RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 UBE2D2P62837 147 aa10.07□□□□□ -0.8
USP42-206ENST00000479544 hADV29S1A0JD25 119 aa10.07□□□□□ -0.8
USP42-206ENST00000479544 SLPIP03973 132 aa10.07□□□□□ -0.8
USP42-206ENST00000479544 IGIPA6NJ69 53 aa10.06□□□□□ -0.8
USP42-206ENST00000479544 IGHV4OR15-8A0A075B7B6 117 aa10.06□□□□□ -0.8
USP42-206ENST00000479544 A0A087WW49 117 aa10.06□□□□□ -0.8
USP42-206ENST00000479544 H7C423 109 aa10.06□□□□□ -0.8
USP42-206ENST00000479544 UBL5Q9BZL1 73 aa10.06□□□□□ -0.8
USP42-206ENST00000479544 IGLV4-69A0A075B6H9 119 aa10.05□□□□□ -0.8
USP42-206ENST00000479544 IGLV10-54A0A075B6I4 117 aa10.05□□□□□ -0.8
USP42-206ENST00000479544 IGHV4-30-2A0A087WSY4 118 aa10.05□□□□□ -0.8
USP42-206ENST00000479544 PF4P02776 101 aa10.05□□□□□ -0.8
USP42-206ENST00000479544 TMEM263Q8WUH6 116 aaKnown RBP10.05□□□□□ -0.8
USP42-206ENST00000479544 AKAP13Q12802 2813 aa10.05□□□□□ -0.8
USP42-206ENST00000479544 DMXL2Q8TDJ6 3036 aa10.05□□□□□ -0.8
USP42-206ENST00000479544 POM121L12Q8N7R1 296 aa10.05□□□□□ -0.8
USP42-206ENST00000479544 DNAJC30Q96LL9 226 aa10.05□□□□□ -0.8
USP42-206ENST00000479544 PRO0461Q9UI25 63 aa10.05□□□□□ -0.8
USP42-206ENST00000479544 TRBV27A0A0K0K1C4 114 aa10.04□□□□□ -0.8
USP42-206ENST00000479544 TNFRSF13BO14836 293 aaPredicted RBP10.04□□□□□ -0.8
USP42-206ENST00000479544 ACYP1P07311 99 aa10.04□□□□□ -0.8
USP42-206ENST00000479544 CDSNQ15517 529 aa10.04□□□□□ -0.8
USP42-206ENST00000479544 ESM1Q9NQ30 184 aa10.04□□□□□ -0.8
USP42-206ENST00000479544 RAI1Q7Z5J4 1906 aaPredicted RBP10.04□□□□□ -0.8
USP42-206ENST00000479544 MED14OSP0DP75 135 aa10.04□□□□□ -0.8
USP42-206ENST00000479544 LINC00643Q86TS7 51 aa10.04□□□□□ -0.8
USP42-206ENST00000479544 TRBV30A0A0K0K1B3 111 aa10.03□□□□□ -0.8
USP42-206ENST00000479544 GPHB5Q86YW7 130 aa10.03□□□□□ -0.8
USP42-206ENST00000479544 IGHV4-4A0A075B6R2 117 aa10.03□□□□□ -0.8
USP42-206ENST00000479544 LMO4P61968 165 aa10.03□□□□□ -0.8
USP42-206ENST00000479544 KLK5Q9Y337 293 aaPredicted RBP10.03□□□□□ -0.8
USP42-206ENST00000479544 WDFY3Q8IZQ1 3526 aa10.03□□□□□ -0.8
USP42-206ENST00000479544 TRAV23DV6A0A075B6W5 121 aa10.03□□□□□ -0.8
USP42-206ENST00000479544 TMEM61Q8N0U2 210 aa10.03□□□□□ -0.8
USP42-206ENST00000479544 TSHBP01222 138 aa10.02□□□□□ -0.8
USP42-206ENST00000479544 CRYGDP07320 174 aa10.02□□□□□ -0.8
USP42-206ENST00000479544 ADAMTSL4-AS1Q5T5F5 129 aa10.02□□□□□ -0.81
USP42-206ENST00000479544 SHISA2Q6UWI4 295 aa10.02□□□□□ -0.81
USP42-206ENST00000479544 OVOL2Q9BRP0 275 aa10.02□□□□□ -0.81
USP42-206ENST00000479544 NDUFA7O95182 113 aa10.02□□□□□ -0.81
USP42-206ENST00000479544 IGHG2P01859 326 aa10.02□□□□□ -0.81
USP42-206ENST00000479544 FBXL19-AS1Q494R0 122 aa10.02□□□□□ -0.81
USP42-206ENST00000479544 LINC00308Q8TCZ7 52 aa10.02□□□□□ -0.81
USP42-206ENST00000479544 J3KT08 172 aa10.01□□□□□ -0.81
USP42-206ENST00000479544 ATOX1O00244 68 aa10.01□□□□□ -0.81
USP42-206ENST00000479544 SS18Q15532 418 aa10.01□□□□□ -0.81
USP42-206ENST00000479544 LINC01619G3V211 115 aa10.01□□□□□ -0.81
USP42-206ENST00000479544 COX7A2LO14548 114 aa10.01□□□□□ -0.81
USP42-206ENST00000479544 ELANEP08246 267 aa10.01□□□□□ -0.81
USP42-206ENST00000479544 RBMY1FQ15415 496 aaKnown RBP10.01□□□□□ -0.81
USP42-206ENST00000479544 CITED2Q99967 270 aaPredicted RBP10.01□□□□□ -0.81
USP42-206ENST00000479544 HIST2H2BCQ6DN03 193 aa10□□□□□ -0.81
USP42-206ENST00000479544 RBM3P98179 157 aaKnown RBP10□□□□□ -0.81
USP42-206ENST00000479544 EBI3Q14213 229 aa10□□□□□ -0.81
USP42-206ENST00000479544 LINC01356Q8N9X3 169 aa10□□□□□ -0.81
USP42-206ENST00000479544 Q8N6K4 173 aa9.99□□□□□ -0.81
USP42-206ENST00000479544 NCR3O14931 201 aa9.99□□□□□ -0.81
USP42-206ENST00000479544 PRB2P02812 416 aaPredicted RBP9.99□□□□□ -0.81
USP42-206ENST00000479544 ORMDL1Q9P0S3 153 aa9.99□□□□□ -0.81
USP42-206ENST00000479544 LINC00694P0DN24 101 aa9.99□□□□□ -0.81
USP42-206ENST00000479544 IGSF10Q6WRI0 2623 aa9.99□□□□□ -0.81
USP42-206ENST00000479544 LST1O00453 97 aa9.99□□□□□ -0.81
USP42-206ENST00000479544 C20orf197Q8N268 126 aa9.98□□□□□ -0.81
USP42-206ENST00000479544 COX7B2Q8TF08 81 aa9.98□□□□□ -0.81
USP42-206ENST00000479544 PSMG3-AS1Q96PY0 264 aa9.98□□□□□ -0.81
USP42-206ENST00000479544 C1orf43Q9BWL3 253 aa9.98□□□□□ -0.81
USP42-206ENST00000479544 DSCR9P59020 149 aa9.98□□□□□ -0.81
USP42-206ENST00000479544 TRAV25A0A0B4J276 109 aa9.97□□□□□ -0.81
USP42-206ENST00000479544 M0QXV9 152 aa9.97□□□□□ -0.81
USP42-206ENST00000479544 UQCRQO14949 82 aa9.97□□□□□ -0.81
USP42-206ENST00000479544 DMXL1Q9Y485 3027 aa9.97□□□□□ -0.81
USP42-206ENST00000479544 ANGP03950 147 aaKnown RBP9.97□□□□□ -0.81
USP42-206ENST00000479544 H3BUA1 57 aa9.97□□□□□ -0.81
USP42-206ENST00000479544 Q6ZTI0 123 aa9.97□□□□□ -0.81
USP42-206ENST00000479544 C3orf22Q8N5N4 141 aa9.96□□□□□ -0.81
USP42-206ENST00000479544 LOC107984640A0A0U1RRK4 108 aa9.96□□□□□ -0.82
USP42-206ENST00000479544 DAD1P61803 113 aa9.96□□□□□ -0.82
USP42-206ENST00000479544 FHL3Q13643 280 aa9.96□□□□□ -0.82
USP42-206ENST00000479544 MAST4O15021 2626 aa9.96□□□□□ -0.82
USP42-206ENST00000479544 ATMQ13315 3056 aa9.96□□□□□ -0.82
USP42-206ENST00000479544 ANKRD17O75179 2603 aaKnown RBP9.95□□□□□ -0.82
USP42-206ENST00000479544 A0A087WVE0 104 aa9.95□□□□□ -0.82
USP42-206ENST00000479544 TIRAPP58753 221 aa9.95□□□□□ -0.82
USP42-206ENST00000479544 COX8CQ7Z4L0 72 aa9.95□□□□□ -0.82
USP42-206ENST00000479544 MRAPQ8TCY5 172 aa9.95□□□□□ -0.82
USP42-206ENST00000479544 WFDC9Q8NEX5 89 aa9.95□□□□□ -0.82
USP42-206ENST00000479544 K7EMT4 169 aa9.95□□□□□ -0.82
USP42-206ENST00000479544 K7EQG2 157 aa9.95□□□□□ -0.82
USP42-206ENST00000479544 GHRHP01286 108 aa9.95□□□□□ -0.82
USP42-206ENST00000479544 WFDC11Q8NEX6 87 aa9.95□□□□□ -0.82
USP42-206ENST00000479544 PCSK5Q92824 1860 aa9.94□□□□□ -0.82
USP42-206ENST00000479544 KLLNB2CW77 178 aa9.94□□□□□ -0.82
USP42-206ENST00000479544 TRBV6-5A0A0K0K1A5 114 aa9.93□□□□□ -0.82
USP42-206ENST00000479544 C19orf84I3L1E1 186 aa9.93□□□□□ -0.82
USP42-206ENST00000479544 K7EQD1 137 aa9.93□□□□□ -0.82
USP42-206ENST00000479544 H0YGX0 51 aa9.93□□□□□ -0.82
USP42-206ENST00000479544 RNF152Q8N8N0 203 aa9.93□□□□□ -0.82
USP42-206ENST00000479544 C10orf105Q8TEF2 133 aa9.93□□□□□ -0.82
USP42-206ENST00000479544 DSCR8Q96T75 97 aa9.93□□□□□ -0.82
USP42-206ENST00000479544 PPDPFQ9H3Y8 114 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms