RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 ST20Q9HBF5 79 aa8.5□□□□□ -1.05
CHD3-209ENST00000473376 IGKV3OR2-268A0A0C4DH90 116 aa8.49□□□□□ -1.05
CHD3-209ENST00000473376 SS18Q15532 418 aa8.49□□□□□ -1.05
CHD3-209ENST00000473376 HIGD2BQ4VC39 106 aa8.49□□□□□ -1.05
CHD3-209ENST00000473376 SPINK6Q6UWN8 80 aa8.49□□□□□ -1.05
CHD3-209ENST00000473376 TSKUQ8WUA8 353 aa8.49□□□□□ -1.05
CHD3-209ENST00000473376 CDC42SE2Q9NRR3 84 aa8.49□□□□□ -1.05
CHD3-209ENST00000473376 A0A1B0GUT8 65 aa8.48□□□□□ -1.05
CHD3-209ENST00000473376 TSHBP01222 138 aa8.48□□□□□ -1.05
CHD3-209ENST00000473376 A0A096LNI7 61 aa8.47□□□□□ -1.05
CHD3-209ENST00000473376 IGKV2-24A0A0C4DH68 120 aa8.47□□□□□ -1.05
CHD3-209ENST00000473376 XCL1P47992 114 aa8.47□□□□□ -1.05
CHD3-209ENST00000473376 ZNF664Q8N3J9 261 aa8.47□□□□□ -1.05
CHD3-209ENST00000473376 ISOC2Q96AB3 205 aa8.47□□□□□ -1.05
CHD3-209ENST00000473376 CARD19Q96LW7 228 aa8.47□□□□□ -1.05
CHD3-209ENST00000473376 C7orf77A4D0Y5 90 aa8.46□□□□□ -1.06
CHD3-209ENST00000473376 HIGD1CA8MV81 97 aa8.46□□□□□ -1.06
CHD3-209ENST00000473376 C1orf196B1AJZ1 125 aa8.46□□□□□ -1.06
CHD3-209ENST00000473376 ZNF561-AS1K7EIQ3 104 aa8.46□□□□□ -1.06
CHD3-209ENST00000473376 VCYO14598 125 aa8.46□□□□□ -1.06
CHD3-209ENST00000473376 RAB4AP20338 218 aa8.46□□□□□ -1.06
CHD3-209ENST00000473376 REG3GQ6UW15 175 aa8.46□□□□□ -1.06
CHD3-209ENST00000473376 Q6ZRP5 223 aa8.46□□□□□ -1.06
CHD3-209ENST00000473376 LINC01551Q86U37 167 aa8.46□□□□□ -1.06
CHD3-209ENST00000473376 OSTCQ9NRP0 149 aa8.46□□□□□ -1.06
CHD3-209ENST00000473376 UBR4Q5T4S7 5183 aa8.46□□□□□ -1.06
CHD3-209ENST00000473376 A0A0J9YXV3 536 aa8.45□□□□□ -1.06
CHD3-209ENST00000473376 SYCNQ0VAF6 134 aa8.45□□□□□ -1.06
CHD3-209ENST00000473376 SRSF9Q13242 221 aaKnown RBP eCLIP8.45□□□□□ -1.06
CHD3-209ENST00000473376 SMIM7Q9BQ49 75 aa8.44□□□□□ -1.06
CHD3-209ENST00000473376 TMEM242Q9NWH2 141 aa8.44□□□□□ -1.06
CHD3-209ENST00000473376 PPP1R2P9O14990 202 aa8.43□□□□□ -1.06
CHD3-209ENST00000473376 TCAPO15273 167 aa8.43□□□□□ -1.06
CHD3-209ENST00000473376 CAMPP49913 170 aa8.43□□□□□ -1.06
CHD3-209ENST00000473376 PTTG1IPP53801 180 aa8.43□□□□□ -1.06
CHD3-209ENST00000473376 KRTAP10-8P60410 259 aa8.43□□□□□ -1.06
CHD3-209ENST00000473376 RIGQ13278 110 aa8.43□□□□□ -1.06
CHD3-209ENST00000473376 C2orf48Q96LS8 159 aa8.43□□□□□ -1.06
CHD3-209ENST00000473376 KIR2DL4Q99706 377 aa8.43□□□□□ -1.06
CHD3-209ENST00000473376 TIMM21Q9BVV7 248 aa8.43□□□□□ -1.06
CHD3-209ENST00000473376 IGLV4-69A0A075B6H9 119 aa8.42□□□□□ -1.06
CHD3-209ENST00000473376 LOC107984640A0A0U1RRK4 108 aa8.42□□□□□ -1.06
CHD3-209ENST00000473376 F8WDY8 70 aa8.42□□□□□ -1.06
CHD3-209ENST00000473376 GAS8-AS1O95177 125 aa8.42□□□□□ -1.06
CHD3-209ENST00000473376 SUMO2P61956 95 aaKnown RBP8.42□□□□□ -1.06
CHD3-209ENST00000473376 RPL32P62910 135 aaKnown RBP8.42□□□□□ -1.06
CHD3-209ENST00000473376 RNF151Q2KHN1 245 aa8.42□□□□□ -1.06
CHD3-209ENST00000473376 ALKAL2Q6UX46 152 aa8.42□□□□□ -1.06
CHD3-209ENST00000473376 TMEM18Q96B42 140 aa8.42□□□□□ -1.06
CHD3-209ENST00000473376 LINC00862A6NCI5 91 aa8.41□□□□□ -1.06
CHD3-209ENST00000473376 ZNF727A8MUV8 499 aa8.41□□□□□ -1.06
CHD3-209ENST00000473376 COX7A2LO14548 114 aa8.41□□□□□ -1.06
CHD3-209ENST00000473376 FCER1GP30273 86 aa8.41□□□□□ -1.06
CHD3-209ENST00000473376 FAM74A3Q4VXF1 159 aa8.41□□□□□ -1.06
CHD3-209ENST00000473376 AKAP14Q86UN6 197 aa8.41□□□□□ -1.06
CHD3-209ENST00000473376 AMN1Q8IY45 258 aa8.41□□□□□ -1.06
CHD3-209ENST00000473376 EIF5A2Q9GZV4 153 aaKnown RBP8.41□□□□□ -1.06
CHD3-209ENST00000473376 UBE2D4Q9Y2X8 147 aa8.41□□□□□ -1.06
CHD3-209ENST00000473376 TRBV24-1A0A075B6N3 115 aa8.4□□□□□ -1.06
CHD3-209ENST00000473376 A0A1B0GW15 77 aa8.4□□□□□ -1.06
CHD3-209ENST00000473376 APOMO95445 188 aa8.4□□□□□ -1.06
CHD3-209ENST00000473376 MALP21145 153 aa8.4□□□□□ -1.06
CHD3-209ENST00000473376 NRACQ8N912 160 aa8.4□□□□□ -1.06
CHD3-209ENST00000473376 NUP35Q8NFH5 326 aa8.4□□□□□ -1.06
CHD3-209ENST00000473376 C20orf78Q9BR46 151 aa8.4□□□□□ -1.06
CHD3-209ENST00000473376 NAT8BQ9UHF3 227 aa8.4□□□□□ -1.06
CHD3-209ENST00000473376 V9GYV3 84 aa8.4□□□□□ -1.06
CHD3-209ENST00000473376 SRP19P09132 144 aaKnown RBP8.38□□□□□ -1.07
CHD3-209ENST00000473376 CEBPGP53567 150 aa8.38□□□□□ -1.07
CHD3-209ENST00000473376 OR10D4PQ8NGN7 298 aa8.38□□□□□ -1.07
CHD3-209ENST00000473376 TMEM241Q24JQ0 296 aa8.37□□□□□ -1.07
CHD3-209ENST00000473376 FAM104BQ5XKR9 115 aa8.37□□□□□ -1.07
CHD3-209ENST00000473376 LINC00526Q96FQ7 95 aa8.37□□□□□ -1.07
CHD3-209ENST00000473376 CAMK2N2Q96S95 79 aa8.37□□□□□ -1.07
CHD3-209ENST00000473376 SMIM27A0A1W2PRY6 76 aa8.36□□□□□ -1.07
CHD3-209ENST00000473376 SMDT1Q9H4I9 107 aa8.36□□□□□ -1.07
CHD3-209ENST00000473376 MRPL35Q9NZE8 188 aaKnown RBP8.36□□□□□ -1.07
CHD3-209ENST00000473376 TNXBP22105 4242 aa8.36□□□□□ -1.07
CHD3-209ENST00000473376 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.35□□□□□ -1.07
CHD3-209ENST00000473376 S100A8P05109 93 aa8.35□□□□□ -1.07
CHD3-209ENST00000473376 MRPS36P82909 103 aaKnown RBP8.35□□□□□ -1.07
CHD3-209ENST00000473376 GAGE2BQ13066 116 aa8.35□□□□□ -1.07
CHD3-209ENST00000473376 SPANXA1Q9NS26 97 aa8.35□□□□□ -1.07
CHD3-209ENST00000473376 TRAV13-1A0A0B4J241 112 aa8.34□□□□□ -1.07
CHD3-209ENST00000473376 PPBPP02775 128 aa8.34□□□□□ -1.07
CHD3-209ENST00000473376 MRPL51Q4U2R6 128 aaKnown RBP8.34□□□□□ -1.07
CHD3-209ENST00000473376 IMMP2LQ96T52 175 aa8.34□□□□□ -1.07
CHD3-209ENST00000473376 IGHV3OR16-9A0A0B4J2B5 98 aa8.33□□□□□ -1.08
CHD3-209ENST00000473376 A0A1W2PNN7 141 aa8.33□□□□□ -1.08
CHD3-209ENST00000473376 TLX1NBP0CAT3 122 aa8.33□□□□□ -1.08
CHD3-209ENST00000473376 RPL23P62829 140 aaKnown RBP8.33□□□□□ -1.08
CHD3-209ENST00000473376 C9orf116Q5BN46 136 aaPredicted RBP8.33□□□□□ -1.08
CHD3-209ENST00000473376 NAT8Q9UHE5 227 aa8.33□□□□□ -1.08
CHD3-209ENST00000473376 F8W036 122 aa8.32□□□□□ -1.08
CHD3-209ENST00000473376 SMKR1H3BMG3 65 aa8.32□□□□□ -1.08
CHD3-209ENST00000473376 CKS2P33552 79 aa8.32□□□□□ -1.08
CHD3-209ENST00000473376 SPAG11BQ08648 103 aa8.32□□□□□ -1.08
CHD3-209ENST00000473376 Q6ZUT4 128 aa8.32□□□□□ -1.08
CHD3-209ENST00000473376 TNFRSF6BO95407 300 aa8.31□□□□□ -1.08
CHD3-209ENST00000473376 C5orf38Q86SI9 138 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms