RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 FAM231DQ6ZW35 169 aa11.68□□□□□ -0.54
SRSF4-202ENST00000466448 IGHV1-58A0A0C4DH39 117 aa11.67□□□□□ -0.54
SRSF4-202ENST00000466448 LINC00959A0A1B0GUT2 108 aa11.67□□□□□ -0.54
SRSF4-202ENST00000466448 FAM231BA6NCW3 169 aa11.67□□□□□ -0.54
SRSF4-202ENST00000466448 GATCO43716 136 aaKnown RBP11.67□□□□□ -0.54
SRSF4-202ENST00000466448 PEA15Q15121 130 aa11.67□□□□□ -0.54
SRSF4-202ENST00000466448 FAM74A3Q4VXF1 159 aa11.67□□□□□ -0.54
SRSF4-202ENST00000466448 CARD19Q96LW7 228 aa11.67□□□□□ -0.54
SRSF4-202ENST00000466448 SMDT1Q9H4I9 107 aa11.67□□□□□ -0.54
SRSF4-202ENST00000466448 PKIGQ9Y2B9 76 aa11.67□□□□□ -0.54
SRSF4-202ENST00000466448 Q6ZRP5 223 aa11.66□□□□□ -0.54
SRSF4-202ENST00000466448 SMIM15Q7Z3B0 74 aa11.66□□□□□ -0.54
SRSF4-202ENST00000466448 TMEM101Q96IK0 257 aa11.66□□□□□ -0.54
SRSF4-202ENST00000466448 A8MWL6 223 aa11.65□□□□□ -0.54
SRSF4-202ENST00000466448 I3L3M4 83 aa11.65□□□□□ -0.54
SRSF4-202ENST00000466448 CT83Q5H943 113 aa11.65□□□□□ -0.54
SRSF4-202ENST00000466448 BTF3L4Q96K17 158 aa11.65□□□□□ -0.54
SRSF4-202ENST00000466448 ESDP10768 282 aa11.64□□□□□ -0.55
SRSF4-202ENST00000466448 PMCHP20382 165 aa11.64□□□□□ -0.55
SRSF4-202ENST00000466448 LINC01551Q86U37 167 aa11.64□□□□□ -0.55
SRSF4-202ENST00000466448 TRBV6-5A0A0K0K1A5 114 aa11.63□□□□□ -0.55
SRSF4-202ENST00000466448 GAS8-AS1O95177 125 aa11.63□□□□□ -0.55
SRSF4-202ENST00000466448 TSHBP01222 138 aa11.63□□□□□ -0.55
SRSF4-202ENST00000466448 SYCNQ0VAF6 134 aa11.63□□□□□ -0.55
SRSF4-202ENST00000466448 TMEM241Q24JQ0 296 aa11.63□□□□□ -0.55
SRSF4-202ENST00000466448 ZNF561-AS1K7EIQ3 104 aa11.62□□□□□ -0.55
SRSF4-202ENST00000466448 RAB14P61106 215 aa11.62□□□□□ -0.55
SRSF4-202ENST00000466448 CD164L2Q6UWJ8 174 aa11.62□□□□□ -0.55
SRSF4-202ENST00000466448 OSTCQ9NRP0 149 aa11.62□□□□□ -0.55
SRSF4-202ENST00000466448 TMEM242Q9NWH2 141 aa11.62□□□□□ -0.55
SRSF4-202ENST00000466448 PTTG1IPP53801 180 aa11.61□□□□□ -0.55
SRSF4-202ENST00000466448 SS18Q15532 418 aa11.61□□□□□ -0.55
SRSF4-202ENST00000466448 MRAP2Q96G30 205 aa11.61□□□□□ -0.55
SRSF4-202ENST00000466448 CDC42SE2Q9NRR3 84 aa11.61□□□□□ -0.55
SRSF4-202ENST00000466448 CAMPP49913 170 aa11.6□□□□□ -0.55
SRSF4-202ENST00000466448 MRPL52Q86TS9 123 aaKnown RBP11.6□□□□□ -0.55
SRSF4-202ENST00000466448 BORCS7Q96B45 105 aa11.6□□□□□ -0.55
SRSF4-202ENST00000466448 NAT8Q9UHE5 227 aa11.6□□□□□ -0.55
SRSF4-202ENST00000466448 C9JQL5 133 aa11.59□□□□□ -0.55
SRSF4-202ENST00000466448 SRSF3P84103 164 aaKnown RBP11.59□□□□□ -0.55
SRSF4-202ENST00000466448 GAGE2BQ13066 116 aa11.59□□□□□ -0.55
SRSF4-202ENST00000466448 TSKUQ8WUA8 353 aa11.59□□□□□ -0.55
SRSF4-202ENST00000466448 ST20Q9HBF5 79 aa11.59□□□□□ -0.55
SRSF4-202ENST00000466448 IGLV4-69A0A075B6H9 119 aa11.58□□□□□ -0.56
SRSF4-202ENST00000466448 LOC107984640A0A0U1RRK4 108 aa11.58□□□□□ -0.56
SRSF4-202ENST00000466448 ZNF664Q8N3J9 261 aa11.58□□□□□ -0.56
SRSF4-202ENST00000466448 A0A1W2PNN7 141 aa11.57□□□□□ -0.56
SRSF4-202ENST00000466448 RPL23P62829 140 aaKnown RBP11.57□□□□□ -0.56
SRSF4-202ENST00000466448 ADIRFQ15847 76 aa11.57□□□□□ -0.56
SRSF4-202ENST00000466448 ISOC2Q96AB3 205 aa11.57□□□□□ -0.56
SRSF4-202ENST00000466448 POLR2KP53803 58 aaKnown RBP11.56□□□□□ -0.56
