RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 CT83Q5H943 113 aa8.12□□□□□ -1.11
MRPL55-228ENST00000476267 SMIM15Q7Z3B0 74 aa8.12□□□□□ -1.11
MRPL55-228ENST00000476267 CARD19Q96LW7 228 aa8.12□□□□□ -1.11
MRPL55-228ENST00000476267 FAM210AQ96ND0 272 aa8.12□□□□□ -1.11
MRPL55-228ENST00000476267 TRBV27A0A0K0K1C4 114 aa8.11□□□□□ -1.11
MRPL55-228ENST00000476267 A8MWL6 223 aa8.11□□□□□ -1.11
MRPL55-228ENST00000476267 GATCO43716 136 aaKnown RBP8.11□□□□□ -1.11
MRPL55-228ENST00000476267 PMCHP20382 165 aa8.11□□□□□ -1.11
MRPL55-228ENST00000476267 CD164L2Q6UWJ8 174 aa8.11□□□□□ -1.11
MRPL55-228ENST00000476267 BTF3L4Q96K17 158 aa8.11□□□□□ -1.11
MRPL55-228ENST00000476267 TMEM242Q9NWH2 141 aa8.11□□□□□ -1.11
MRPL55-228ENST00000476267 PKIGQ9Y2B9 76 aa8.11□□□□□ -1.11
MRPL55-228ENST00000476267 LPAP08519 4548 aa8.1□□□□□ -1.11
MRPL55-228ENST00000476267 Q6ZRP5 223 aa8.1□□□□□ -1.11
MRPL55-228ENST00000476267 MRAP2Q96G30 205 aa8.1□□□□□ -1.11
MRPL55-228ENST00000476267 TMEM101Q96IK0 257 aa8.1□□□□□ -1.11
MRPL55-228ENST00000476267 TMEM191AQ9H0A3 160 aa8.1□□□□□ -1.11
MRPL55-228ENST00000476267 ST20Q9HBF5 79 aa8.1□□□□□ -1.11
MRPL55-228ENST00000476267 PTTG1IPP53801 180 aa8.09□□□□□ -1.11
MRPL55-228ENST00000476267 SYCNQ0VAF6 134 aa8.09□□□□□ -1.11
MRPL55-228ENST00000476267 REG3GQ6UW15 175 aa8.09□□□□□ -1.11
MRPL55-228ENST00000476267 ZNF664Q8N3J9 261 aa8.09□□□□□ -1.11
MRPL55-228ENST00000476267 RAB4AP20338 218 aa8.08□□□□□ -1.12
MRPL55-228ENST00000476267 CAMPP49913 170 aa8.08□□□□□ -1.12
MRPL55-228ENST00000476267 SS18Q15532 418 aa8.08□□□□□ -1.12
MRPL55-228ENST00000476267 IGLV4-69A0A075B6H9 119 aa8.07□□□□□ -1.12
MRPL55-228ENST00000476267 C7orf77A4D0Y5 90 aa8.07□□□□□ -1.12
MRPL55-228ENST00000476267 ZNF561-AS1K7EIQ3 104 aa8.07□□□□□ -1.12
MRPL55-228ENST00000476267 LINC01551Q86U37 167 aa8.07□□□□□ -1.12
MRPL55-228ENST00000476267 NUP35Q8NFH5 326 aa8.07□□□□□ -1.12
MRPL55-228ENST00000476267 TSKUQ8WUA8 353 aa8.07□□□□□ -1.12
MRPL55-228ENST00000476267 CSDC2Q9Y534 153 aaKnown RBP8.07□□□□□ -1.12
MRPL55-228ENST00000476267 LOC107984640A0A0U1RRK4 108 aa8.06□□□□□ -1.12
MRPL55-228ENST00000476267 A0A1B0GUT8 65 aa8.06□□□□□ -1.12
MRPL55-228ENST00000476267 A0A1W2PNN7 141 aa8.06□□□□□ -1.12
MRPL55-228ENST00000476267 HIGD1CA8MV81 97 aa8.06□□□□□ -1.12
MRPL55-228ENST00000476267 AMN1Q8IY45 258 aa8.06□□□□□ -1.12
MRPL55-228ENST00000476267 NRACQ8N912 160 aa8.06□□□□□ -1.12
MRPL55-228ENST00000476267 UBE2D4Q9Y2X8 147 aa8.06□□□□□ -1.12
MRPL55-228ENST00000476267 C1orf196B1AJZ1 125 aa8.04□□□□□ -1.12
MRPL55-228ENST00000476267 SMKR1H3BMG3 65 aa8.04□□□□□ -1.12
MRPL55-228ENST00000476267 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.04□□□□□ -1.12
MRPL55-228ENST00000476267 BLOC1S1P78537 153 aa8.04□□□□□ -1.12
MRPL55-228ENST00000476267 GAGE2BQ13066 116 aa8.04□□□□□ -1.12
MRPL55-228ENST00000476267 ALKAL2Q6UX46 152 aa8.04□□□□□ -1.12
MRPL55-228ENST00000476267 ISOC2Q96AB3 205 aa8.04□□□□□ -1.12
MRPL55-228ENST00000476267 BORCS7Q96B45 105 aa8.04□□□□□ -1.12
MRPL55-228ENST00000476267 OSTCQ9NRP0 149 aa8.04□□□□□ -1.12
MRPL55-228ENST00000476267 COX7A2LO14548 114 aa8.03□□□□□ -1.12
MRPL55-228ENST00000476267 VCYO14598 125 aa8.03□□□□□ -1.12
MRPL55-228ENST00000476267 APOMO95445 188 aa8.03□□□□□ -1.12
MRPL55-228ENST00000476267 RNASE13Q5GAN3 156 aaKnown RBP8.03□□□□□ -1.12
MRPL55-228ENST00000476267 FAM104AQ969W3 186 aa8.03□□□□□ -1.12
MRPL55-228ENST00000476267 C2orf48Q96LS8 159 aa8.03□□□□□ -1.12
MRPL55-228ENST00000476267 PSORS1C2Q9UIG4 136 aa8.03□□□□□ -1.12
MRPL55-228ENST00000476267 V9GYV3 84 aa8.03□□□□□ -1.12
MRPL55-228ENST00000476267 SUMO2P61956 95 aaKnown RBP8.02□□□□□ -1.13
MRPL55-228ENST00000476267 C9orf116Q5BN46 136 aaPredicted RBP8.02□□□□□ -1.13
MRPL55-228ENST00000476267 CAMK2N2Q96S95 79 aa8.02□□□□□ -1.13
MRPL55-228ENST00000476267 SMIM7Q9BQ49 75 aa8.02□□□□□ -1.13
MRPL55-228ENST00000476267 MALP21145 153 aa8.01□□□□□ -1.13
MRPL55-228ENST00000476267 CEBPGP53567 150 aa8.01□□□□□ -1.13
MRPL55-228ENST00000476267 Q6ZUT4 128 aa8.01□□□□□ -1.13
MRPL55-228ENST00000476267 TIMM21Q9BVV7 248 aa8.01□□□□□ -1.13
MRPL55-228ENST00000476267 SRP19P09132 144 aaKnown RBP8□□□□□ -1.13
MRPL55-228ENST00000476267 FCER1GP30273 86 aa8□□□□□ -1.13
MRPL55-228ENST00000476267 RNF151Q2KHN1 245 aa8□□□□□ -1.13
MRPL55-228ENST00000476267 TRAV13-1A0A0B4J241 112 aa7.99□□□□□ -1.13
MRPL55-228ENST00000476267 ZNF727A8MUV8 499 aa7.99□□□□□ -1.13
MRPL55-228ENST00000476267 PPP1R17O96001 155 aa7.99□□□□□ -1.13
MRPL55-228ENST00000476267 RIGQ13278 110 aa7.99□□□□□ -1.13
MRPL55-228ENST00000476267 MRPL51Q4U2R6 128 aaKnown RBP7.99□□□□□ -1.13
MRPL55-228ENST00000476267 PHF5AQ7RTV0 110 aaKnown RBP7.99□□□□□ -1.13
MRPL55-228ENST00000476267 C5orf38Q86SI9 138 aa7.99□□□□□ -1.13
MRPL55-228ENST00000476267 KIR2DL4Q99706 377 aa7.99□□□□□ -1.13
MRPL55-228ENST00000476267 TRBV24-1A0A075B6N3 115 aa7.98□□□□□ -1.13
MRPL55-228ENST00000476267 PPP1R2P9O14990 202 aa7.98□□□□□ -1.13
MRPL55-228ENST00000476267 RPL32P62910 135 aaKnown RBP7.98□□□□□ -1.13
MRPL55-228ENST00000476267 RPL18AQ02543 176 aaKnown RBP7.98□□□□□ -1.13
MRPL55-228ENST00000476267 SPAG11BQ08648 103 aa7.98□□□□□ -1.13
MRPL55-228ENST00000476267 SMAGPQ0VAQ4 97 aa7.98□□□□□ -1.13
MRPL55-228ENST00000476267 FAM104BQ5XKR9 115 aa7.98□□□□□ -1.13
MRPL55-228ENST00000476267 OR10D4PQ8NGN7 298 aa7.98□□□□□ -1.13
MRPL55-228ENST00000476267 OPRPNQ99935 248 aaPredicted RBP7.98□□□□□ -1.13
MRPL55-228ENST00000476267 EIF5A2Q9GZV4 153 aaKnown RBP7.98□□□□□ -1.13
MRPL55-228ENST00000476267 IGHV3OR16-9A0A0B4J2B5 98 aa7.97□□□□□ -1.13
MRPL55-228ENST00000476267 MT-ND6P03923 174 aa7.97□□□□□ -1.13
MRPL55-228ENST00000476267 C1orf137Q5JT78 98 aa7.97□□□□□ -1.13
MRPL55-228ENST00000476267 KRTAP11-1Q8IUC1 163 aa7.97□□□□□ -1.13
MRPL55-228ENST00000476267 C20orf78Q9BR46 151 aa7.97□□□□□ -1.13
MRPL55-228ENST00000476267 MRPL35Q9NZE8 188 aaKnown RBP7.97□□□□□ -1.13
MRPL55-228ENST00000476267 NAT8BQ9UHF3 227 aa7.97□□□□□ -1.13
MRPL55-228ENST00000476267 TLX1NBP0CAT3 122 aa7.96□□□□□ -1.14
MRPL55-228ENST00000476267 RPL23P62829 140 aaKnown RBP7.96□□□□□ -1.14
MRPL55-228ENST00000476267 RPL39P62891 51 aaKnown RBP7.96□□□□□ -1.14
MRPL55-228ENST00000476267 FAM74A3Q4VXF1 159 aa7.96□□□□□ -1.14
MRPL55-228ENST00000476267 SMIM27A0A1W2PRY6 76 aa7.95□□□□□ -1.14
MRPL55-228ENST00000476267 FAM168BA1KXE4 195 aa7.95□□□□□ -1.14
MRPL55-228ENST00000476267 LINC00862A6NCI5 91 aa7.95□□□□□ -1.14
MRPL55-228ENST00000476267 F8WDY8 70 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms