RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-222	ENST00000469558	AMMECR1L	Q6DCA0	310 aa		7.56	□□□□□ -1.2
MCF2L-222	ENST00000469558	C15orf56	Q8N910	161 aa		7.56	□□□□□ -1.2
MCF2L-222	ENST00000469558	BTF3L4	Q96K17	158 aa		7.56	□□□□□ -1.2
MCF2L-222	ENST00000469558	IMMP2L	Q96T52	175 aa		7.56	□□□□□ -1.2
MCF2L-222	ENST00000469558	CDC42SE2	Q9NRR3	84 aa		7.56	□□□□□ -1.2
MCF2L-222	ENST00000469558	CARHSP1	Q9Y2V2	147 aa	Known RBP	7.56	□□□□□ -1.2
MCF2L-222	ENST00000469558	UBE2D4	Q9Y2X8	147 aa		7.56	□□□□□ -1.2
MCF2L-222	ENST00000469558	IGKV3OR2-268	A0A0C4DH90	116 aa		7.55	□□□□□ -1.2
MCF2L-222	ENST00000469558	PPBP	P02775	128 aa		7.55	□□□□□ -1.2
MCF2L-222	ENST00000469558	SLPI	P03973	132 aa		7.55	□□□□□ -1.2
MCF2L-222	ENST00000469558	TMEM136	Q6ZRR5	245 aa		7.55	□□□□□ -1.2
MCF2L-222	ENST00000469558	ORMDL3	Q8N138	153 aa		7.55	□□□□□ -1.2
MCF2L-222	ENST00000469558	OR5A1	Q8NGJ0	315 aa		7.55	□□□□□ -1.2
MCF2L-222	ENST00000469558	LINC00959	A0A1B0GUT2	108 aa		7.54	□□□□□ -1.2
MCF2L-222	ENST00000469558	GAGE12H	A6NDE8	117 aa		7.54	□□□□□ -1.2
MCF2L-222	ENST00000469558	PRSS47	A8MTI9	375 aa		7.54	□□□□□ -1.2
MCF2L-222	ENST00000469558	FCER1G	P30273	86 aa		7.54	□□□□□ -1.2
MCF2L-222	ENST00000469558	RPL39	P62891	51 aa	Known RBP	7.54	□□□□□ -1.2
MCF2L-222	ENST00000469558	FOXI1	Q12951	378 aa		7.54	□□□□□ -1.2
MCF2L-222	ENST00000469558	C14orf177	Q52M58	125 aa		7.54	□□□□□ -1.2
MCF2L-222	ENST00000469558	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	7.54	□□□□□ -1.2
MCF2L-222	ENST00000469558	PRELID3A	Q96N28	172 aa		7.54	□□□□□ -1.2
MCF2L-222	ENST00000469558	KIR2DL4	Q99706	377 aa		7.54	□□□□□ -1.2
MCF2L-222	ENST00000469558	CTDSP1	Q9GZU7	261 aa		7.54	□□□□□ -1.2
MCF2L-222	ENST00000469558	CSDC2	Q9Y534	153 aa	Known RBP	7.54	□□□□□ -1.2
MCF2L-222	ENST00000469558	SRRM2	Q9UQ35	2752 aa	Known RBP	7.54	□□□□□ -1.2
MCF2L-222	ENST00000469558	TCAP	O15273	167 aa		7.53	□□□□□ -1.2
MCF2L-222	ENST00000469558	RNASE13	Q5GAN3	156 aa	Known RBP	7.53	□□□□□ -1.2
MCF2L-222	ENST00000469558		Q6ZUT4	128 aa		7.53	□□□□□ -1.2
MCF2L-222	ENST00000469558	ZNF664	Q8N3J9	261 aa		7.53	□□□□□ -1.2
MCF2L-222	ENST00000469558	TIMM21	Q9BVV7	248 aa		7.53	□□□□□ -1.2
MCF2L-222	ENST00000469558	CNBP	P62633	177 aa	Known RBP	7.52	□□□□□ -1.21
MCF2L-222	ENST00000469558	C9orf163	Q8N9P6	203 aa		7.52	□□□□□ -1.21
MCF2L-222	ENST00000469558	CLRN3	Q8NCR9	226 aa		7.52	□□□□□ -1.21
MCF2L-222	ENST00000469558	TRAV9-1	A0A075B6T8	112 aa		7.51	□□□□□ -1.21
MCF2L-222	ENST00000469558	PANO1	I0J062	215 aa		7.51	□□□□□ -1.21
MCF2L-222	ENST00000469558	CCL25	O15444	150 aa		7.51	□□□□□ -1.21
MCF2L-222	ENST00000469558	SMR3B	P02814	79 aa	Predicted RBP	7.51	□□□□□ -1.21
MCF2L-222	ENST00000469558	DGAT2L7P	Q6IED9	249 aa		7.51	□□□□□ -1.21
MCF2L-222	ENST00000469558	SCX	Q7RTU7	201 aa		7.51	□□□□□ -1.21
MCF2L-222	ENST00000469558	TMEM101	Q96IK0	257 aa		7.51	□□□□□ -1.21
MCF2L-222	ENST00000469558	LAMTOR2	Q9Y2Q5	125 aa		7.51	□□□□□ -1.21
MCF2L-222	ENST00000469558	hDV102S1	A0JD36	115 aa		7.5	□□□□□ -1.21
MCF2L-222	ENST00000469558	XCL1	P47992	114 aa		7.5	□□□□□ -1.21
MCF2L-222	ENST00000469558	SDIM1	Q6ZPB5	146 aa		7.5	□□□□□ -1.21
MCF2L-222	ENST00000469558	OPRPN	Q99935	248 aa	Predicted RBP	7.5	□□□□□ -1.21
MCF2L-222	ENST00000469558	GVQW2	A0A096LPI5	108 aa	Predicted RBP	7.49	□□□□□ -1.21
MCF2L-222	ENST00000469558	RHEB	Q15382	184 aa		7.49	□□□□□ -1.21
MCF2L-222	ENST00000469558	LOC389332	A0A1B0GUA5	103 aa		7.48	□□□□□ -1.21
MCF2L-222	ENST00000469558	MRPS36	P82909	103 aa	Known RBP	7.48	□□□□□ -1.21
MCF2L-222	ENST00000469558	KIAA1644	Q3SXP7	199 aa		7.48	□□□□□ -1.21
MCF2L-222	ENST00000469558	HIGD2B	Q4VC39	106 aa		7.48	□□□□□ -1.21
MCF2L-222	ENST00000469558		Q5VSD8	79 aa		7.48	□□□□□ -1.21
MCF2L-222	ENST00000469558	CD164L2	Q6UWJ8	174 aa		7.48	□□□□□ -1.21
MCF2L-222	ENST00000469558		Q8N8P6	123 aa		7.48	□□□□□ -1.21
MCF2L-222	ENST00000469558	CHAC1	Q9BUX1	264 aa		7.48	□□□□□ -1.21
MCF2L-222	ENST00000469558	MAP1LC3A	Q9H492	121 aa		7.48	□□□□□ -1.21
MCF2L-222	ENST00000469558	SPANXA1	Q9NS26	97 aa		7.48	□□□□□ -1.21
MCF2L-222	ENST00000469558	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.48	□□□□□ -1.21
MCF2L-222	ENST00000469558	EPM2A	B3EWF7	344 aa		7.47	□□□□□ -1.21
MCF2L-222	ENST00000469558	KRTAP10-4	P60372	401 aa	Predicted RBP	7.47	□□□□□ -1.21
MCF2L-222	ENST00000469558	CIRBP	Q14011	172 aa	Known RBP	7.47	□□□□□ -1.21
MCF2L-222	ENST00000469558	CIRBP-AS1	Q8TBR5	109 aa		7.47	□□□□□ -1.21
MCF2L-222	ENST00000469558	GNB1L	Q9BYB4	327 aa		7.47	□□□□□ -1.21
MCF2L-222	ENST00000469558	RPS10P5	Q9NQ39	176 aa		7.47	□□□□□ -1.21
MCF2L-222	ENST00000469558	MYCBP2	O75592	4640 aa		7.47	□□□□□ -1.21
MCF2L-222	ENST00000469558	IGLV4-3	A0A075B6K6	122 aa		7.46	□□□□□ -1.22
MCF2L-222	ENST00000469558	TRAV13-1	A0A0B4J241	112 aa		7.46	□□□□□ -1.22
MCF2L-222	ENST00000469558	IFI27	P40305	119 aa	Predicted RBP	7.46	□□□□□ -1.22
MCF2L-222	ENST00000469558	SS18	Q15532	418 aa		7.46	□□□□□ -1.22
MCF2L-222	ENST00000469558	TMEM18	Q96B42	140 aa		7.46	□□□□□ -1.22
MCF2L-222	ENST00000469558	LINC00526	Q96FQ7	95 aa		7.46	□□□□□ -1.22
MCF2L-222	ENST00000469558	YPEL4	Q96NS1	127 aa		7.46	□□□□□ -1.22
MCF2L-222	ENST00000469558	PYGO1	Q9Y3Y4	419 aa		7.46	□□□□□ -1.22
MCF2L-222	ENST00000469558	C1orf196	B1AJZ1	125 aa		7.45	□□□□□ -1.22
MCF2L-222	ENST00000469558	APOC3	P02656	99 aa		7.45	□□□□□ -1.22
MCF2L-222	ENST00000469558	LINC00173	Q6ZV60	143 aa		7.45	□□□□□ -1.22
MCF2L-222	ENST00000469558	ALKBH7	Q9BT30	221 aa	Predicted RBP	7.45	□□□□□ -1.22
MCF2L-222	ENST00000469558	TGIF2-C20orf24	A0A0A6YYL0	155 aa		7.44	□□□□□ -1.22
MCF2L-222	ENST00000469558	IGHV3OR16-9	A0A0B4J2B5	98 aa		7.44	□□□□□ -1.22
MCF2L-222	ENST00000469558	IGHV1-58	A0A0C4DH39	117 aa		7.44	□□□□□ -1.22
MCF2L-222	ENST00000469558	LINC01546	A6NGU7	62 aa		7.44	□□□□□ -1.22
MCF2L-222	ENST00000469558	RAB5A	P20339	215 aa		7.44	□□□□□ -1.22
MCF2L-222	ENST00000469558	S100P	P25815	95 aa		7.44	□□□□□ -1.22
MCF2L-222	ENST00000469558	SMAGP	Q0VAQ4	97 aa		7.44	□□□□□ -1.22
MCF2L-222	ENST00000469558	ZC2HC1B	Q5TFG8	222 aa		7.44	□□□□□ -1.22
MCF2L-222	ENST00000469558	CFAP161	Q6P656	301 aa		7.44	□□□□□ -1.22
MCF2L-222	ENST00000469558	C2orf66	Q6UXQ4	117 aa		7.44	□□□□□ -1.22
MCF2L-222	ENST00000469558	IGIP	A6NJ69	53 aa		7.43	□□□□□ -1.22
MCF2L-222	ENST00000469558	CHTF8	P0CG12	524 aa		7.43	□□□□□ -1.22
MCF2L-222	ENST00000469558	LINC00528	Q8N1L1	170 aa		7.43	□□□□□ -1.22
MCF2L-222	ENST00000469558	MRPL18	Q9H0U6	180 aa	Known RBP	7.43	□□□□□ -1.22
MCF2L-222	ENST00000469558	NXT2	Q9NPJ8	142 aa	Known RBP	7.43	□□□□□ -1.22
MCF2L-222	ENST00000469558	PKHD1L1	Q86WI1	4243 aa		7.43	□□□□□ -1.22
MCF2L-222	ENST00000469558	FLG2	Q5D862	2391 aa	Predicted RBP	7.42	□□□□□ -1.22
MCF2L-222	ENST00000469558	IGHV3-64	A0A075B6Q5	118 aa		7.42	□□□□□ -1.22
MCF2L-222	ENST00000469558		K7EMI3	77 aa		7.42	□□□□□ -1.22
MCF2L-222	ENST00000469558	ORMDL2	Q53FV1	153 aa		7.42	□□□□□ -1.22
MCF2L-222	ENST00000469558	C5orf38	Q86SI9	138 aa		7.42	□□□□□ -1.22
MCF2L-222	ENST00000469558	SVBP	Q8N300	66 aa		7.42	□□□□□ -1.22

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