SRSF4-202ENST00000466448 TRBV27A0A0K0K1C4 114 aa11.55□□□□□ -0.56
SRSF4-202ENST00000466448 A0A1B0GUT8 65 aa11.55□□□□□ -0.56
SRSF4-202ENST00000466448 C7orf77A4D0Y5 90 aa11.55□□□□□ -0.56
SRSF4-202ENST00000466448 HIGD1CA8MV81 97 aa11.55□□□□□ -0.56
SRSF4-202ENST00000466448 MALP21145 153 aa11.55□□□□□ -0.56
SRSF4-202ENST00000466448 NUP35Q8NFH5 326 aa11.55□□□□□ -0.56
SRSF4-202ENST00000466448 COX7A2LO14548 114 aa11.54□□□□□ -0.56
SRSF4-202ENST00000466448 PSORS1C2Q9UIG4 136 aa11.54□□□□□ -0.56
SRSF4-202ENST00000466448 V9GYV3 84 aa11.54□□□□□ -0.56
SRSF4-202ENST00000466448 C1orf196B1AJZ1 125 aa11.53□□□□□ -0.56
SRSF4-202ENST00000466448 APOMO95445 188 aa11.53□□□□□ -0.56
SRSF4-202ENST00000466448 CAMK2N2Q96S95 79 aa11.53□□□□□ -0.56
SRSF4-202ENST00000466448 TMEM191AQ9H0A3 160 aa11.53□□□□□ -0.56
SRSF4-202ENST00000466448 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.52□□□□□ -0.57
SRSF4-202ENST00000466448 RAB4AP20338 218 aa11.52□□□□□ -0.57
SRSF4-202ENST00000466448 C9orf116Q5BN46 136 aaPredicted RBP11.52□□□□□ -0.57
SRSF4-202ENST00000466448 NAT8BQ9UHF3 227 aa11.52□□□□□ -0.57
SRSF4-202ENST00000466448 MT-ND6P03923 174 aa11.51□□□□□ -0.57
SRSF4-202ENST00000466448 RIGQ13278 110 aa11.51□□□□□ -0.57
SRSF4-202ENST00000466448 RNASE13Q5GAN3 156 aaKnown RBP11.51□□□□□ -0.57
SRSF4-202ENST00000466448 CLLU1Q5K131 121 aa11.51□□□□□ -0.57
SRSF4-202ENST00000466448 AMN1Q8IY45 258 aa11.51□□□□□ -0.57
SRSF4-202ENST00000466448 RPL18AQ02543 176 aaKnown RBP11.5□□□□□ -0.57
SRSF4-202ENST00000466448 C2orf48Q96LS8 159 aa11.5□□□□□ -0.57
SRSF4-202ENST00000466448 UBE2D4Q9Y2X8 147 aa11.5□□□□□ -0.57
SRSF4-202ENST00000466448 CSDC2Q9Y534 153 aaKnown RBP11.5□□□□□ -0.57
SRSF4-202ENST00000466448 LPAP08519 4548 aa11.5□□□□□ -0.57
SRSF4-202ENST00000466448 TRAV13-1A0A0B4J241 112 aa11.49□□□□□ -0.57
SRSF4-202ENST00000466448 SMKR1H3BMG3 65 aa11.49□□□□□ -0.57
SRSF4-202ENST00000466448 FCER1GP30273 86 aa11.49□□□□□ -0.57
SRSF4-202ENST00000466448 C1orf137Q5JT78 98 aa11.49□□□□□ -0.57
SRSF4-202ENST00000466448 PHF5AQ7RTV0 110 aaKnown RBP11.49□□□□□ -0.57
SRSF4-202ENST00000466448 VCYO14598 125 aa11.48□□□□□ -0.57
SRSF4-202ENST00000466448 C5orf38Q86SI9 138 aa11.48□□□□□ -0.57
SRSF4-202ENST00000466448 OPRPNQ99935 248 aaPredicted RBP11.48□□□□□ -0.57
SRSF4-202ENST00000466448 SMIM27A0A1W2PRY6 76 aa11.47□□□□□ -0.57
SRSF4-202ENST00000466448 A0A1B0GW15 77 aa11.46□□□□□ -0.57
SRSF4-202ENST00000466448 PPP1R2P9O14990 202 aa11.46□□□□□ -0.57
SRSF4-202ENST00000466448 SPAG11BQ08648 103 aa11.46□□□□□ -0.57
SRSF4-202ENST00000466448 PNRC1Q12796 327 aaPredicted RBP11.46□□□□□ -0.57
SRSF4-202ENST00000466448 Q6ZUT4 128 aa11.46□□□□□ -0.57
SRSF4-202ENST00000466448 NRACQ8N912 160 aa11.46□□□□□ -0.57
SRSF4-202ENST00000466448 SUMO2P61956 95 aaKnown RBP11.45□□□□□ -0.58
SRSF4-202ENST00000466448 SMAGPQ0VAQ4 97 aa11.45□□□□□ -0.58
SRSF4-202ENST00000466448 IFITM2Q01629 132 aa11.44□□□□□ -0.58
SRSF4-202ENST00000466448 RNF151Q2KHN1 245 aa11.44□□□□□ -0.58
SRSF4-202ENST00000466448 PRR26Q8N8Z3 221 aa11.44□□□□□ -0.58
SRSF4-202ENST00000466448 KIR2DL4Q99706 377 aa11.44□□□□□ -0.58
SRSF4-202ENST00000466448 PPP1R17O96001 155 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms