RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 NIT2Q9NQR4 276 aa7.35□□□□□ -1.23
SEMA4D-216ENST00000474258 PMCHP20382 165 aa7.34□□□□□ -1.23
SEMA4D-216ENST00000474258 IFI27P40305 119 aaPredicted RBP7.34□□□□□ -1.23
SEMA4D-216ENST00000474258 DAZ4Q86SG3 579 aaKnown RBP7.34□□□□□ -1.23
SEMA4D-216ENST00000474258 Q8N3U1 123 aa7.34□□□□□ -1.23
SEMA4D-216ENST00000474258 DNAJC30Q96LL9 226 aa7.34□□□□□ -1.23
SEMA4D-216ENST00000474258 ST20Q9HBF5 79 aa7.34□□□□□ -1.23
SEMA4D-216ENST00000474258 DAZ3Q9NR90 486 aaKnown RBP7.34□□□□□ -1.23
SEMA4D-216ENST00000474258 Q9UF83 564 aa7.34□□□□□ -1.23
SEMA4D-216ENST00000474258 COX11Q9Y6N1 276 aa7.34□□□□□ -1.23
SEMA4D-216ENST00000474258 TRBV10-1A0A0K0K1A3 114 aa7.33□□□□□ -1.24
SEMA4D-216ENST00000474258 TRBV27A0A0K0K1C4 114 aa7.33□□□□□ -1.24
SEMA4D-216ENST00000474258 LOC389332A0A1B0GUA5 103 aa7.33□□□□□ -1.24
SEMA4D-216ENST00000474258 K7EMI3 77 aa7.33□□□□□ -1.24
SEMA4D-216ENST00000474258 VCYO14598 125 aa7.33□□□□□ -1.24
SEMA4D-216ENST00000474258 RNASEKQ6P5S7 137 aaKnown RBP7.33□□□□□ -1.24
SEMA4D-216ENST00000474258 FA2HQ7L5A8 372 aa7.33□□□□□ -1.24
SEMA4D-216ENST00000474258 HIST1H2BLQ99880 126 aa7.33□□□□□ -1.24
SEMA4D-216ENST00000474258 SMIM2Q9BVW6 85 aa7.33□□□□□ -1.24
SEMA4D-216ENST00000474258 AP5S1Q9NUS5 200 aa7.33□□□□□ -1.24
SEMA4D-216ENST00000474258 FAM30AQ9NZY2 134 aa7.33□□□□□ -1.24
SEMA4D-216ENST00000474258 FLG2Q5D862 2391 aaPredicted RBP7.32□□□□□ -1.24
SEMA4D-216ENST00000474258 HSBP1O75506 76 aa7.32□□□□□ -1.24
SEMA4D-216ENST00000474258 S100A2P29034 98 aa7.32□□□□□ -1.24
SEMA4D-216ENST00000474258 WFDC2Q14508 124 aa7.32□□□□□ -1.24
SEMA4D-216ENST00000474258 TMEM18Q96B42 140 aa7.32□□□□□ -1.24
SEMA4D-216ENST00000474258 RMI2Q96E14 147 aa7.32□□□□□ -1.24
SEMA4D-216ENST00000474258 VPS13BQ7Z7G8 4022 aa7.31□□□□□ -1.24
SEMA4D-216ENST00000474258 LECT2O14960 151 aa7.31□□□□□ -1.24
SEMA4D-216ENST00000474258 PDZD11Q5EBL8 140 aa7.31□□□□□ -1.24
SEMA4D-216ENST00000474258 NEXN-AS1Q8NBZ9 246 aa7.31□□□□□ -1.24
SEMA4D-216ENST00000474258 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.3□□□□□ -1.24
SEMA4D-216ENST00000474258 SDHAF1A6NFY7 115 aa7.3□□□□□ -1.24
SEMA4D-216ENST00000474258 RPL36AP83881 106 aaKnown RBP7.3□□□□□ -1.24
SEMA4D-216ENST00000474258 Q8N976 141 aa7.3□□□□□ -1.24
SEMA4D-216ENST00000474258 BAALCQ8WXS3 180 aa7.3□□□□□ -1.24
SEMA4D-216ENST00000474258 RPL36ALQ969Q0 106 aaKnown RBP7.3□□□□□ -1.24
SEMA4D-216ENST00000474258 CHCHD7Q9BUK0 85 aa7.3□□□□□ -1.24
SEMA4D-216ENST00000474258 KLK12Q9UKR0 248 aa7.3□□□□□ -1.24
SEMA4D-216ENST00000474258 TRBV7-3A0A075B6L6 115 aa7.29□□□□□ -1.24
SEMA4D-216ENST00000474258 IGKV2D-24A0A075B6R9 120 aa7.29□□□□□ -1.24
SEMA4D-216ENST00000474258 A0A087WX48 190 aa7.29□□□□□ -1.24
SEMA4D-216ENST00000474258 A0A096LNJ9 63 aa7.29□□□□□ -1.24
SEMA4D-216ENST00000474258 IGHV1-24A0A0C4DH33 117 aa7.29□□□□□ -1.24
SEMA4D-216ENST00000474258 TCAPO15273 167 aa7.29□□□□□ -1.24
SEMA4D-216ENST00000474258 FABP4P15090 132 aa7.29□□□□□ -1.24
SEMA4D-216ENST00000474258 FCER1GP30273 86 aa7.29□□□□□ -1.24
SEMA4D-216ENST00000474258 AMTP48728 403 aa7.29□□□□□ -1.24
SEMA4D-216ENST00000474258 Q6ZSA8 131 aa7.29□□□□□ -1.24
SEMA4D-216ENST00000474258 FAM19A2Q8N3H0 131 aa7.29□□□□□ -1.24
