RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 RBMY1A1P0DJD3 496 aaKnown RBP4.33□□□□□ -1.72
CLK1-207ENST00000461981 RBMY1CP0DJD4 496 aa4.33□□□□□ -1.72
CLK1-207ENST00000461981 WT1-ASQ06250 92 aa4.33□□□□□ -1.72
CLK1-207ENST00000461981 RBMY1FQ15415 496 aaKnown RBP4.33□□□□□ -1.72
CLK1-207ENST00000461981 HCP5Q6MZN7 132 aa4.33□□□□□ -1.72
CLK1-207ENST00000461981 FAM216BQ8N7L0 139 aa4.33□□□□□ -1.72
CLK1-207ENST00000461981 GAFA1Q96PS6 74 aa4.33□□□□□ -1.72
CLK1-207ENST00000461981 LINC00574Q9H8X3 128 aa4.33□□□□□ -1.72
CLK1-207ENST00000461981 MXRA5Q9NR99 2828 aa4.33□□□□□ -1.72
CLK1-207ENST00000461981 IGLV4-69A0A075B6H9 119 aa4.33□□□□□ -1.72
CLK1-207ENST00000461981 TRAV23DV6A0A075B6W5 121 aa4.33□□□□□ -1.72
CLK1-207ENST00000461981 SOSTDC1Q6X4U4 206 aa4.33□□□□□ -1.72
CLK1-207ENST00000461981 TOMM6Q96B49 74 aa4.33□□□□□ -1.72
CLK1-207ENST00000461981 AMELXQ99217 191 aa4.33□□□□□ -1.72
CLK1-207ENST00000461981 SMIM2Q9BVW6 85 aa4.33□□□□□ -1.72
CLK1-207ENST00000461981 EPM2AB3EWF7 344 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 NDUFC2-KCTD14E9PQ53 114 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 IGHV1-8P0DP01 117 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 IGHV4-59P01825 116 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 XCL1P47992 114 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 ADAMTSL4-AS1Q5T5F5 129 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 LYPD5Q6UWN5 251 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 STHQ8IWL8 128 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 FANCD2OSQ96PS1 177 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 XCL2Q9UBD3 114 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 PAX4O43316 350 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 NXPH4O95158 308 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 IGHG2P01859 326 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 CD164Q04900 197 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 LYPD2Q6UXB3 125 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 THAP8Q8NA92 274 aa4.32□□□□□ -1.72
CLK1-207ENST00000461981 TRBV6-1A0A0K0K1D8 114 aa4.31□□□□□ -1.72
CLK1-207ENST00000461981 DNAL4O96015 105 aa4.31□□□□□ -1.72
CLK1-207ENST00000461981 SUB1P53999 127 aaKnown RBP eCLIP4.31□□□□□ -1.72
CLK1-207ENST00000461981 IGFL4Q6B9Z1 124 aa4.31□□□□□ -1.72
CLK1-207ENST00000461981 IGHV3OR16-10A0A075B7F0 116 aa4.31□□□□□ -1.72
CLK1-207ENST00000461981 TRBV7-6A0A0J9YX20 115 aa4.31□□□□□ -1.72
CLK1-207ENST00000461981 H7BZZ5 65 aa4.31□□□□□ -1.72
CLK1-207ENST00000461981 RPL39LQ96EH5 51 aaKnown RBP4.31□□□□□ -1.72
CLK1-207ENST00000461981 MOB4Q9Y3A3 225 aa4.31□□□□□ -1.72
CLK1-207ENST00000461981 SNURFQ9Y675 71 aa4.31□□□□□ -1.72
CLK1-207ENST00000461981 SAA4P35542 130 aa4.3□□□□□ -1.72
CLK1-207ENST00000461981 C9orf66Q5T8R8 295 aa4.3□□□□□ -1.72
CLK1-207ENST00000461981 APRG1Q8IVJ8 170 aa4.3□□□□□ -1.72
CLK1-207ENST00000461981 NDUFA4L2Q9NRX3 87 aa4.3□□□□□ -1.72
CLK1-207ENST00000461981 RELNP78509 3460 aa4.3□□□□□ -1.72
CLK1-207ENST00000461981 BAALC-AS2P0C853 105 aa4.3□□□□□ -1.72
CLK1-207ENST00000461981 PLGLAQ15195 96 aa4.3□□□□□ -1.72
CLK1-207ENST00000461981 MRPL55Q7Z7F7 128 aaKnown RBP4.3□□□□□ -1.72
CLK1-207ENST00000461981 ZNF491Q8N8L2 437 aa4.3□□□□□ -1.72
CLK1-207ENST00000461981 CCKP06307 115 aa4.3□□□□□ -1.72
CLK1-207ENST00000461981 SPANXN1Q5VSR9 72 aa4.3□□□□□ -1.72
CLK1-207ENST00000461981 ZNF575Q86XF7 245 aa4.3□□□□□ -1.72
CLK1-207ENST00000461981 C11orf45Q8TAV5 145 aa4.3□□□□□ -1.72
CLK1-207ENST00000461981 LINC00846Q9NV44 126 aa4.3□□□□□ -1.72
CLK1-207ENST00000461981 COL6A5A8TX70 2615 aa4.3□□□□□ -1.72
CLK1-207ENST00000461981 BUB3O43684 328 aa4.29□□□□□ -1.72
CLK1-207ENST00000461981 SUMO2P61956 95 aaKnown RBP4.29□□□□□ -1.72
CLK1-207ENST00000461981 RPL39P62891 51 aaKnown RBP4.29□□□□□ -1.72
CLK1-207ENST00000461981 SONP18583 2426 aaKnown RBP4.29□□□□□ -1.72
CLK1-207ENST00000461981 CELSR1Q9NYQ6 3014 aa4.29□□□□□ -1.72
CLK1-207ENST00000461981 F8WEM9 126 aa4.29□□□□□ -1.72
CLK1-207ENST00000461981 TSHBP01222 138 aa4.29□□□□□ -1.72
CLK1-207ENST00000461981 FAM201AQ5SY85 155 aa4.29□□□□□ -1.72
CLK1-207ENST00000461981 DAND5Q8N907 189 aa4.29□□□□□ -1.72
CLK1-207ENST00000461981 C14orf132Q9NPU4 83 aa4.29□□□□□ -1.72
CLK1-207ENST00000461981 A0A0J9YXY3 114 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 K7EIL1 84 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 INAFM2P0DMQ5 153 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 RPL28P46779 137 aaKnown RBP4.28□□□□□ -1.72
CLK1-207ENST00000461981 FAM229BQ4G0N7 80 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 ZNRF1Q8ND25 227 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 RMI2Q96E14 147 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 CNFNQ9BYD5 112 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 Q9HAA7 133 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 UBE2D4Q9Y2X8 147 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 H3BUX3 64 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 MGPP08493 103 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 Q6JHZ5 121 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 TMEM14CQ9P0S9 112 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 ZNF469Q96JG9 3925 aaPredicted RBP4.28□□□□□ -1.72
CLK1-207ENST00000461981 TRBV12-3P01733 135 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 BRD3OSQ6XYD6 125 aa4.28□□□□□ -1.72
CLK1-207ENST00000461981 NIPBLQ6KC79 2804 aaeCLIP4.27□□□□□ -1.73
CLK1-207ENST00000461981 A0A087WZ39 114 aa4.27□□□□□ -1.73
CLK1-207ENST00000461981 LCE6AA0A183 80 aa4.27□□□□□ -1.73
CLK1-207ENST00000461981 HOXD3P31249 432 aaPredicted RBP4.27□□□□□ -1.73
CLK1-207ENST00000461981 OPRPNQ99935 248 aaPredicted RBP4.27□□□□□ -1.73
CLK1-207ENST00000461981 M0R381 172 aa4.27□□□□□ -1.73
CLK1-207ENST00000461981 TMEM61Q8N0U2 210 aa4.27□□□□□ -1.73
CLK1-207ENST00000461981 DPM3Q9P2X0 92 aa4.27□□□□□ -1.73
CLK1-207ENST00000461981 ZFHX3Q15911 3703 aa4.27□□□□□ -1.73
CLK1-207ENST00000461981 LEPROTO15243 131 aa4.26□□□□□ -1.73
CLK1-207ENST00000461981 C9orf129Q5T035 196 aaKnown RBP4.26□□□□□ -1.73
CLK1-207ENST00000461981 CCL13Q99616 98 aa4.26□□□□□ -1.73
CLK1-207ENST00000461981 S4R3C0 116 aa4.26□□□□□ -1.73
CLK1-207ENST00000461981 IGKV1D-17A0A075B6S4 117 aa4.26□□□□□ -1.73
CLK1-207ENST00000461981 IGKV3D-20A0A0C4DH25 116 aa4.26□□□□□ -1.73
CLK1-207ENST00000461981 H3BUA1 57 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms