RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 RNASE13Q5GAN3 156 aaKnown RBP5.06□□□□□ -1.6
USP48-207ENST00000471752 EIF5AL1Q6IS14 154 aaKnown RBP5.06□□□□□ -1.6
USP48-207ENST00000471752 PLAC8Q9NZF1 115 aa5.06□□□□□ -1.6
USP48-207ENST00000471752 PLA2G2DQ9UNK4 145 aa5.06□□□□□ -1.6
USP48-207ENST00000471752 LINC00959A0A1B0GUT2 108 aa5.05□□□□□ -1.6
USP48-207ENST00000471752 CCL25O15444 150 aa5.05□□□□□ -1.6
USP48-207ENST00000471752 SRP19P09132 144 aaKnown RBP5.05□□□□□ -1.6
USP48-207ENST00000471752 RAB4AP20338 218 aa5.05□□□□□ -1.6
USP48-207ENST00000471752 PMCHP20382 165 aa5.05□□□□□ -1.6
USP48-207ENST00000471752 SERTAD4-AS1Q5TG53 156 aa5.05□□□□□ -1.6
USP48-207ENST00000471752 AMMECR1LQ6DCA0 310 aa5.05□□□□□ -1.6
USP48-207ENST00000471752 FAM231DQ6ZW35 169 aa5.05□□□□□ -1.6
USP48-207ENST00000471752 LINC01551Q86U37 167 aa5.05□□□□□ -1.6
USP48-207ENST00000471752 AMN1Q8IY45 258 aa5.05□□□□□ -1.6
USP48-207ENST00000471752 FAM104AQ969W3 186 aa5.05□□□□□ -1.6
USP48-207ENST00000471752 GVQW2A0A096LPI5 108 aaPredicted RBP5.04□□□□□ -1.6
USP48-207ENST00000471752 TRBV6-5A0A0K0K1A5 114 aa5.04□□□□□ -1.6
USP48-207ENST00000471752 HIGD1CA8MV81 97 aa5.04□□□□□ -1.6
USP48-207ENST00000471752 TMEM250H0YL14 139 aa5.04□□□□□ -1.6
USP48-207ENST00000471752 I3L3M4 83 aa5.04□□□□□ -1.6
USP48-207ENST00000471752 APCSP02743 223 aa5.04□□□□□ -1.6
USP48-207ENST00000471752 STPG4Q8N801 248 aa5.04□□□□□ -1.6
USP48-207ENST00000471752 BIN3Q9NQY0 253 aa5.04□□□□□ -1.6
USP48-207ENST00000471752 CDC42SE2Q9NRR3 84 aa5.04□□□□□ -1.6
USP48-207ENST00000471752 AP5S1Q9NUS5 200 aa5.04□□□□□ -1.6
USP48-207ENST00000471752 A8MWL6 223 aa5.03□□□□□ -1.6
USP48-207ENST00000471752 BLOC1S1P78537 153 aa5.03□□□□□ -1.6
USP48-207ENST00000471752 AKAP14Q86UN6 197 aa5.03□□□□□ -1.6
USP48-207ENST00000471752 NRACQ8N912 160 aa5.03□□□□□ -1.6
USP48-207ENST00000471752 NUP35Q8NFH5 326 aa5.03□□□□□ -1.6
USP48-207ENST00000471752 TSKUQ8WUA8 353 aa5.03□□□□□ -1.6
USP48-207ENST00000471752 OPRPNQ99935 248 aaPredicted RBP5.03□□□□□ -1.6
USP48-207ENST00000471752 SMIM7Q9BQ49 75 aa5.03□□□□□ -1.6
USP48-207ENST00000471752 V9GYV3 84 aa5.03□□□□□ -1.6
USP48-207ENST00000471752 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.02□□□□□ -1.61
USP48-207ENST00000471752 A0A0J9YXV3 536 aa5.02□□□□□ -1.61
USP48-207ENST00000471752 A0A1B0GUT8 65 aa5.02□□□□□ -1.61
USP48-207ENST00000471752 A0A1W2PNN7 141 aa5.02□□□□□ -1.61
USP48-207ENST00000471752 NDUFS6O75380 124 aaKnown RBP5.02□□□□□ -1.61
USP48-207ENST00000471752 Q6ZRU5 148 aa5.02□□□□□ -1.61
USP48-207ENST00000471752 OR5A1Q8NGJ0 315 aa5.02□□□□□ -1.61
USP48-207ENST00000471752 FAM210AQ96ND0 272 aa5.02□□□□□ -1.61
USP48-207ENST00000471752 EIF5A2Q9GZV4 153 aaKnown RBP5.02□□□□□ -1.61
USP48-207ENST00000471752 TMEM191AQ9H0A3 160 aa5.02□□□□□ -1.61
USP48-207ENST00000471752 ST20Q9HBF5 79 aa5.02□□□□□ -1.61
USP48-207ENST00000471752 TRBV27A0A0K0K1C4 114 aa5.01□□□□□ -1.61
USP48-207ENST00000471752 ZNF727A8MUV8 499 aa5.01□□□□□ -1.61
USP48-207ENST00000471752 RPL23P62829 140 aaKnown RBP5.01□□□□□ -1.61
USP48-207ENST00000471752 PRR3P79522 188 aaKnown RBP5.01□□□□□ -1.61
USP48-207ENST00000471752 MRPL51Q4U2R6 128 aaKnown RBP5.01□□□□□ -1.61
USP48-207ENST00000471752 CFAP161Q6P656 301 aa5.01□□□□□ -1.61
USP48-207ENST00000471752 ZNF664Q8N3J9 261 aa5.01□□□□□ -1.61
USP48-207ENST00000471752 OSTCQ9NRP0 149 aa5.01□□□□□ -1.61
USP48-207ENST00000471752 IGLV4-69A0A075B6H9 119 aa5□□□□□ -1.61
USP48-207ENST00000471752 H7C423 109 aa5□□□□□ -1.61
USP48-207ENST00000471752 TAGLN2P37802 199 aaKnown RBP5□□□□□ -1.61
USP48-207ENST00000471752 KRTAP10-8P60410 259 aa5□□□□□ -1.61
USP48-207ENST00000471752 RPL39P62891 51 aaKnown RBP5□□□□□ -1.61
USP48-207ENST00000471752 SRSF9Q13242 221 aaKnown RBP eCLIP5□□□□□ -1.61
USP48-207ENST00000471752 CT83Q5H943 113 aa5□□□□□ -1.61
USP48-207ENST00000471752 LCE1DQ5T752 114 aa5□□□□□ -1.61
USP48-207ENST00000471752 TEX261Q6UWH6 196 aa5□□□□□ -1.61
USP48-207ENST00000471752 SMIM15Q7Z3B0 74 aa5□□□□□ -1.61
USP48-207ENST00000471752 C5orf38Q86SI9 138 aa5□□□□□ -1.61
USP48-207ENST00000471752 MRPL52Q86TS9 123 aaKnown RBP5□□□□□ -1.61
USP48-207ENST00000471752 KRTAP11-1Q8IUC1 163 aa5□□□□□ -1.61
USP48-207ENST00000471752 ISOC2Q96AB3 205 aa5□□□□□ -1.61
USP48-207ENST00000471752 TRAV13-1A0A0B4J241 112 aa4.99□□□□□ -1.61
USP48-207ENST00000471752 CAMPP49913 170 aa4.99□□□□□ -1.61
USP48-207ENST00000471752 SYCNQ0VAF6 134 aa4.99□□□□□ -1.61
USP48-207ENST00000471752 CD164L2Q6UWJ8 174 aa4.99□□□□□ -1.61
USP48-207ENST00000471752 Q6ZUT4 128 aa4.99□□□□□ -1.61
USP48-207ENST00000471752 TMEM101Q96IK0 257 aa4.99□□□□□ -1.61
USP48-207ENST00000471752 LINC01600Q96MT4 127 aa4.99□□□□□ -1.61
USP48-207ENST00000471752 UBE2D4Q9Y2X8 147 aa4.99□□□□□ -1.61
USP48-207ENST00000471752 IGHV1-58A0A0C4DH39 117 aa4.98□□□□□ -1.61
USP48-207ENST00000471752 C7orf77A4D0Y5 90 aa4.98□□□□□ -1.61
USP48-207ENST00000471752 VCYO14598 125 aa4.98□□□□□ -1.61
USP48-207ENST00000471752 ZNF25P17030 456 aaPredicted RBP4.98□□□□□ -1.61
USP48-207ENST00000471752 GAGE2BQ13066 116 aa4.98□□□□□ -1.61
USP48-207ENST00000471752 TMEM241Q24JQ0 296 aa4.98□□□□□ -1.61
USP48-207ENST00000471752 C10orf25Q5T742 122 aa4.98□□□□□ -1.61
USP48-207ENST00000471752 FAM104BQ5XKR9 115 aa4.98□□□□□ -1.61
USP48-207ENST00000471752 MRAP2Q96G30 205 aa4.98□□□□□ -1.61
USP48-207ENST00000471752 BTF3L4Q96K17 158 aa4.98□□□□□ -1.61
USP48-207ENST00000471752 CARD19Q96LW7 228 aa4.98□□□□□ -1.61
USP48-207ENST00000471752 SMIM27A0A1W2PRY6 76 aa4.97□□□□□ -1.61
USP48-207ENST00000471752 FAM168BA1KXE4 195 aa4.97□□□□□ -1.61
USP48-207ENST00000471752 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.97□□□□□ -1.61
USP48-207ENST00000471752 PTTG1IPP53801 180 aa4.97□□□□□ -1.61
USP48-207ENST00000471752 SUMO2P61956 95 aaKnown RBP4.97□□□□□ -1.61
USP48-207ENST00000471752 SS18Q15532 418 aa4.97□□□□□ -1.61
USP48-207ENST00000471752 ADIRFQ15847 76 aa4.97□□□□□ -1.61
USP48-207ENST00000471752 FAM74A3Q4VXF1 159 aa4.97□□□□□ -1.61
USP48-207ENST00000471752 ZC2HC1BQ5TFG8 222 aa4.97□□□□□ -1.61
USP48-207ENST00000471752 PHF5AQ7RTV0 110 aaKnown RBP4.97□□□□□ -1.61
USP48-207ENST00000471752 KRTAP7-1Q8IUC3 87 aa4.97□□□□□ -1.61
USP48-207ENST00000471752 C7orf33Q8WU49 177 aa4.97□□□□□ -1.61
USP48-207ENST00000471752 ZNF561-AS1K7EIQ3 104 aa4.96□□□□□ -1.62
USP48-207ENST00000471752 TCAPO15273 167 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms