RNA–Protein interactions for RNA: ENST00000483128.1

SHANK1-207, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 780 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-207ENST00000483128 NAT8Q9UHE5 227 aa8.96□□□□□ -0.98
SHANK1-207ENST00000483128 NAT8BQ9UHF3 227 aa8.96□□□□□ -0.98
SHANK1-207ENST00000483128 LRP1Q07954 4544 aaKnown RBP8.95□□□□□ -0.98
SHANK1-207ENST00000483128 TRBV27A0A0K0K1C4 114 aa8.95□□□□□ -0.98
SHANK1-207ENST00000483128 LINC00959A0A1B0GUT2 108 aa8.95□□□□□ -0.98
SHANK1-207ENST00000483128 CCL25O15444 150 aa8.95□□□□□ -0.98
SHANK1-207ENST00000483128 CAMPP49913 170 aa8.95□□□□□ -0.98
SHANK1-207ENST00000483128 HNRNPA3P51991 378 aaKnown RBP8.95□□□□□ -0.98
SHANK1-207ENST00000483128 PEA15Q15121 130 aa8.95□□□□□ -0.98
SHANK1-207ENST00000483128 A0A087WYN8 130 aa8.94□□□□□ -0.98
SHANK1-207ENST00000483128 C7orf77A4D0Y5 90 aa8.94□□□□□ -0.98
SHANK1-207ENST00000483128 VCYO14598 125 aa8.94□□□□□ -0.98
SHANK1-207ENST00000483128 FCER1GP30273 86 aa8.94□□□□□ -0.98
SHANK1-207ENST00000483128 COX6A2Q02221 97 aa8.94□□□□□ -0.98
SHANK1-207ENST00000483128 CIRBPQ14011 172 aaKnown RBP8.94□□□□□ -0.98
SHANK1-207ENST00000483128 NRACQ8N912 160 aa8.94□□□□□ -0.98
SHANK1-207ENST00000483128 CDC42SE2Q9NRR3 84 aa8.94□□□□□ -0.98
SHANK1-207ENST00000483128 SMIM27A0A1W2PRY6 76 aa8.93□□□□□ -0.98
SHANK1-207ENST00000483128 SUMO2P61956 95 aaKnown RBP8.93□□□□□ -0.98
SHANK1-207ENST00000483128 MRPL51Q4U2R6 128 aaKnown RBP8.93□□□□□ -0.98
SHANK1-207ENST00000483128 ZNF664Q8N3J9 261 aa8.93□□□□□ -0.98
SHANK1-207ENST00000483128 PRSS3P2Q8NHM4 247 aa8.93□□□□□ -0.98
SHANK1-207ENST00000483128 SPACA4Q8TDM5 124 aa8.93□□□□□ -0.98
SHANK1-207ENST00000483128 LINC00526Q96FQ7 95 aa8.93□□□□□ -0.98
SHANK1-207ENST00000483128 PKHD1L1Q86WI1 4243 aa8.93□□□□□ -0.98
SHANK1-207ENST00000483128 GVQW2A0A096LPI5 108 aaPredicted RBP8.92□□□□□ -0.98
SHANK1-207ENST00000483128 IGKV2-24A0A0C4DH68 120 aa8.92□□□□□ -0.98
SHANK1-207ENST00000483128 SS18Q15532 418 aa8.92□□□□□ -0.98
SHANK1-207ENST00000483128 FAM104BQ5XKR9 115 aa8.92□□□□□ -0.98
SHANK1-207ENST00000483128 MRPL52Q86TS9 123 aaKnown RBP8.92□□□□□ -0.98
SHANK1-207ENST00000483128 PPP1R17O96001 155 aa8.91□□□□□ -0.98
SHANK1-207ENST00000483128 RNASE13Q5GAN3 156 aaKnown RBP8.91□□□□□ -0.98
SHANK1-207ENST00000483128 KIR2DL4Q99706 377 aa8.91□□□□□ -0.98
SHANK1-207ENST00000483128 FAT3Q8TDW7 4589 aa8.91□□□□□ -0.98
SHANK1-207ENST00000483128 IGHV1-58A0A0C4DH39 117 aa8.9□□□□□ -0.98
SHANK1-207ENST00000483128 OXTP01178 125 aa8.9□□□□□ -0.98
SHANK1-207ENST00000483128 MAJINQ3KP22 176 aa8.9□□□□□ -0.98
SHANK1-207ENST00000483128 MRPL54Q6P161 138 aaKnown RBP8.9□□□□□ -0.98
SHANK1-207ENST00000483128 SMDT1Q9H4I9 107 aa8.9□□□□□ -0.98
SHANK1-207ENST00000483128 PPP1R2P9O14990 202 aa8.89□□□□□ -0.99
SHANK1-207ENST00000483128 CKS2P33552 79 aa8.89□□□□□ -0.99
SHANK1-207ENST00000483128 CD164L2Q6UWJ8 174 aa8.89□□□□□ -0.99
SHANK1-207ENST00000483128 UBE2D4Q9Y2X8 147 aa8.89□□□□□ -0.99
SHANK1-207ENST00000483128 A0A1B0GW15 77 aa8.88□□□□□ -0.99
SHANK1-207ENST00000483128 LINC00862A6NCI5 91 aa8.88□□□□□ -0.99
SHANK1-207ENST00000483128 PLAC8Q9NZF1 115 aa8.88□□□□□ -0.99
SHANK1-207ENST00000483128 A0A096LNI7 61 aa8.87□□□□□ -0.99
SHANK1-207ENST00000483128 TRAV13-1A0A0B4J241 112 aa8.87□□□□□ -0.99
SHANK1-207ENST00000483128 ZNF561-AS1K7EIQ3 104 aa8.87□□□□□ -0.99
SHANK1-207ENST00000483128 PHOX2AO14813 284 aa8.87□□□□□ -0.99
SHANK1-207ENST00000483128 TNFRSF6BO95407 300 aa8.87□□□□□ -0.99
SHANK1-207ENST00000483128 HBBP68871 147 aa8.87□□□□□ -0.99
SHANK1-207ENST00000483128 STPG4Q8N801 248 aa8.87□□□□□ -0.99
SHANK1-207ENST00000483128 CARD19Q96LW7 228 aa8.87□□□□□ -0.99
SHANK1-207ENST00000483128 C20orf78Q9BR46 151 aa8.87□□□□□ -0.99
SHANK1-207ENST00000483128 TRBV24-1A0A075B6N3 115 aa8.86□□□□□ -0.99
SHANK1-207ENST00000483128 C1orf196B1AJZ1 125 aa8.86□□□□□ -0.99
SHANK1-207ENST00000483128 D6R8Y8 96 aa8.86□□□□□ -0.99
SHANK1-207ENST00000483128 MALP21145 153 aa8.86□□□□□ -0.99
SHANK1-207ENST00000483128 SMAGPQ0VAQ4 97 aa8.86□□□□□ -0.99
SHANK1-207ENST00000483128 Q6ZUT4 128 aa8.86□□□□□ -0.99
SHANK1-207ENST00000483128 CSDC2Q9Y534 153 aaKnown RBP8.86□□□□□ -0.99
SHANK1-207ENST00000483128 A0A1B0GXF2 115 aa8.85□□□□□ -0.99
SHANK1-207ENST00000483128 F8W036 122 aa8.85□□□□□ -0.99
SHANK1-207ENST00000483128 S100A8P05109 93 aa8.85□□□□□ -0.99
SHANK1-207ENST00000483128 RPL39P62891 51 aaKnown RBP8.85□□□□□ -0.99
SHANK1-207ENST00000483128 SYCNQ0VAF6 134 aa8.85□□□□□ -0.99
SHANK1-207ENST00000483128 C7orf33Q8WU49 177 aa8.85□□□□□ -0.99
SHANK1-207ENST00000483128 TMEM18Q96B42 140 aa8.85□□□□□ -0.99
SHANK1-207ENST00000483128 IGLV4-69A0A075B6H9 119 aa8.84□□□□□ -0.99
SHANK1-207ENST00000483128 COX7A2LO14548 114 aa8.84□□□□□ -0.99
SHANK1-207ENST00000483128 TCAPO15273 167 aa8.84□□□□□ -0.99
SHANK1-207ENST00000483128 NPYP01303 97 aa8.84□□□□□ -0.99
SHANK1-207ENST00000483128 C5orf38Q86SI9 138 aa8.84□□□□□ -0.99
SHANK1-207ENST00000483128 SMIM2Q9BVW6 85 aa8.84□□□□□ -0.99
SHANK1-207ENST00000483128 RPL32P62910 135 aaKnown RBP8.83□□□□□ -1
SHANK1-207ENST00000483128 OPRPNQ99935 248 aaPredicted RBP8.83□□□□□ -1
SHANK1-207ENST00000483128 TIMM21Q9BVV7 248 aa8.83□□□□□ -1
SHANK1-207ENST00000483128 SERTAD4-AS1Q5TG53 156 aa8.82□□□□□ -1
SHANK1-207ENST00000483128 Q6ZRU5 148 aa8.82□□□□□ -1
SHANK1-207ENST00000483128 PPBPP02775 128 aa8.81□□□□□ -1
SHANK1-207ENST00000483128 GAGE2BQ13066 116 aa8.81□□□□□ -1
SHANK1-207ENST00000483128 TMEM136Q6ZRR5 245 aa8.81□□□□□ -1
SHANK1-207ENST00000483128 CAMK2N2Q96S95 79 aa8.81□□□□□ -1
SHANK1-207ENST00000483128 LINC00474Q9P2X8 69 aa8.81□□□□□ -1
SHANK1-207ENST00000483128 PKIGQ9Y2B9 76 aa8.81□□□□□ -1
SHANK1-207ENST00000483128 ORMDL3Q8N138 153 aa8.8□□□□□ -1
SHANK1-207ENST00000483128 FAM104AQ969W3 186 aa8.8□□□□□ -1
SHANK1-207ENST00000483128 PRELID3AQ96N28 172 aa8.8□□□□□ -1
SHANK1-207ENST00000483128 SPANXA1Q9NS26 97 aa8.8□□□□□ -1
SHANK1-207ENST00000483128 LOC107984640A0A0U1RRK4 108 aa8.79□□□□□ -1
SHANK1-207ENST00000483128 APOMO95445 188 aa8.79□□□□□ -1
SHANK1-207ENST00000483128 RAB5AP20339 215 aa8.79□□□□□ -1
SHANK1-207ENST00000483128 RAB14P61106 215 aa8.79□□□□□ -1
SHANK1-207ENST00000483128 PRR3P79522 188 aaKnown RBP8.79□□□□□ -1
SHANK1-207ENST00000483128 ATP5L2Q7Z4Y8 100 aa8.79□□□□□ -1
SHANK1-207ENST00000483128 LOC389332A0A1B0GUA5 103 aa8.78□□□□□ -1
SHANK1-207ENST00000483128 PTTG1IPP53801 180 aa8.78□□□□□ -1
SHANK1-207ENST00000483128 SPAG11BQ08648 103 aa8.78□□□□□ -1
SHANK1-207ENST00000483128 A0A0J9YXV3 536 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 269.1 ms