RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 LINC00526Q96FQ7 95 aa6.68□□□□□ -1.34
CPSF4-212ENST00000482251 DPH3Q96FX2 82 aa6.68□□□□□ -1.34
CPSF4-212ENST00000482251 NAT8Q9UHE5 227 aa6.68□□□□□ -1.34
CPSF4-212ENST00000482251 NAT8BQ9UHF3 227 aa6.68□□□□□ -1.34
CPSF4-212ENST00000482251 LRP1Q07954 4544 aaKnown RBP6.68□□□□□ -1.34
CPSF4-212ENST00000482251 IGKV2-24A0A0C4DH68 120 aa6.67□□□□□ -1.34
CPSF4-212ENST00000482251 LINC00959A0A1B0GUT2 108 aa6.67□□□□□ -1.34
CPSF4-212ENST00000482251 FCER1GP30273 86 aa6.67□□□□□ -1.34
CPSF4-212ENST00000482251 CAMPP49913 170 aa6.67□□□□□ -1.34
CPSF4-212ENST00000482251 POLR2KP53803 58 aaKnown RBP6.67□□□□□ -1.34
CPSF4-212ENST00000482251 COX6A2Q02221 97 aa6.67□□□□□ -1.34
CPSF4-212ENST00000482251 FAM74A3Q4VXF1 159 aa6.67□□□□□ -1.34
CPSF4-212ENST00000482251 CFAP161Q6P656 301 aa6.67□□□□□ -1.34
CPSF4-212ENST00000482251 NRACQ8N912 160 aa6.67□□□□□ -1.34
CPSF4-212ENST00000482251 SPACA4Q8TDM5 124 aa6.67□□□□□ -1.34
CPSF4-212ENST00000482251 PKHD1L1Q86WI1 4243 aa6.66□□□□□ -1.34
CPSF4-212ENST00000482251 A0A087WYN8 130 aa6.66□□□□□ -1.34
CPSF4-212ENST00000482251 GVQW2A0A096LPI5 108 aaPredicted RBP6.66□□□□□ -1.34
CPSF4-212ENST00000482251 TRBV27A0A0K0K1C4 114 aa6.66□□□□□ -1.34
CPSF4-212ENST00000482251 SUMO2P61956 95 aaKnown RBP6.66□□□□□ -1.34
CPSF4-212ENST00000482251 CIRBPQ14011 172 aaKnown RBP6.66□□□□□ -1.34
CPSF4-212ENST00000482251 PEA15Q15121 130 aa6.66□□□□□ -1.34
CPSF4-212ENST00000482251 MRPL51Q4U2R6 128 aaKnown RBP6.66□□□□□ -1.34
CPSF4-212ENST00000482251 MRPL54Q6P161 138 aaKnown RBP6.66□□□□□ -1.34
CPSF4-212ENST00000482251 SMIM27A0A1W2PRY6 76 aa6.65□□□□□ -1.34
CPSF4-212ENST00000482251 MAJINQ3KP22 176 aa6.65□□□□□ -1.34
CPSF4-212ENST00000482251 PRSS3P2Q8NHM4 247 aa6.65□□□□□ -1.34
CPSF4-212ENST00000482251 CDC42SE2Q9NRR3 84 aa6.65□□□□□ -1.34
CPSF4-212ENST00000482251 FAT3Q8TDW7 4589 aa6.64□□□□□ -1.35
CPSF4-212ENST00000482251 VCYO14598 125 aa6.64□□□□□ -1.35
CPSF4-212ENST00000482251 SS18Q15532 418 aa6.64□□□□□ -1.35
CPSF4-212ENST00000482251 FAM104BQ5XKR9 115 aa6.64□□□□□ -1.35
CPSF4-212ENST00000482251 Q6ZUT4 128 aa6.64□□□□□ -1.35
CPSF4-212ENST00000482251 MRPL52Q86TS9 123 aaKnown RBP6.64□□□□□ -1.35
CPSF4-212ENST00000482251 ZNF664Q8N3J9 261 aa6.64□□□□□ -1.35
CPSF4-212ENST00000482251 KIR2DL4Q99706 377 aa6.64□□□□□ -1.35
CPSF4-212ENST00000482251 A0A096LNI7 61 aa6.63□□□□□ -1.35
CPSF4-212ENST00000482251 TRAV13-1A0A0B4J241 112 aa6.63□□□□□ -1.35
CPSF4-212ENST00000482251 PHOX2AO14813 284 aa6.63□□□□□ -1.35
CPSF4-212ENST00000482251 CKS2P33552 79 aa6.63□□□□□ -1.35
CPSF4-212ENST00000482251 CARD19Q96LW7 228 aa6.63□□□□□ -1.35
CPSF4-212ENST00000482251 UBE2D4Q9Y2X8 147 aa6.63□□□□□ -1.35
CPSF4-212ENST00000482251 IGHV1-58A0A0C4DH39 117 aa6.62□□□□□ -1.35
CPSF4-212ENST00000482251 D6R8Y8 96 aa6.62□□□□□ -1.35
CPSF4-212ENST00000482251 PPP1R2P9O14990 202 aa6.62□□□□□ -1.35
CPSF4-212ENST00000482251 PPP1R17O96001 155 aa6.62□□□□□ -1.35
CPSF4-212ENST00000482251 RPL39P62891 51 aaKnown RBP6.62□□□□□ -1.35
CPSF4-212ENST00000482251 HBBP68871 147 aa6.62□□□□□ -1.35
CPSF4-212ENST00000482251 CD164L2Q6UWJ8 174 aa6.62□□□□□ -1.35
CPSF4-212ENST00000482251 ZNF561-AS1K7EIQ3 104 aa6.61□□□□□ -1.35
CPSF4-212ENST00000482251 TNFRSF6BO95407 300 aa6.61□□□□□ -1.35
CPSF4-212ENST00000482251 OXTP01178 125 aa6.61□□□□□ -1.35
CPSF4-212ENST00000482251 NPYP01303 97 aa6.61□□□□□ -1.35
CPSF4-212ENST00000482251 MALP21145 153 aa6.61□□□□□ -1.35
CPSF4-212ENST00000482251 STPG4Q8N801 248 aa6.61□□□□□ -1.35
CPSF4-212ENST00000482251 SMIM2Q9BVW6 85 aa6.61□□□□□ -1.35
CPSF4-212ENST00000482251 PLAC8Q9NZF1 115 aa6.61□□□□□ -1.35
CPSF4-212ENST00000482251 A0A1B0GW15 77 aa6.6□□□□□ -1.35
CPSF4-212ENST00000482251 A0A1B0GXF2 115 aa6.6□□□□□ -1.35
CPSF4-212ENST00000482251 COX7A2LO14548 114 aa6.6□□□□□ -1.35
CPSF4-212ENST00000482251 TCAPO15273 167 aa6.6□□□□□ -1.35
CPSF4-212ENST00000482251 C5orf38Q86SI9 138 aa6.6□□□□□ -1.35
CPSF4-212ENST00000482251 C7orf33Q8WU49 177 aa6.6□□□□□ -1.35
CPSF4-212ENST00000482251 IGLV4-69A0A075B6H9 119 aa6.59□□□□□ -1.35
CPSF4-212ENST00000482251 LINC00862A6NCI5 91 aa6.59□□□□□ -1.35
CPSF4-212ENST00000482251 C1orf196B1AJZ1 125 aa6.59□□□□□ -1.35
CPSF4-212ENST00000482251 F8W036 122 aa6.59□□□□□ -1.35
CPSF4-212ENST00000482251 SYCNQ0VAF6 134 aa6.59□□□□□ -1.35
CPSF4-212ENST00000482251 SMAGPQ0VAQ4 97 aa6.59□□□□□ -1.35
CPSF4-212ENST00000482251 TMEM18Q96B42 140 aa6.59□□□□□ -1.35
CPSF4-212ENST00000482251 OPRPNQ99935 248 aaPredicted RBP6.59□□□□□ -1.35
CPSF4-212ENST00000482251 C20orf78Q9BR46 151 aa6.59□□□□□ -1.35
CPSF4-212ENST00000482251 SMDT1Q9H4I9 107 aa6.59□□□□□ -1.35
CPSF4-212ENST00000482251 TRBV24-1A0A075B6N3 115 aa6.58□□□□□ -1.36
CPSF4-212ENST00000482251 S100A8P05109 93 aa6.58□□□□□ -1.36
CPSF4-212ENST00000482251 Q6ZRU5 148 aa6.58□□□□□ -1.36
CPSF4-212ENST00000482251 CSDC2Q9Y534 153 aaKnown RBP6.58□□□□□ -1.36
CPSF4-212ENST00000482251 PRR3P79522 188 aaKnown RBP6.57□□□□□ -1.36
CPSF4-212ENST00000482251 SPAG11BQ08648 103 aa6.57□□□□□ -1.36
CPSF4-212ENST00000482251 GAGE2BQ13066 116 aa6.57□□□□□ -1.36
CPSF4-212ENST00000482251 CAMK2N2Q96S95 79 aa6.57□□□□□ -1.36
CPSF4-212ENST00000482251 TIMM21Q9BVV7 248 aa6.57□□□□□ -1.36
CPSF4-212ENST00000482251 IFITM10A6NMD0 228 aa6.56□□□□□ -1.36
CPSF4-212ENST00000482251 RPL32P62910 135 aaKnown RBP6.56□□□□□ -1.36
CPSF4-212ENST00000482251 RPL18AQ02543 176 aaKnown RBP6.56□□□□□ -1.36
CPSF4-212ENST00000482251 ATP5L2Q7Z4Y8 100 aa6.56□□□□□ -1.36
CPSF4-212ENST00000482251 ORMDL3Q8N138 153 aa6.56□□□□□ -1.36
CPSF4-212ENST00000482251 FAM104AQ969W3 186 aa6.56□□□□□ -1.36
CPSF4-212ENST00000482251 PRELID3AQ96N28 172 aa6.56□□□□□ -1.36
CPSF4-212ENST00000482251 SPANXA1Q9NS26 97 aa6.56□□□□□ -1.36
CPSF4-212ENST00000482251 A0A0J9YXV3 536 aa6.55□□□□□ -1.36
CPSF4-212ENST00000482251 LOC389332A0A1B0GUA5 103 aa6.55□□□□□ -1.36
CPSF4-212ENST00000482251 MT1HL1P0DM35 61 aa6.55□□□□□ -1.36
CPSF4-212ENST00000482251 PTTG1IPP53801 180 aa6.55□□□□□ -1.36
CPSF4-212ENST00000482251 TMEM136Q6ZRR5 245 aa6.55□□□□□ -1.36
CPSF4-212ENST00000482251 ORAOV1Q8WV07 137 aa6.55□□□□□ -1.36
CPSF4-212ENST00000482251 LINC00474Q9P2X8 69 aa6.55□□□□□ -1.36
CPSF4-212ENST00000482251 PKIGQ9Y2B9 76 aa6.55□□□□□ -1.36
CPSF4-212ENST00000482251 HMCN2Q8NDA2 5059 aa6.55□□□□□ -1.36
CPSF4-212ENST00000482251 LOC107984640A0A0U1RRK4 108 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms