RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 XCL1P47992 114 aa4.39□□□□□ -1.71
HDAC3-207ENST00000475549 POLR2KP53803 58 aaKnown RBP4.39□□□□□ -1.71
HDAC3-207ENST00000475549 MAJINQ3KP22 176 aa4.39□□□□□ -1.71
HDAC3-207ENST00000475549 AMMECR1LQ6DCA0 310 aa4.39□□□□□ -1.71
HDAC3-207ENST00000475549 CFAP161Q6P656 301 aa4.39□□□□□ -1.71
HDAC3-207ENST00000475549 TEX261Q6UWH6 196 aa4.39□□□□□ -1.71
HDAC3-207ENST00000475549 LINC01551Q86U37 167 aa4.39□□□□□ -1.71
HDAC3-207ENST00000475549 RNF213Q63HN8 5207 aa4.39□□□□□ -1.71
HDAC3-207ENST00000475549 LRP2P98164 4655 aa4.39□□□□□ -1.71
HDAC3-207ENST00000475549 TRBV27A0A0K0K1C4 114 aa4.38□□□□□ -1.71
HDAC3-207ENST00000475549 HIGD1CA8MV81 97 aa4.38□□□□□ -1.71
HDAC3-207ENST00000475549 A8MWL6 223 aa4.38□□□□□ -1.71
HDAC3-207ENST00000475549 CCL25O15444 150 aa4.38□□□□□ -1.71
HDAC3-207ENST00000475549 APCSP02743 223 aa4.38□□□□□ -1.71
HDAC3-207ENST00000475549 ZNF25P17030 456 aaPredicted RBP4.38□□□□□ -1.71
HDAC3-207ENST00000475549 CEBPGP53567 150 aa4.38□□□□□ -1.71
HDAC3-207ENST00000475549 BLOC1S1P78537 153 aa4.38□□□□□ -1.71
HDAC3-207ENST00000475549 PRR3P79522 188 aaKnown RBP4.38□□□□□ -1.71
HDAC3-207ENST00000475549 CT83Q5H943 113 aa4.38□□□□□ -1.71
HDAC3-207ENST00000475549 AMN1Q8IY45 258 aa4.38□□□□□ -1.71
HDAC3-207ENST00000475549 STPG4Q8N801 248 aa4.38□□□□□ -1.71
HDAC3-207ENST00000475549 OR5A1Q8NGJ0 315 aa4.38□□□□□ -1.71
HDAC3-207ENST00000475549 TSKUQ8WUA8 353 aa4.38□□□□□ -1.71
HDAC3-207ENST00000475549 TMEM191AQ9H0A3 160 aa4.38□□□□□ -1.71
HDAC3-207ENST00000475549 CDC42SE2Q9NRR3 84 aa4.38□□□□□ -1.71
HDAC3-207ENST00000475549 TMEM242Q9NWH2 141 aa4.38□□□□□ -1.71
HDAC3-207ENST00000475549 TNXBP22105 4242 aa4.37□□□□□ -1.71
HDAC3-207ENST00000475549 A0A1B0GUT8 65 aa4.37□□□□□ -1.71
HDAC3-207ENST00000475549 C9JQL5 133 aa4.37□□□□□ -1.71
HDAC3-207ENST00000475549 SMKR1H3BMG3 65 aa4.37□□□□□ -1.71
HDAC3-207ENST00000475549 SRP19P09132 144 aaKnown RBP4.37□□□□□ -1.71
HDAC3-207ENST00000475549 PMCHP20382 165 aa4.37□□□□□ -1.71
HDAC3-207ENST00000475549 SRSF9Q13242 221 aaKnown RBP eCLIP4.37□□□□□ -1.71
HDAC3-207ENST00000475549 SMIM15Q7Z3B0 74 aa4.37□□□□□ -1.71
HDAC3-207ENST00000475549 MRPL52Q86TS9 123 aaKnown RBP4.37□□□□□ -1.71
HDAC3-207ENST00000475549 ZNF664Q8N3J9 261 aa4.37□□□□□ -1.71
HDAC3-207ENST00000475549 NRACQ8N912 160 aa4.37□□□□□ -1.71
HDAC3-207ENST00000475549 FAM104AQ969W3 186 aa4.37□□□□□ -1.71
HDAC3-207ENST00000475549 LINC01600Q96MT4 127 aa4.37□□□□□ -1.71
HDAC3-207ENST00000475549 ST20Q9HBF5 79 aa4.37□□□□□ -1.71
HDAC3-207ENST00000475549 V9GYV3 84 aa4.37□□□□□ -1.71
HDAC3-207ENST00000475549 KRTAP10-8P60410 259 aa4.36□□□□□ -1.71
HDAC3-207ENST00000475549 CD164L2Q6UWJ8 174 aa4.36□□□□□ -1.71
HDAC3-207ENST00000475549 AKAP14Q86UN6 197 aa4.36□□□□□ -1.71
HDAC3-207ENST00000475549 NUP35Q8NFH5 326 aa4.36□□□□□ -1.71
HDAC3-207ENST00000475549 C7orf33Q8WU49 177 aa4.36□□□□□ -1.71
HDAC3-207ENST00000475549 FAM210AQ96ND0 272 aa4.36□□□□□ -1.71
HDAC3-207ENST00000475549 SMIM7Q9BQ49 75 aa4.36□□□□□ -1.71
HDAC3-207ENST00000475549 EIF5A2Q9GZV4 153 aaKnown RBP4.36□□□□□ -1.71
HDAC3-207ENST00000475549 OSTCQ9NRP0 149 aa4.36□□□□□ -1.71
HDAC3-207ENST00000475549 IGLV4-69A0A075B6H9 119 aa4.35□□□□□ -1.71
HDAC3-207ENST00000475549 IGHV1-58A0A0C4DH39 117 aa4.35□□□□□ -1.71
HDAC3-207ENST00000475549 A0A1W2PNN7 141 aa4.35□□□□□ -1.71
HDAC3-207ENST00000475549 ZNF727A8MUV8 499 aa4.35□□□□□ -1.71
HDAC3-207ENST00000475549 VCYO14598 125 aa4.35□□□□□ -1.71
HDAC3-207ENST00000475549 SRSF3P84103 164 aaKnown RBP4.35□□□□□ -1.71
HDAC3-207ENST00000475549 RNASE13Q5GAN3 156 aaKnown RBP4.35□□□□□ -1.71
HDAC3-207ENST00000475549 ISOC2Q96AB3 205 aa4.35□□□□□ -1.71
HDAC3-207ENST00000475549 MRAP2Q96G30 205 aa4.35□□□□□ -1.71
HDAC3-207ENST00000475549 TMEM101Q96IK0 257 aa4.35□□□□□ -1.71
HDAC3-207ENST00000475549 BTF3L4Q96K17 158 aa4.35□□□□□ -1.71
HDAC3-207ENST00000475549 UBE2D4Q9Y2X8 147 aa4.35□□□□□ -1.71
HDAC3-207ENST00000475549 CSDC2Q9Y534 153 aaKnown RBP4.35□□□□□ -1.71
HDAC3-207ENST00000475549 C7orf77A4D0Y5 90 aa4.34□□□□□ -1.71
HDAC3-207ENST00000475549 PTTG1IPP53801 180 aa4.34□□□□□ -1.71
HDAC3-207ENST00000475549 SUMO2P61956 95 aaKnown RBP4.34□□□□□ -1.71
HDAC3-207ENST00000475549 RPL23P62829 140 aaKnown RBP4.34□□□□□ -1.71
HDAC3-207ENST00000475549 SYCNQ0VAF6 134 aa4.34□□□□□ -1.71
HDAC3-207ENST00000475549 SS18Q15532 418 aa4.34□□□□□ -1.71
HDAC3-207ENST00000475549 MRPL51Q4U2R6 128 aaKnown RBP4.34□□□□□ -1.71
HDAC3-207ENST00000475549 CARD19Q96LW7 228 aa4.34□□□□□ -1.71
HDAC3-207ENST00000475549 CDIP1Q9H305 208 aa4.34□□□□□ -1.71
HDAC3-207ENST00000475549 TRAV13-1A0A0B4J241 112 aa4.33□□□□□ -1.72
HDAC3-207ENST00000475549 A0A0J9YXV3 536 aa4.33□□□□□ -1.72
HDAC3-207ENST00000475549 A0A1B0GVG6 124 aa4.33□□□□□ -1.72
HDAC3-207ENST00000475549 SMIM27A0A1W2PRY6 76 aa4.33□□□□□ -1.72
HDAC3-207ENST00000475549 C1orf196B1AJZ1 125 aa4.33□□□□□ -1.72
HDAC3-207ENST00000475549 ZNF561-AS1K7EIQ3 104 aa4.33□□□□□ -1.72
HDAC3-207ENST00000475549 RIGQ13278 110 aa4.33□□□□□ -1.72
HDAC3-207ENST00000475549 TMEM241Q24JQ0 296 aa4.33□□□□□ -1.72
HDAC3-207ENST00000475549 FAM104BQ5XKR9 115 aa4.33□□□□□ -1.72
HDAC3-207ENST00000475549 SPINK6Q6UWN8 80 aa4.33□□□□□ -1.72
HDAC3-207ENST00000475549 BORCS7Q96B45 105 aa4.33□□□□□ -1.72
HDAC3-207ENST00000475549 OPRPNQ99935 248 aaPredicted RBP4.33□□□□□ -1.72
HDAC3-207ENST00000475549 LINC00474Q9P2X8 69 aa4.33□□□□□ -1.72
HDAC3-207ENST00000475549 TRBV24-1A0A075B6N3 115 aa4.32□□□□□ -1.72
HDAC3-207ENST00000475549 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.32□□□□□ -1.72
HDAC3-207ENST00000475549 COX7A2LO14548 114 aa4.32□□□□□ -1.72
HDAC3-207ENST00000475549 CAMPP49913 170 aa4.32□□□□□ -1.72
HDAC3-207ENST00000475549 RPL39P62891 51 aaKnown RBP4.32□□□□□ -1.72
HDAC3-207ENST00000475549 GAGE2BQ13066 116 aa4.32□□□□□ -1.72
HDAC3-207ENST00000475549 FAM74A3Q4VXF1 159 aa4.32□□□□□ -1.72
HDAC3-207ENST00000475549 XP32Q5T750 250 aa4.32□□□□□ -1.72
HDAC3-207ENST00000475549 Q6ZUT4 128 aa4.32□□□□□ -1.72
HDAC3-207ENST00000475549 C5orf38Q86SI9 138 aa4.32□□□□□ -1.72
HDAC3-207ENST00000475549 NAT8BQ9UHF3 227 aa4.32□□□□□ -1.72
HDAC3-207ENST00000475549 TNFRSF6BO95407 300 aa4.31□□□□□ -1.72
HDAC3-207ENST00000475549 MALP21145 153 aa4.31□□□□□ -1.72
HDAC3-207ENST00000475549 FCER1GP30273 86 aa4.31□□□□□ -1.72
HDAC3-207ENST00000475549 C10orf25Q5T742 122 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms