RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 SRSF9Q13242 221 aaKnown RBP eCLIP6.23□□□□□ -1.41
SCAMP3-205ENST00000472397 COMMD7Q86VX2 200 aa6.23□□□□□ -1.41
SCAMP3-205ENST00000472397 NUDT10Q8NFP7 164 aa6.23□□□□□ -1.41
SCAMP3-205ENST00000472397 C11orf52Q96A22 123 aa6.23□□□□□ -1.41
SCAMP3-205ENST00000472397 NUDT11Q96G61 164 aa6.23□□□□□ -1.41
SCAMP3-205ENST00000472397 CARD19Q96LW7 228 aa6.23□□□□□ -1.41
SCAMP3-205ENST00000472397 C9JQL5 133 aa6.22□□□□□ -1.41
SCAMP3-205ENST00000472397 APCSP02743 223 aa6.22□□□□□ -1.41
SCAMP3-205ENST00000472397 RNASE7Q9H1E1 156 aaKnown RBP6.22□□□□□ -1.41
SCAMP3-205ENST00000472397 TRBV20OR9-2A0A075B6H5 130 aa6.21□□□□□ -1.42
SCAMP3-205ENST00000472397 LINC00959A0A1B0GUT2 108 aa6.21□□□□□ -1.42
SCAMP3-205ENST00000472397 ZNF727A8MUV8 499 aa6.21□□□□□ -1.42
SCAMP3-205ENST00000472397 PMCHP20382 165 aa6.21□□□□□ -1.42
SCAMP3-205ENST00000472397 SYCNQ0VAF6 134 aa6.21□□□□□ -1.42
SCAMP3-205ENST00000472397 RNASE13Q5GAN3 156 aaKnown RBP6.21□□□□□ -1.42
SCAMP3-205ENST00000472397 Q6ZRP5 223 aa6.21□□□□□ -1.42
SCAMP3-205ENST00000472397 PHF5AQ7RTV0 110 aaKnown RBP6.21□□□□□ -1.42
SCAMP3-205ENST00000472397 SMIM7Q9BQ49 75 aa6.21□□□□□ -1.42
SCAMP3-205ENST00000472397 TMEM242Q9NWH2 141 aa6.21□□□□□ -1.42
SCAMP3-205ENST00000472397 IGLV4-69A0A075B6H9 119 aa6.2□□□□□ -1.42
SCAMP3-205ENST00000472397 IGHV1-58A0A0C4DH39 117 aa6.2□□□□□ -1.42
SCAMP3-205ENST00000472397 FAM231BA6NCW3 169 aa6.2□□□□□ -1.42
SCAMP3-205ENST00000472397 F2Z2F3 143 aa6.2□□□□□ -1.42
SCAMP3-205ENST00000472397 TMEM250H0YL14 139 aa6.2□□□□□ -1.42
SCAMP3-205ENST00000472397 PRR26Q8N8Z3 221 aa6.2□□□□□ -1.42
SCAMP3-205ENST00000472397 OR5A1Q8NGJ0 315 aa6.2□□□□□ -1.42
SCAMP3-205ENST00000472397 OPRPNQ99935 248 aaPredicted RBP6.2□□□□□ -1.42
SCAMP3-205ENST00000472397 XKRY2A2RUG3 117 aa6.19□□□□□ -1.42
SCAMP3-205ENST00000472397 SDHAF1A6NFY7 115 aa6.19□□□□□ -1.42
SCAMP3-205ENST00000472397 ZNF561-AS1K7EIQ3 104 aa6.19□□□□□ -1.42
SCAMP3-205ENST00000472397 K7EN84 100 aa6.19□□□□□ -1.42
SCAMP3-205ENST00000472397 CTRLP40313 264 aa6.19□□□□□ -1.42
SCAMP3-205ENST00000472397 PTTG1IPP53801 180 aa6.19□□□□□ -1.42
SCAMP3-205ENST00000472397 C1orf137Q5JT78 98 aa6.19□□□□□ -1.42
SCAMP3-205ENST00000472397 TMEM101Q96IK0 257 aa6.19□□□□□ -1.42
SCAMP3-205ENST00000472397 BTF3L4Q96K17 158 aa6.19□□□□□ -1.42
SCAMP3-205ENST00000472397 PSORS1C2Q9UIG4 136 aa6.19□□□□□ -1.42
SCAMP3-205ENST00000472397 LINC00862A6NCI5 91 aa6.18□□□□□ -1.42
SCAMP3-205ENST00000472397 TSHBP01222 138 aa6.18□□□□□ -1.42
SCAMP3-205ENST00000472397 MT-ND6P03923 174 aa6.18□□□□□ -1.42
SCAMP3-205ENST00000472397 CAMPP49913 170 aa6.18□□□□□ -1.42
SCAMP3-205ENST00000472397 RPL18AQ02543 176 aaKnown RBP6.18□□□□□ -1.42
SCAMP3-205ENST00000472397 SS18Q15532 418 aa6.18□□□□□ -1.42
SCAMP3-205ENST00000472397 ADIRFQ15847 76 aa6.18□□□□□ -1.42
SCAMP3-205ENST00000472397 C9orf116Q5BN46 136 aaPredicted RBP6.18□□□□□ -1.42
SCAMP3-205ENST00000472397 OCC1Q8TAD7 63 aa6.18□□□□□ -1.42
SCAMP3-205ENST00000472397 RPP21Q9H633 154 aaKnown RBP6.18□□□□□ -1.42
SCAMP3-205ENST00000472397 F8W036 122 aa6.17□□□□□ -1.42
SCAMP3-205ENST00000472397 SMKR1H3BMG3 65 aa6.17□□□□□ -1.42
SCAMP3-205ENST00000472397 I3L3M4 83 aa6.17□□□□□ -1.42
SCAMP3-205ENST00000472397 TMEM241Q24JQ0 296 aa6.17□□□□□ -1.42
SCAMP3-205ENST00000472397 C5orf38Q86SI9 138 aa6.17□□□□□ -1.42
SCAMP3-205ENST00000472397 KRTAP11-1Q8IUC1 163 aa6.17□□□□□ -1.42
SCAMP3-205ENST00000472397 LOC107984640A0A0U1RRK4 108 aa6.16□□□□□ -1.42
SCAMP3-205ENST00000472397 FAM168BA1KXE4 195 aa6.16□□□□□ -1.42
SCAMP3-205ENST00000472397 NCR2O95944 276 aa6.16□□□□□ -1.42
SCAMP3-205ENST00000472397 MALP21145 153 aa6.16□□□□□ -1.42
SCAMP3-205ENST00000472397 ANKRD39Q53RE8 183 aa6.16□□□□□ -1.42
SCAMP3-205ENST00000472397 UQCC3Q6UW78 93 aa6.16□□□□□ -1.42
SCAMP3-205ENST00000472397 SMIM15Q7Z3B0 74 aa6.16□□□□□ -1.42
SCAMP3-205ENST00000472397 SLC7A5P1Q8MH63 180 aa6.16□□□□□ -1.42
SCAMP3-205ENST00000472397 CAMK2N2Q96S95 79 aa6.16□□□□□ -1.42
SCAMP3-205ENST00000472397 SMDT1Q9H4I9 107 aa6.16□□□□□ -1.42
SCAMP3-205ENST00000472397 BIN3Q9NQY0 253 aa6.16□□□□□ -1.42
SCAMP3-205ENST00000472397 LINC00474Q9P2X8 69 aa6.16□□□□□ -1.42
SCAMP3-205ENST00000472397 NAT8Q9UHE5 227 aa6.16□□□□□ -1.42
SCAMP3-205ENST00000472397 TRAV13-1A0A0B4J241 112 aa6.15□□□□□ -1.42
SCAMP3-205ENST00000472397 TMEM218A2RU14 115 aa6.15□□□□□ -1.42
SCAMP3-205ENST00000472397 GATCO43716 136 aaKnown RBP6.15□□□□□ -1.42
SCAMP3-205ENST00000472397 ESDP10768 282 aa6.15□□□□□ -1.42
SCAMP3-205ENST00000472397 RPL23P62829 140 aaKnown RBP6.15□□□□□ -1.42
SCAMP3-205ENST00000472397 FAM74A3Q4VXF1 159 aa6.15□□□□□ -1.42
SCAMP3-205ENST00000472397 ZNF664Q8N3J9 261 aa6.15□□□□□ -1.42
SCAMP3-205ENST00000472397 ST20Q9HBF5 79 aa6.15□□□□□ -1.42
SCAMP3-205ENST00000472397 CDC42SE2Q9NRR3 84 aa6.15□□□□□ -1.42
SCAMP3-205ENST00000472397 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.14□□□□□ -1.43
SCAMP3-205ENST00000472397 PRR4Q16378 134 aa6.14□□□□□ -1.43
SCAMP3-205ENST00000472397 CD164L2Q6UWJ8 174 aa6.14□□□□□ -1.43
SCAMP3-205ENST00000472397 LINC01551Q86U37 167 aa6.14□□□□□ -1.43
SCAMP3-205ENST00000472397 NUP35Q8NFH5 326 aa6.14□□□□□ -1.43
SCAMP3-205ENST00000472397 SMIM12Q96EX1 92 aa6.14□□□□□ -1.43
SCAMP3-205ENST00000472397 MRAP2Q96G30 205 aa6.14□□□□□ -1.43
SCAMP3-205ENST00000472397 A0A087WZ39 114 aa6.13□□□□□ -1.43
SCAMP3-205ENST00000472397 H7C423 109 aa6.13□□□□□ -1.43
SCAMP3-205ENST00000472397 COX7A2LO14548 114 aa6.13□□□□□ -1.43
SCAMP3-205ENST00000472397 ZNF25P17030 456 aaPredicted RBP6.13□□□□□ -1.43
SCAMP3-205ENST00000472397 FAM19A5Q7Z5A7 132 aaPredicted RBP6.13□□□□□ -1.43
SCAMP3-205ENST00000472397 ISOC2Q96AB3 205 aa6.13□□□□□ -1.43
SCAMP3-205ENST00000472397 APOMO95445 188 aa6.12□□□□□ -1.43
SCAMP3-205ENST00000472397 IGLV7-43P04211 117 aa6.12□□□□□ -1.43
SCAMP3-205ENST00000472397 ADCYAP1P18509 176 aa6.12□□□□□ -1.43
SCAMP3-205ENST00000472397 SPAG11BQ08648 103 aa6.12□□□□□ -1.43
SCAMP3-205ENST00000472397 Q6ZUT4 128 aa6.12□□□□□ -1.43
SCAMP3-205ENST00000472397 AMN1Q8IY45 258 aa6.12□□□□□ -1.43
SCAMP3-205ENST00000472397 CNFNQ9BYD5 112 aa6.12□□□□□ -1.43
SCAMP3-205ENST00000472397 C7orf77A4D0Y5 90 aa6.11□□□□□ -1.43
SCAMP3-205ENST00000472397 FCER1GP30273 86 aa6.11□□□□□ -1.43
SCAMP3-205ENST00000472397 GAGE2EQ4V326 116 aa6.11□□□□□ -1.43
SCAMP3-205ENST00000472397 C10orf25Q5T742 122 aa6.11□□□□□ -1.43
SCAMP3-205ENST00000472397 SEC11CQ9BY50 192 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms