RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 H2AFB1P0C5Y9 115 aa11.9□□□□□ -0.5
CCDC78-208ENST00000471861 ISOC2Q96AB3 205 aa11.9□□□□□ -0.5
CCDC78-208ENST00000471861 BTF3L4Q96K17 158 aa11.9□□□□□ -0.5
CCDC78-208ENST00000471861 GNG4P50150 75 aa11.89□□□□□ -0.51
CCDC78-208ENST00000471861 SS18Q15532 418 aa11.89□□□□□ -0.51
CCDC78-208ENST00000471861 SMIM12Q96EX1 92 aa11.89□□□□□ -0.51
CCDC78-208ENST00000471861 TMEM101Q96IK0 257 aa11.89□□□□□ -0.51
CCDC78-208ENST00000471861 CDC42SE2Q9NRR3 84 aa11.89□□□□□ -0.51
CCDC78-208ENST00000471861 GNG13Q9P2W3 67 aa11.89□□□□□ -0.51
CCDC78-208ENST00000471861 IGLV1-50A0A075B6I6 118 aa11.88□□□□□ -0.51
CCDC78-208ENST00000471861 TSHBP01222 138 aa11.88□□□□□ -0.51
CCDC78-208ENST00000471861 RPL18AQ02543 176 aaKnown RBP11.88□□□□□ -0.51
CCDC78-208ENST00000471861 EIF5AP63241 154 aaKnown RBP11.87□□□□□ -0.51
CCDC78-208ENST00000471861 EIF5AL1Q6IS14 154 aaKnown RBP11.87□□□□□ -0.51
CCDC78-208ENST00000471861 NUDT10Q8NFP7 164 aa11.87□□□□□ -0.51
CCDC78-208ENST00000471861 NUDT11Q96G61 164 aa11.87□□□□□ -0.51
CCDC78-208ENST00000471861 CAMK2N2Q96S95 79 aa11.87□□□□□ -0.51
CCDC78-208ENST00000471861 MANBALQ9NQG1 85 aa11.87□□□□□ -0.51
CCDC78-208ENST00000471861 SMLR1H3BR10 107 aa11.86□□□□□ -0.51
CCDC78-208ENST00000471861 I3L3M4 83 aa11.86□□□□□ -0.51
CCDC78-208ENST00000471861 MRPL52Q86TS9 123 aaKnown RBP11.86□□□□□ -0.51
CCDC78-208ENST00000471861 OPRPNQ99935 248 aaPredicted RBP11.86□□□□□ -0.51
CCDC78-208ENST00000471861 TMEM242Q9NWH2 141 aa11.86□□□□□ -0.51
CCDC78-208ENST00000471861 TRBV6-5A0A0K0K1A5 114 aa11.85□□□□□ -0.51
CCDC78-208ENST00000471861 BCL2L11O43521 198 aa11.85□□□□□ -0.51
CCDC78-208ENST00000471861 PMCHP20382 165 aa11.85□□□□□ -0.51
CCDC78-208ENST00000471861 MRAP2Q96G30 205 aa11.84□□□□□ -0.51
CCDC78-208ENST00000471861 C2orf48Q96LS8 159 aa11.84□□□□□ -0.51
CCDC78-208ENST00000471861 RNASE7Q9H1E1 156 aaKnown RBP11.84□□□□□ -0.51
CCDC78-208ENST00000471861 FAM168BA1KXE4 195 aa11.83□□□□□ -0.52
CCDC78-208ENST00000471861 COX7A2LO14548 114 aa11.83□□□□□ -0.52
CCDC78-208ENST00000471861 MALP21145 153 aa11.83□□□□□ -0.52
CCDC78-208ENST00000471861 ZNF345Q14585 488 aa11.83□□□□□ -0.52
CCDC78-208ENST00000471861 A0A087WZ39 114 aa11.82□□□□□ -0.52
CCDC78-208ENST00000471861 RPP21Q9H633 154 aaKnown RBP11.82□□□□□ -0.52
CCDC78-208ENST00000471861 TEX261Q6UWH6 196 aa11.81□□□□□ -0.52
CCDC78-208ENST00000471861 K7EN84 100 aa11.8□□□□□ -0.52
CCDC78-208ENST00000471861 RNASE13Q5GAN3 156 aaKnown RBP11.8□□□□□ -0.52
CCDC78-208ENST00000471861 BIN3Q9NQY0 253 aa11.8□□□□□ -0.52
CCDC78-208ENST00000471861 TRAV1-1A0A0B4J248 108 aa11.79□□□□□ -0.52
CCDC78-208ENST00000471861 C1orf196B1AJZ1 125 aa11.79□□□□□ -0.52
CCDC78-208ENST00000471861 SPAG11BQ08648 103 aa11.79□□□□□ -0.52
CCDC78-208ENST00000471861 C5orf38Q86SI9 138 aa11.79□□□□□ -0.52
CCDC78-208ENST00000471861 KRTAP7-1Q8IUC3 87 aa11.79□□□□□ -0.52
CCDC78-208ENST00000471861 C7orf77A4D0Y5 90 aa11.78□□□□□ -0.52
CCDC78-208ENST00000471861 UBE2D1P51668 147 aa11.78□□□□□ -0.52
CCDC78-208ENST00000471861 POLR2KP53803 58 aaKnown RBP11.78□□□□□ -0.52
CCDC78-208ENST00000471861 RNF151Q2KHN1 245 aa11.78□□□□□ -0.52
CCDC78-208ENST00000471861 SMIM15Q7Z3B0 74 aa11.78□□□□□ -0.52
CCDC78-208ENST00000471861 MED9Q9NWA0 146 aa11.78□□□□□ -0.52
CCDC78-208ENST00000471861 PDE6DO43924 150 aa11.77□□□□□ -0.53
CCDC78-208ENST00000471861 ST20Q9HBF5 79 aa11.77□□□□□ -0.53
CCDC78-208ENST00000471861 MUC17Q685J3 4493 aa11.77□□□□□ -0.53
CCDC78-208ENST00000471861 FAM19A5Q7Z5A7 132 aaPredicted RBP11.76□□□□□ -0.53
CCDC78-208ENST00000471861 TRAV13-1A0A0B4J241 112 aa11.75□□□□□ -0.53
CCDC78-208ENST00000471861 TRBV27A0A0K0K1C4 114 aa11.75□□□□□ -0.53
CCDC78-208ENST00000471861 RPL13AP40429 203 aaKnown RBP11.75□□□□□ -0.53
CCDC78-208ENST00000471861 TSKUQ8WUA8 353 aa11.75□□□□□ -0.53
CCDC78-208ENST00000471861 MRPL35Q9NZE8 188 aaKnown RBP11.75□□□□□ -0.53
CCDC78-208ENST00000471861 UBE2D4Q9Y2X8 147 aa11.75□□□□□ -0.53
CCDC78-208ENST00000471861 C10orf25Q5T742 122 aa11.74□□□□□ -0.53
CCDC78-208ENST00000471861 Q6ZUT4 128 aa11.74□□□□□ -0.53
CCDC78-208ENST00000471861 KANTRA0A1W2PQU2 76 aa11.73□□□□□ -0.53
CCDC78-208ENST00000471861 OCC1Q8TAD7 63 aa11.73□□□□□ -0.53
CCDC78-208ENST00000471861 FAM210AQ96ND0 272 aa11.73□□□□□ -0.53
CCDC78-208ENST00000471861 CSDC2Q9Y534 153 aaKnown RBP11.73□□□□□ -0.53
CCDC78-208ENST00000471861 RGS21Q2M5E4 152 aa11.72□□□□□ -0.53
CCDC78-208ENST00000471861 OR10D4PQ8NGN7 298 aa11.72□□□□□ -0.53
CCDC78-208ENST00000471861 HMSDA8MTL9 139 aa11.71□□□□□ -0.53
CCDC78-208ENST00000471861 TSPAN13O95857 204 aa11.71□□□□□ -0.53
CCDC78-208ENST00000471861 TLX1NBP0CAT3 122 aa11.71□□□□□ -0.53
CCDC78-208ENST00000471861 IMMP2LQ96T52 175 aa11.7□□□□□ -0.54
CCDC78-208ENST00000471861 C6orf48Q9UBA6 75 aa11.7□□□□□ -0.54
CCDC78-208ENST00000471861 CARHSP1Q9Y2V2 147 aaKnown RBP11.7□□□□□ -0.54
CCDC78-208ENST00000471861 M0QXV9 152 aa11.69□□□□□ -0.54
CCDC78-208ENST00000471861 ORAOV1Q8WV07 137 aa11.69□□□□□ -0.54
CCDC78-208ENST00000471861 GAGE2EQ4V326 116 aa11.68□□□□□ -0.54
CCDC78-208ENST00000471861 UNQ6190/PRO20217Q6UXQ8 127 aa11.68□□□□□ -0.54
CCDC78-208ENST00000471861 SMDT1Q9H4I9 107 aa11.68□□□□□ -0.54
CCDC78-208ENST00000471861 GAGE2DQ9UEU5 116 aa11.68□□□□□ -0.54
CCDC78-208ENST00000471861 SMKR1H3BMG3 65 aa11.67□□□□□ -0.54
CCDC78-208ENST00000471861 RAB4AP20338 218 aa11.67□□□□□ -0.54
CCDC78-208ENST00000471861 UBE2BP63146 152 aa11.67□□□□□ -0.54
CCDC78-208ENST00000471861 FAM104AQ969W3 186 aa11.67□□□□□ -0.54
CCDC78-208ENST00000471861 NDUFA1O15239 70 aa11.66□□□□□ -0.54
CCDC78-208ENST00000471861 GATCO43716 136 aaKnown RBP11.66□□□□□ -0.54
CCDC78-208ENST00000471861 FCER1GP30273 86 aa11.66□□□□□ -0.54
CCDC78-208ENST00000471861 AMN1Q8IY45 258 aa11.66□□□□□ -0.54
CCDC78-208ENST00000471861 TMEM191AQ9H0A3 160 aa11.66□□□□□ -0.54
CCDC78-208ENST00000471861 IGHV3OR16-9A0A0B4J2B5 98 aa11.65□□□□□ -0.54
CCDC78-208ENST00000471861 F8WDY8 70 aa11.65□□□□□ -0.54
CCDC78-208ENST00000471861 TEX46H3BTG2 121 aa11.65□□□□□ -0.54
CCDC78-208ENST00000471861 A0A087X002 238 aa11.64□□□□□ -0.55
CCDC78-208ENST00000471861 A8MWL6 223 aa11.64□□□□□ -0.55
CCDC78-208ENST00000471861 VCYO14598 125 aa11.64□□□□□ -0.55
CCDC78-208ENST00000471861 FAM231DQ6ZW35 169 aa11.64□□□□□ -0.55
CCDC78-208ENST00000471861 NRACQ8N912 160 aa11.64□□□□□ -0.55
CCDC78-208ENST00000471861 C9orf129Q5T035 196 aaKnown RBP11.63□□□□□ -0.55
CCDC78-208ENST00000471861 TIMM21Q9BVV7 248 aa11.63□□□□□ -0.55
CCDC78-208ENST00000471861 ZNF861PO60384 105 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms