 AMN1Q8IY45 258 aa9.68□□□□□ -0.86
HLA-DQB1-208ENST00000484729 BTF3L4Q96K17 158 aa9.68□□□□□ -0.86
HLA-DQB1-208ENST00000484729 IGKV2-24A0A0C4DH68 120 aa9.67□□□□□ -0.86
HLA-DQB1-208ENST00000484729 A0A1B0GXF2 115 aa9.67□□□□□ -0.86
HLA-DQB1-208ENST00000484729 SDHAF1A6NFY7 115 aa9.67□□□□□ -0.86
HLA-DQB1-208ENST00000484729 FGF6P10767 208 aa9.67□□□□□ -0.86
HLA-DQB1-208ENST00000484729 C7orf33Q8WU49 177 aa9.67□□□□□ -0.86
HLA-DQB1-208ENST00000484729 IMMP2LQ96T52 175 aa9.67□□□□□ -0.86
HLA-DQB1-208ENST00000484729 PLAC8Q9NZF1 115 aa9.67□□□□□ -0.86
HLA-DQB1-208ENST00000484729 H7C423 109 aa9.66□□□□□ -0.86
HLA-DQB1-208ENST00000484729 PHOX2AO14813 284 aa9.66□□□□□ -0.86
HLA-DQB1-208ENST00000484729 MAJINQ3KP22 176 aa9.66□□□□□ -0.86
HLA-DQB1-208ENST00000484729 MRAP2Q96G30 205 aa9.66□□□□□ -0.86
HLA-DQB1-208ENST00000484729 RAB4AP20338 218 aa9.65□□□□□ -0.86
HLA-DQB1-208ENST00000484729 PMCHP20382 165 aa9.65□□□□□ -0.86
HLA-DQB1-208ENST00000484729 FAM104BQ5XKR9 115 aa9.65□□□□□ -0.86
HLA-DQB1-208ENST00000484729 PRSS3P2Q8NHM4 247 aa9.65□□□□□ -0.86
HLA-DQB1-208ENST00000484729 LINC01600Q96MT4 127 aa9.65□□□□□ -0.86
HLA-DQB1-208ENST00000484729 TMEM242Q9NWH2 141 aa9.65□□□□□ -0.86
HLA-DQB1-208ENST00000484729 TRAV9-1A0A075B6T8 112 aa9.64□□□□□ -0.87
HLA-DQB1-208ENST00000484729 GVQW2A0A096LPI5 108 aaPredicted RBP9.64□□□□□ -0.87
HLA-DQB1-208ENST00000484729 I3L3M4 83 aa9.64□□□□□ -0.87
HLA-DQB1-208ENST00000484729 ZNF25P17030 456 aaPredicted RBP9.64□□□□□ -0.87
HLA-DQB1-208ENST00000484729 XCL1P47992 114 aa9.64□□□□□ -0.87
HLA-DQB1-208ENST00000484729 TMEM101Q96IK0 257 aa9.64□□□□□ -0.87
HLA-DQB1-208ENST00000484729 SMKR1H3BMG3 65 aa9.63□□□□□ -0.87
HLA-DQB1-208ENST00000484729 FOXI1Q12951 378 aa9.63□□□□□ -0.87
HLA-DQB1-208ENST00000484729 MRPL51Q4U2R6 128 aaKnown RBP9.63□□□□□ -0.87
HLA-DQB1-208ENST00000484729 OR5A1Q8NGJ0 315 aa9.63□□□□□ -0.87
HLA-DQB1-208ENST00000484729 CKS2P33552 79 aa9.62□□□□□ -0.87
HLA-DQB1-208ENST00000484729 STPG4Q8N801 248 aa9.62□□□□□ -0.87
HLA-DQB1-208ENST00000484729 ST20Q9HBF5 79 aa9.62□□□□□ -0.87
HLA-DQB1-208ENST00000484729 TRBV6-5A0A0K0K1A5 114 aa9.61□□□□□ -0.87
HLA-DQB1-208ENST00000484729 CCL25O15444 150 aa9.61□□□□□ -0.87
HLA-DQB1-208ENST00000484729 TSHBP01222 138 aa9.61□□□□□ -0.87
HLA-DQB1-208ENST00000484729 A0A096LNI7 61 aa9.6□□□□□ -0.87
HLA-DQB1-208ENST00000484729 LINC00959A0A1B0GUT2 108 aa9.6□□□□□ -0.87
HLA-DQB1-208ENST00000484729 D6R8Y8 96 aa9.6□□□□□ -0.87
HLA-DQB1-208ENST00000484729 PPP1R17O96001 155 aa9.6□□□□□ -0.87
HLA-DQB1-208ENST00000484729 LINC00526Q96FQ7 95 aa9.6□□□□□ -0.87
HLA-DQB1-208ENST00000484729 IGHV1-58A0A0C4DH39 117 aa9.59□□□□□ -0.87
HLA-DQB1-208ENST00000484729 ESDP10768 282 aa9.59□□□□□ -0.87
HLA-DQB1-208ENST00000484729 PRR3P79522 188 aaKnown RBP9.59□□□□□ -0.87
HLA-DQB1-208ENST00000484729 SS18Q15532 418 aa9.59□□□□□ -0.87
HLA-DQB1-208ENST00000484729 A0A0J9YXV3 536 aa9.58□□□□□ -0.88
HLA-DQB1-208ENST00000484729 PPBPP02775 128 aa9.58□□□□□ -0.88
HLA-DQB1-208ENST00000484729 KRTAP10-8P60410 259 aa9.58□□□□□ -0.88
HLA-DQB1-208ENST00000484729 TMEM136Q6ZRR5 245 aa9.58□□□□□ -0.88
HLA-DQB1-208ENST00000484729 ORMDL3Q8N138 153 aa9.58□□□□□ -0.88
HLA-DQB1-208ENST00000484729 NRACQ8N912 160 aa9.58□□□□□ -0.88
HLA-DQB1-208ENST00000484729 CARD19Q96LW7 228 aa9.58□□□□□ -0.88
HLA-DQB1-208ENST00000484729 PKIGQ9Y2B9 76 aa9.58□□□□□ -0.88
HLA-DQB1-208ENST00000484729 SUMO2P61956 95 aaKnown RBP9.57□□□□□ -0.88
HLA-DQB1-208ENST00000484729 PRELID3AQ96N28 172 aa9.57□□□□□ -0.88
HLA-DQB1-208ENST00000484729 LINC00474Q9P2X8 69 aa9.57□□□□□ -0.88
HLA-DQB1-208ENST00000484729 TGIF2-C20orf24A0A0A6YYL0 155 aa9.56□□□□□ -0.88
HLA-DQB1-208ENST00000484729 ZNF561-AS1K7EIQ3 104 aa9.56□□□□□ -0.88
HLA-DQB1-208ENST00000484729 TNFRSF6BO95407 300 aa9.56□□□□□ -0.88
HLA-DQB1-208ENST00000484729 COX19Q49B96 90 aa9.56□□□□□ -0.88
HLA-DQB1-208ENST00000484729 CD164L2Q6UWJ8 174 aa9.56□□□□□ -0.88
HLA-DQB1-208ENST00000484729 MRPL52Q86TS9 123 aaKnown RBP9.56□□□□□ -0.88
HLA-DQB1-208ENST00000484729 CDC42SE2Q9NRR3 84 aa9.56□□□□□ -0.88
HLA-DQB1-208ENST00000484729 TRBV27A0A0K0K1C4 114 aa9.55□□□□□ -0.88
HLA-DQB1-208ENST00000484729 NPYP01303 97 aa9.55□□□□□ -0.88
HLA-DQB1-208ENST00000484729 FCER1GP30273 86 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 217.7 ms