SEMA4D-216ENST00000474258 DNAH8Q96JB1 4490 aa7.28□□□□□ -1.24
SEMA4D-216ENST00000474258 DMBT1Q9UGM3 2413 aaPredicted RBP7.28□□□□□ -1.24
SEMA4D-216ENST00000474258 I3L3M4 83 aa7.28□□□□□ -1.24
SEMA4D-216ENST00000474258 PLA2G1BP04054 148 aaKnown RBP7.28□□□□□ -1.24
SEMA4D-216ENST00000474258 UBE2D3P61077 147 aa7.28□□□□□ -1.24
SEMA4D-216ENST00000474258 UBE2D2P62837 147 aa7.28□□□□□ -1.24
SEMA4D-216ENST00000474258 ORMDL2Q53FV1 153 aa7.28□□□□□ -1.24
SEMA4D-216ENST00000474258 KIR2DL4Q99706 377 aa7.28□□□□□ -1.24
SEMA4D-216ENST00000474258 TSHBP01222 138 aa7.27□□□□□ -1.25
SEMA4D-216ENST00000474258 HBDP02042 147 aa7.27□□□□□ -1.25
SEMA4D-216ENST00000474258 G0S2P27469 103 aa7.27□□□□□ -1.25
SEMA4D-216ENST00000474258 OR10D4PQ8NGN7 298 aa7.27□□□□□ -1.25
SEMA4D-216ENST00000474258 UBE2WQ96B02 151 aa7.27□□□□□ -1.25
SEMA4D-216ENST00000474258 LINC01549A6NIU2 74 aa7.26□□□□□ -1.25
SEMA4D-216ENST00000474258 TMEM262E9PQX1 116 aa7.26□□□□□ -1.25
SEMA4D-216ENST00000474258 PMCHL1Q16048 86 aa7.26□□□□□ -1.25
SEMA4D-216ENST00000474258 LINC00528Q8N1L1 170 aa7.26□□□□□ -1.25
SEMA4D-216ENST00000474258 HSPB8Q9UJY1 196 aa7.26□□□□□ -1.25
SEMA4D-216ENST00000474258 HERC1Q15751 4861 aa7.26□□□□□ -1.25
SEMA4D-216ENST00000474258 TRBV6-8A0A0A6YYG3 113 aa7.25□□□□□ -1.25
SEMA4D-216ENST00000474258 LEPROTL1O95214 131 aa7.25□□□□□ -1.25
SEMA4D-216ENST00000474258 LINC01620Q4KN68 170 aa7.25□□□□□ -1.25
SEMA4D-216ENST00000474258 TOMM6Q96B49 74 aa7.25□□□□□ -1.25
SEMA4D-216ENST00000474258 SRRM2Q9UQ35 2752 aaKnown RBP7.25□□□□□ -1.25
SEMA4D-216ENST00000474258 J3QL48 77 aa7.24□□□□□ -1.25
SEMA4D-216ENST00000474258 AKR1D1P51857 326 aa7.24□□□□□ -1.25
SEMA4D-216ENST00000474258 PKIAP61925 76 aa7.24□□□□□ -1.25
SEMA4D-216ENST00000474258 JOSD1Q15040 202 aaPredicted RBP7.24□□□□□ -1.25
SEMA4D-216ENST00000474258 C14orf177Q52M58 125 aa7.24□□□□□ -1.25
SEMA4D-216ENST00000474258 C1orf43Q9BWL3 253 aa7.24□□□□□ -1.25
SEMA4D-216ENST00000474258 CRPP02741 224 aa7.23□□□□□ -1.25
SEMA4D-216ENST00000474258 ANGP03950 147 aaKnown RBP7.23□□□□□ -1.25
SEMA4D-216ENST00000474258 COTL1Q14019 142 aa7.23□□□□□ -1.25
SEMA4D-216ENST00000474258 TMEM97Q5BJF2 176 aa7.23□□□□□ -1.25
SEMA4D-216ENST00000474258 ENHOQ6UWT2 76 aa7.23□□□□□ -1.25
SEMA4D-216ENST00000474258 C2orf66Q6UXQ4 117 aa7.23□□□□□ -1.25
SEMA4D-216ENST00000474258 LINC00173Q6ZV60 143 aa7.23□□□□□ -1.25
SEMA4D-216ENST00000474258 SCXQ7RTU7 201 aa7.23□□□□□ -1.25
SEMA4D-216ENST00000474258 C20orf203Q8NBC4 194 aa7.23□□□□□ -1.25
SEMA4D-216ENST00000474258 DEFB104AQ8WTQ1 72 aa7.23□□□□□ -1.25
SEMA4D-216ENST00000474258 IGIPA6NJ69 53 aa7.22□□□□□ -1.25
SEMA4D-216ENST00000474258 ATP5LO75964 103 aa7.22□□□□□ -1.25
SEMA4D-216ENST00000474258 C3orf79P0CE67 100 aa7.22□□□□□ -1.25
SEMA4D-216ENST00000474258 MPV17L2Q567V2 206 aa7.22□□□□□ -1.25
SEMA4D-216ENST00000474258 NTM-AS1Q6ZSK4 140 aa7.22□□□□□ -1.25
SEMA4D-216ENST00000474258 CHCHD5Q9BSY4 110 aa7.22□□□□□ -1.25
SEMA4D-216ENST00000474258 CHAC1Q9BUX1 264 aa7.22□□□□□ -1.25
SEMA4D-216ENST00000474258 CYSLTR1Q9Y271 337 aa7.22□□□□□ -1.25
SEMA4D-216ENST00000474258 MYCBP2O75592 4640 aa7.22□□□□□ -1.25
SEMA4D-216ENST00000474258 SYS1-DBNDD2H3BUS1 97 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms