RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 IGHV3-38A0A0C4DH36 116 aa12.73□□□□□ -0.37
ATG4B-217ENST00000475693 RHODO00212 210 aa12.73□□□□□ -0.37
ATG4B-217ENST00000475693 SUMO2P61956 95 aaKnown RBP12.73□□□□□ -0.37
ATG4B-217ENST00000475693 NEXN-AS1Q8NBZ9 246 aa12.73□□□□□ -0.37
ATG4B-217ENST00000475693 F8W1H4 67 aa12.73□□□□□ -0.37
ATG4B-217ENST00000475693 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-217ENST00000475693 ORMDL2Q53FV1 153 aa12.73□□□□□ -0.37
ATG4B-217ENST00000475693 A0A0J9YY99 117 aa12.72□□□□□ -0.37
ATG4B-217ENST00000475693 H7C1H1 209 aa12.72□□□□□ -0.37
ATG4B-217ENST00000475693 C20orf78Q9BR46 151 aa12.72□□□□□ -0.37
ATG4B-217ENST00000475693 SMIM2Q9BVW6 85 aa12.72□□□□□ -0.37
ATG4B-217ENST00000475693 TTTY13Q9BZ97 58 aa12.72□□□□□ -0.37
ATG4B-217ENST00000475693 FBN3Q75N90 2809 aa12.72□□□□□ -0.37
ATG4B-217ENST00000475693 SDHAF1A6NFY7 115 aa12.72□□□□□ -0.37
ATG4B-217ENST00000475693 F8VRH5 84 aa12.72□□□□□ -0.37
ATG4B-217ENST00000475693 Q6ZTC4 211 aa12.72□□□□□ -0.37
ATG4B-217ENST00000475693 B9D2Q9BPU9 175 aa12.72□□□□□ -0.37
ATG4B-217ENST00000475693 NHP2Q9NX24 153 aaKnown RBP12.72□□□□□ -0.37
ATG4B-217ENST00000475693 A0A1B0GWB2 263 aa12.71□□□□□ -0.37
ATG4B-217ENST00000475693 GAGE12JA6NER3 117 aa12.71□□□□□ -0.37
ATG4B-217ENST00000475693 GAGE4Q13068 117 aa12.71□□□□□ -0.37
ATG4B-217ENST00000475693 GAGE5Q13069 117 aa12.71□□□□□ -0.37
ATG4B-217ENST00000475693 GAGE13Q4V321 117 aa12.71□□□□□ -0.37
ATG4B-217ENST00000475693 ZNRF2Q8NHG8 242 aa12.71□□□□□ -0.37
ATG4B-217ENST00000475693 IGLL5B9A064 214 aa12.7□□□□□ -0.38
ATG4B-217ENST00000475693 K7EQD1 137 aa12.7□□□□□ -0.38
ATG4B-217ENST00000475693 F5H768 121 aa12.7□□□□□ -0.38
ATG4B-217ENST00000475693 POLR2KP53803 58 aaKnown RBP12.69□□□□□ -0.38
ATG4B-217ENST00000475693 TOMM6Q96B49 74 aa12.69□□□□□ -0.38
ATG4B-217ENST00000475693 C11orf68Q9H3H3 251 aaKnown RBP12.69□□□□□ -0.38
ATG4B-217ENST00000475693 A0A096LPF7 62 aa12.69□□□□□ -0.38
ATG4B-217ENST00000475693 MAPKAPK5-AS1Q8N8E1 139 aa12.69□□□□□ -0.38
ATG4B-217ENST00000475693 TNFRSF18Q9Y5U5 241 aa12.69□□□□□ -0.38
ATG4B-217ENST00000475693 K7ERJ3 54 aa12.68□□□□□ -0.38
ATG4B-217ENST00000475693 TRBV7-3A0A075B6L6 115 aa12.68□□□□□ -0.38
ATG4B-217ENST00000475693 J3QR89 54 aa12.68□□□□□ -0.38
ATG4B-217ENST00000475693 PPP1R17O96001 155 aa12.68□□□□□ -0.38
ATG4B-217ENST00000475693 ATP5G1P05496 136 aa12.68□□□□□ -0.38
ATG4B-217ENST00000475693 SCGB1A1P11684 91 aa12.68□□□□□ -0.38
ATG4B-217ENST00000475693 C11orf45Q8TAV5 145 aa12.68□□□□□ -0.38
ATG4B-217ENST00000475693 TGP01266 2768 aa12.67□□□□□ -0.38
ATG4B-217ENST00000475693 TEX48A0A1B0GUV7 120 aa12.67□□□□□ -0.38
ATG4B-217ENST00000475693 VSIG2Q96IQ7 327 aa12.67□□□□□ -0.38
ATG4B-217ENST00000475693 TRAV26-1A0A087WT03 109 aa12.66□□□□□ -0.38
ATG4B-217ENST00000475693 LINC01549A6NIU2 74 aa12.66□□□□□ -0.38
ATG4B-217ENST00000475693 CRYBA4P53673 196 aa12.66□□□□□ -0.38
ATG4B-217ENST00000475693 TRBV6-5A0A0K0K1A5 114 aa12.66□□□□□ -0.38
ATG4B-217ENST00000475693 MYMXA0A1B0GTQ4 84 aa12.66□□□□□ -0.38
ATG4B-217ENST00000475693 RPL24P83731 157 aaKnown RBP12.66□□□□□ -0.38
ATG4B-217ENST00000475693 HIST1H4GQ99525 98 aa12.66□□□□□ -0.38
ATG4B-217ENST00000475693 TRBV6-4A0A1B0GX49 114 aa12.65□□□□□ -0.38
ATG4B-217ENST00000475693 GYPEP15421 78 aa12.65□□□□□ -0.38
ATG4B-217ENST00000475693 SCGB3A1Q96QR1 104 aa12.65□□□□□ -0.38
ATG4B-217ENST00000475693 EDA2RQ9HAV5 297 aa12.65□□□□□ -0.38
ATG4B-217ENST00000475693 CSMD3Q7Z407 3707 aa12.64□□□□□ -0.39
ATG4B-217ENST00000475693 SPANXB1Q9NS25 103 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-217ENST00000475693 PAX4O43316 350 aa12.64□□□□□ -0.39
ATG4B-217ENST00000475693 RPL32P62910 135 aaKnown RBP12.64□□□□□ -0.39
ATG4B-217ENST00000475693 PRO0255Q9UI72 69 aa12.64□□□□□ -0.39
ATG4B-217ENST00000475693 TRBV27A0A0K0K1C4 114 aa12.63□□□□□ -0.39
ATG4B-217ENST00000475693 VCYO14598 125 aa12.63□□□□□ -0.39
ATG4B-217ENST00000475693 TSHBP01222 138 aa12.63□□□□□ -0.39
ATG4B-217ENST00000475693 RPL36AP83881 106 aaKnown RBP12.62□□□□□ -0.39
ATG4B-217ENST00000475693 RHOHQ15669 191 aa12.62□□□□□ -0.39
ATG4B-217ENST00000475693 RPL36ALQ969Q0 106 aaKnown RBP12.62□□□□□ -0.39
ATG4B-217ENST00000475693 I3L3M4 83 aa12.61□□□□□ -0.39
ATG4B-217ENST00000475693 UBE2D3P61077 147 aa12.61□□□□□ -0.39
ATG4B-217ENST00000475693 UBE2D2P62837 147 aa12.61□□□□□ -0.39
ATG4B-217ENST00000475693 RPL39P62891 51 aaKnown RBP12.61□□□□□ -0.39
ATG4B-217ENST00000475693 PRADC1Q9BSG0 188 aa12.61□□□□□ -0.39
ATG4B-217ENST00000475693 LYSTQ99698 3801 aa12.61□□□□□ -0.39
ATG4B-217ENST00000475693 TRBV10-1A0A0K0K1A3 114 aa12.6□□□□□ -0.39
ATG4B-217ENST00000475693 PAPPA-AS1Q5QFB9 102 aa12.6□□□□□ -0.39
ATG4B-217ENST00000475693 C2orf66Q6UXQ4 117 aa12.6□□□□□ -0.39
ATG4B-217ENST00000475693 BAALCQ8WXS3 180 aa12.6□□□□□ -0.39
ATG4B-217ENST00000475693 SIGMAR1Q99720 223 aa12.6□□□□□ -0.39
ATG4B-217ENST00000475693 NTM-AS1Q6ZSK4 140 aa12.6□□□□□ -0.39
ATG4B-217ENST00000475693 DNAJC30Q96LL9 226 aa12.6□□□□□ -0.39
ATG4B-217ENST00000475693 KIR2DL4Q99706 377 aa12.6□□□□□ -0.39
ATG4B-217ENST00000475693 PRO0461Q9UI25 63 aa12.6□□□□□ -0.39
ATG4B-217ENST00000475693 DEFB131BA0A096LNP1 70 aa12.59□□□□□ -0.39
ATG4B-217ENST00000475693 WFDC2Q14508 124 aa12.59□□□□□ -0.39
ATG4B-217ENST00000475693 H3BMG7 143 aa12.58□□□□□ -0.39
ATG4B-217ENST00000475693 PRSS29PA6NIE9 313 aa12.57□□□□□ -0.4
ATG4B-217ENST00000475693 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-217ENST00000475693 IGKV2-29A2NJV5 120 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-217ENST00000475693 GAGE12HA6NDE8 117 aa12.57□□□□□ -0.4
ATG4B-217ENST00000475693 CEMP1Q6PRD7 247 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-217ENST00000475693 LINC00694P0DN24 101 aa12.56□□□□□ -0.4
ATG4B-217ENST00000475693 ATP6V0E2Q8NHE4 81 aa12.56□□□□□ -0.4
ATG4B-217ENST00000475693 DNAH7Q8WXX0 4024 aa12.56□□□□□ -0.4
ATG4B-217ENST00000475693 UBE2D1P51668 147 aa12.56□□□□□ -0.4
ATG4B-217ENST00000475693 CHCHD7Q9BUK0 85 aa12.56□□□□□ -0.4
ATG4B-217ENST00000475693 TENM2Q9NT68 2774 aa12.55□□□□□ -0.4
ATG4B-217ENST00000475693 OPRPNQ99935 248 aaPredicted RBP12.55□□□□□ -0.4
ATG4B-217ENST00000475693 CYSLTR1Q9Y271 337 aa12.55□□□□□ -0.4
ATG4B-217ENST00000475693 ETDBQ3ZM63 59 aa12.54□□□□□ -0.4
ATG4B-217ENST00000475693 ZNF815PA8K554 130 aa12.53□□□□□ -0.4
ATG4B-217ENST00000475693 NHLRC4P0CG21 123 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-217ENST00000475693 LYRM7Q5U5X0 104 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms