RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 ABCA13Q86UQ4 5058 aa13.14□□□□□ -0.31
HLA-B-252ENST00000474381 IGKV3OR2-268A0A0C4DH90 116 aa13.13□□□□□ -0.31
HLA-B-252ENST00000474381 TMEM218A2RU14 115 aa13.13□□□□□ -0.31
HLA-B-252ENST00000474381 GAGE12HA6NDE8 117 aa13.12□□□□□ -0.31
HLA-B-252ENST00000474381 CHCHD10Q8WYQ3 142 aaPredicted RBP13.12□□□□□ -0.31
HLA-B-252ENST00000474381 CDC42SE2Q9NRR3 84 aa13.12□□□□□ -0.31
HLA-B-252ENST00000474381 CSDC2Q9Y534 153 aaKnown RBP13.12□□□□□ -0.31
HLA-B-252ENST00000474381 DNAH8Q96JB1 4490 aa13.12□□□□□ -0.31
HLA-B-252ENST00000474381 ADCYAP1P18509 176 aa13.11□□□□□ -0.31
HLA-B-252ENST00000474381 CNBPP62633 177 aaKnown RBP13.11□□□□□ -0.31
HLA-B-252ENST00000474381 HAMPP81172 84 aa13.11□□□□□ -0.31
HLA-B-252ENST00000474381 ORMDL3Q8N138 153 aa13.11□□□□□ -0.31
HLA-B-252ENST00000474381 SMIM2Q9BVW6 85 aa13.11□□□□□ -0.31
HLA-B-252ENST00000474381 Q5VSD8 79 aa13.1□□□□□ -0.31
HLA-B-252ENST00000474381 CFAP161Q6P656 301 aa13.1□□□□□ -0.31
HLA-B-252ENST00000474381 ZNF664Q8N3J9 261 aa13.1□□□□□ -0.31
HLA-B-252ENST00000474381 C9orf163Q8N9P6 203 aa13.1□□□□□ -0.31
HLA-B-252ENST00000474381 TMEM18Q96B42 140 aa13.1□□□□□ -0.31
HLA-B-252ENST00000474381 IMMP2LQ96T52 175 aa13.1□□□□□ -0.31
HLA-B-252ENST00000474381 LINC00959A0A1B0GUT2 108 aa13.09□□□□□ -0.31
HLA-B-252ENST00000474381 NPYP01303 97 aa13.09□□□□□ -0.31
HLA-B-252ENST00000474381 SMR3BP02814 79 aaPredicted RBP13.09□□□□□ -0.31
HLA-B-252ENST00000474381 TMEM136Q6ZRR5 245 aa13.09□□□□□ -0.31
HLA-B-252ENST00000474381 TIMM21Q9BVV7 248 aa13.09□□□□□ -0.31
HLA-B-252ENST00000474381 SEC11CQ9BY50 192 aa13.09□□□□□ -0.31
HLA-B-252ENST00000474381 UBE2D4Q9Y2X8 147 aa13.09□□□□□ -0.31
HLA-B-252ENST00000474381 hDV102S1A0JD36 115 aa13.08□□□□□ -0.32
HLA-B-252ENST00000474381 FAM229AH3BQW9 127 aa13.08□□□□□ -0.32
HLA-B-252ENST00000474381 CHAC1Q9BUX1 264 aa13.08□□□□□ -0.32
HLA-B-252ENST00000474381 CTDSP1Q9GZU7 261 aa13.08□□□□□ -0.32
HLA-B-252ENST00000474381 AP5S1Q9NUS5 200 aa13.08□□□□□ -0.32
HLA-B-252ENST00000474381 LAMTOR2Q9Y2Q5 125 aa13.08□□□□□ -0.32
HLA-B-252ENST00000474381 C15orf56Q8N910 161 aa13.07□□□□□ -0.32
HLA-B-252ENST00000474381 PRELID3AQ96N28 172 aa13.07□□□□□ -0.32
HLA-B-252ENST00000474381 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.06□□□□□ -0.32
HLA-B-252ENST00000474381 CCL25O15444 150 aa13.06□□□□□ -0.32
HLA-B-252ENST00000474381 FOXI1Q12951 378 aa13.06□□□□□ -0.32
HLA-B-252ENST00000474381 SS18Q15532 418 aa13.06□□□□□ -0.32
HLA-B-252ENST00000474381 SCXQ7RTU7 201 aa13.06□□□□□ -0.32
HLA-B-252ENST00000474381 COMMD7Q86VX2 200 aa13.06□□□□□ -0.32
HLA-B-252ENST00000474381 FAT1Q14517 4588 aa13.05□□□□□ -0.32
HLA-B-252ENST00000474381 PRSS47A8MTI9 375 aa13.05□□□□□ -0.32
HLA-B-252ENST00000474381 TRAV9-1A0A075B6T8 112 aa13.04□□□□□ -0.32
HLA-B-252ENST00000474381 XCL1P47992 114 aa13.04□□□□□ -0.32
HLA-B-252ENST00000474381 C1orf196B1AJZ1 125 aa13.03□□□□□ -0.32
HLA-B-252ENST00000474381 CD164L2Q6UWJ8 174 aa13.03□□□□□ -0.32
HLA-B-252ENST00000474381 SPANXA1Q9NS26 97 aa13.03□□□□□ -0.32
HLA-B-252ENST00000474381 GVQW2A0A096LPI5 108 aaPredicted RBP13.02□□□□□ -0.33
HLA-B-252ENST00000474381 RAB5AP20339 215 aa13.02□□□□□ -0.33
HLA-B-252ENST00000474381 SDIM1Q6ZPB5 146 aa13.02□□□□□ -0.33
HLA-B-252ENST00000474381 SLPIP03973 132 aa13.01□□□□□ -0.33
HLA-B-252ENST00000474381 CIRBP-AS1Q8TBR5 109 aa13.01□□□□□ -0.33
HLA-B-252ENST00000474381 MAP1LC3AQ9H492 121 aa13.01□□□□□ -0.33
HLA-B-252ENST00000474381 VPS13BQ7Z7G8 4022 aa13□□□□□ -0.33
HLA-B-252ENST00000474381 IGHV3-64A0A075B6Q5 118 aa13□□□□□ -0.33
HLA-B-252ENST00000474381 IGHV1-58A0A0C4DH39 117 aa13□□□□□ -0.33
HLA-B-252ENST00000474381 RPL39P62891 51 aaKnown RBP13□□□□□ -0.33
HLA-B-252ENST00000474381 C10orf91Q5T1B1 145 aa13□□□□□ -0.33
HLA-B-252ENST00000474381 Q6ZUT4 128 aa13□□□□□ -0.33
HLA-B-252ENST00000474381 MRPS36P82909 103 aaKnown RBP12.99□□□□□ -0.33
HLA-B-252ENST00000474381 HIGD2BQ4VC39 106 aa12.99□□□□□ -0.33
HLA-B-252ENST00000474381 LINC00528Q8N1L1 170 aa12.99□□□□□ -0.33
HLA-B-252ENST00000474381 INAFM2P0DMQ5 153 aa12.98□□□□□ -0.33
HLA-B-252ENST00000474381 S100PP25815 95 aa12.98□□□□□ -0.33
HLA-B-252ENST00000474381 CARHSP1Q9Y2V2 147 aaKnown RBP12.98□□□□□ -0.33
HLA-B-252ENST00000474381 TRAV13-1A0A0B4J241 112 aa12.97□□□□□ -0.33
HLA-B-252ENST00000474381 PLA2G1BP04054 148 aaKnown RBP12.97□□□□□ -0.33
HLA-B-252ENST00000474381 RNASE13Q5GAN3 156 aaKnown RBP12.97□□□□□ -0.33
HLA-B-252ENST00000474381 K7EMI3 77 aa12.96□□□□□ -0.33
HLA-B-252ENST00000474381 CIRBPQ14011 172 aaKnown RBP12.96□□□□□ -0.33
HLA-B-252ENST00000474381 Q8N8P6 123 aa12.96□□□□□ -0.33
HLA-B-252ENST00000474381 PYGO1Q9Y3Y4 419 aa12.96□□□□□ -0.33
HLA-B-252ENST00000474381 LOC389332A0A1B0GUA5 103 aa12.95□□□□□ -0.34
HLA-B-252ENST00000474381 COX7A2LO14548 114 aa12.95□□□□□ -0.34
HLA-B-252ENST00000474381 IFI27P40305 119 aaPredicted RBP12.95□□□□□ -0.34
HLA-B-252ENST00000474381 RHEBQ15382 184 aa12.95□□□□□ -0.34
HLA-B-252ENST00000474381 FAM104AQ969W3 186 aa12.95□□□□□ -0.34
HLA-B-252ENST00000474381 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.95□□□□□ -0.34
HLA-B-252ENST00000474381 NXT2Q9NPJ8 142 aaKnown RBP12.94□□□□□ -0.34
HLA-B-252ENST00000474381 MALP21145 153 aa12.93□□□□□ -0.34
HLA-B-252ENST00000474381 COX19Q49B96 90 aa12.93□□□□□ -0.34
HLA-B-252ENST00000474381 ORMDL2Q53FV1 153 aa12.93□□□□□ -0.34
HLA-B-252ENST00000474381 GNB1LQ9BYB4 327 aa12.93□□□□□ -0.34
HLA-B-252ENST00000474381 PKIGQ9Y2B9 76 aa12.92□□□□□ -0.34
HLA-B-252ENST00000474381 PANO1I0J062 215 aa12.91□□□□□ -0.34
HLA-B-252ENST00000474381 ZNF561-AS1K7EIQ3 104 aa12.91□□□□□ -0.34
HLA-B-252ENST00000474381 OPRPNQ99935 248 aaPredicted RBP12.91□□□□□ -0.34
HLA-B-252ENST00000474381 CYSLTR1Q9Y271 337 aa12.91□□□□□ -0.34
HLA-B-252ENST00000474381 IFITM10A6NMD0 228 aa12.9□□□□□ -0.34
HLA-B-252ENST00000474381 RPS10P5Q9NQ39 176 aa12.9□□□□□ -0.34
HLA-B-252ENST00000474381 SRRM2Q9UQ35 2752 aaKnown RBP12.9□□□□□ -0.34
HLA-B-252ENST00000474381 IGLV4-3A0A075B6K6 122 aa12.89□□□□□ -0.35
HLA-B-252ENST00000474381 APOMO95445 188 aa12.89□□□□□ -0.35
HLA-B-252ENST00000474381 MT-ND6P03923 174 aa12.89□□□□□ -0.35
HLA-B-252ENST00000474381 NPSP0C0P6 89 aa12.89□□□□□ -0.35
HLA-B-252ENST00000474381 COX6A2Q02221 97 aa12.89□□□□□ -0.35
HLA-B-252ENST00000474381 C2orf66Q6UXQ4 117 aa12.89□□□□□ -0.35
HLA-B-252ENST00000474381 SPACA4Q8TDM5 124 aa12.89□□□□□ -0.35
HLA-B-252ENST00000474381 G0S2P27469 103 aa12.88□□□□□ -0.35
HLA-B-252ENST00000474381 KIAA1644Q3SXP7 199 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms