RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 CRYBA4P53673 196 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 RRAS2P62070 204 aaPredicted RBP3.03□□□□□ -1.92
CKS1B-204ENST00000471245 POLR2GP62487 172 aaKnown RBP eCLIP3.03□□□□□ -1.92
CKS1B-204ENST00000471245 IFITM2Q01629 132 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 AKR1C1Q04828 323 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 SLC38A11Q08AI6 406 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 ACOT6Q3I5F7 207 aaPredicted RBP3.03□□□□□ -1.92
CKS1B-204ENST00000471245 TMEM97Q5BJF2 176 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 ATP5L2Q7Z4Y8 100 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 MED28Q9H204 178 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 CACFD1Q9UGQ2 172 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 FUT9Q9Y231 359 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 TRGV2A0A075B6R0 118 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 TRGV1A0A0A0MS02 117 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 DUXBA0A1W2PPF3 345 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 SFTA3P0C7M3 94 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 METTL15P1P0C7V9 234 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 RPL37AP61513 92 aaKnown RBP3.02□□□□□ -1.93
CKS1B-204ENST00000471245 RBX1P62877 108 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 HERVK_113P63121 156 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 MRPS10P82664 201 aaKnown RBP3.02□□□□□ -1.93
CKS1B-204ENST00000471245 PMAIP1Q13794 54 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 TMEM128Q5BJH2 165 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 LCN15Q6UWW0 184 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 TMEM14EPQ6UXP3 125 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 LINC00305Q7Z4B0 112 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 ZFAND2AQ8N6M9 145 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 FER1L6-AS1Q8NA97 138 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 AP3S1Q92572 193 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 DIRAS2Q96HU8 199 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 ODF3Q96PU9 254 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 MGST2Q99735 147 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 SEC22CQ9BRL7 303 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 AGPAT4-IT1Q9H0P7 198 aa3.02□□□□□ -1.93
CKS1B-204ENST00000471245 MRPL16Q9NX20 251 aaKnown RBP3.02□□□□□ -1.93
CKS1B-204ENST00000471245 C7orf71A4D174 169 aa3.01□□□□□ -1.93
CKS1B-204ENST00000471245 IBA57-AS1B1ANH7 110 aa3.01□□□□□ -1.93
CKS1B-204ENST00000471245 TMEM238C9JI98 176 aa3.01□□□□□ -1.93
CKS1B-204ENST00000471245 K7ERS5 55 aa3.01□□□□□ -1.93
CKS1B-204ENST00000471245 SFT2D2O95562 160 aa3.01□□□□□ -1.93
CKS1B-204ENST00000471245 SLC25A5P05141 298 aaKnown RBP3.01□□□□□ -1.93
CKS1B-204ENST00000471245 RNASE4P34096 147 aaKnown RBP3.01□□□□□ -1.93
CKS1B-204ENST00000471245 LELP1Q5T871 98 aa3.01□□□□□ -1.93
CKS1B-204ENST00000471245 C10orf126Q8N4M7 172 aa3.01□□□□□ -1.93
CKS1B-204ENST00000471245 C3orf22Q8N5N4 141 aa3.01□□□□□ -1.93
CKS1B-204ENST00000471245 EIF4E3Q8N5X7 224 aaKnown RBP3.01□□□□□ -1.93
CKS1B-204ENST00000471245 CIB3Q96Q77 187 aaPredicted RBP3.01□□□□□ -1.93
CKS1B-204ENST00000471245 SLC50A1Q9BRV3 221 aa3.01□□□□□ -1.93
CKS1B-204ENST00000471245 MRPL32Q9BYC8 188 aaKnown RBP3.01□□□□□ -1.93
CKS1B-204ENST00000471245 PSENENQ9NZ42 101 aa3.01□□□□□ -1.93
CKS1B-204ENST00000471245 PRO0255Q9UI72 69 aa3.01□□□□□ -1.93
CKS1B-204ENST00000471245 SCP2D1Q9UJQ7 156 aa3.01□□□□□ -1.93
CKS1B-204ENST00000471245 HHLA3Q9XRX5 114 aa3.01□□□□□ -1.93
CKS1B-204ENST00000471245 MUC2Q02817 5179 aa3.01□□□□□ -1.93
CKS1B-204ENST00000471245 IGKV2-40A0A087WW87 121 aaPredicted RBP3□□□□□ -1.93
CKS1B-204ENST00000471245 FNDC10F2Z333 226 aa3□□□□□ -1.93
CKS1B-204ENST00000471245 SSSCA1O60232 199 aa3□□□□□ -1.93
CKS1B-204ENST00000471245 IGKV2D-40P01614 121 aaPredicted RBP3□□□□□ -1.93
CKS1B-204ENST00000471245 OR4E1P0C645 316 aa3□□□□□ -1.93
CKS1B-204ENST00000471245 KRTAP10-8P60410 259 aa3□□□□□ -1.93
CKS1B-204ENST00000471245 MIC13Q5XKP0 118 aa3□□□□□ -1.93
CKS1B-204ENST00000471245 BPIFA4PQ86YQ2 179 aa3□□□□□ -1.93
CKS1B-204ENST00000471245 ZNF680Q8NEM1 530 aa3□□□□□ -1.93
CKS1B-204ENST00000471245 RAB2BQ8WUD1 216 aa3□□□□□ -1.93
CKS1B-204ENST00000471245 C11orf1Q9H5F2 150 aa3□□□□□ -1.93
CKS1B-204ENST00000471245 NPVFQ9HCQ7 196 aa3□□□□□ -1.93
CKS1B-204ENST00000471245 PRELID1Q9Y255 219 aa3□□□□□ -1.93
CKS1B-204ENST00000471245 PXMP4Q9Y6I8 212 aa3□□□□□ -1.93
CKS1B-204ENST00000471245 FAT4Q6V0I7 4981 aa3□□□□□ -1.93
CKS1B-204ENST00000471245 TRBV19A0A075B6N1 114 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 A0A1B0GV50 99 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 C9orf170A2RU37 121 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 A8MWP4 228 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 M0R381 172 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 LECT2O14960 151 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 APOMO95445 188 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 PYYP10082 97 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 SRIP30626 198 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 LINC01556Q5JQF7 62 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 IBA57Q5T440 356 aaKnown RBP2.99□□□□□ -1.93
CKS1B-204ENST00000471245 C10orf113Q5VZT2 155 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 EXOC3-AS1Q8N2X6 119 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 ZNF664Q8N3J9 261 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 OR10P1Q8NGE3 313 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 DNAJC30Q96LL9 226 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 CARHSP1Q9Y2V2 147 aaKnown RBP2.99□□□□□ -1.93
CKS1B-204ENST00000471245 V9GYH0 126 aa2.99□□□□□ -1.93
CKS1B-204ENST00000471245 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
CKS1B-204ENST00000471245 GPX1P07203 203 aa2.98□□□□□ -1.93
CKS1B-204ENST00000471245 PFN1P07737 140 aaKnown RBP2.98□□□□□ -1.93
CKS1B-204ENST00000471245 S100A2P29034 98 aa2.98□□□□□ -1.93
CKS1B-204ENST00000471245 S100A7P31151 101 aa2.98□□□□□ -1.93
CKS1B-204ENST00000471245 FLI1Q01543 452 aaPredicted RBP2.98□□□□□ -1.93
CKS1B-204ENST00000471245 TDRG1Q3Y452 100 aa2.98□□□□□ -1.93
CKS1B-204ENST00000471245 TMEM136Q6ZRR5 245 aa2.98□□□□□ -1.93
CKS1B-204ENST00000471245 ADM2Q7Z4H4 148 aa2.98□□□□□ -1.93
CKS1B-204ENST00000471245 C1orf64Q8NEQ6 169 aa2.98□□□□□ -1.93
CKS1B-204ENST00000471245 Q8TAT8 98 aa2.98□□□□□ -1.93
CKS1B-204ENST00000471245 FAM167A-AS1Q96KT0 104 aa2.98□□□□□ -1.93
CKS1B-204ENST00000471245 RSL24D1Q9UHA3 163 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms