RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 A0A1B0GUT8 65 aa5.79□□□□□ -1.48
LDB1-203ENST00000461873 H7C423 109 aa5.79□□□□□ -1.48
LDB1-203ENST00000461873 FABP9Q0Z7S8 132 aa5.79□□□□□ -1.48
LDB1-203ENST00000461873 RIGQ13278 110 aa5.79□□□□□ -1.48
LDB1-203ENST00000461873 KIAA1644Q3SXP7 199 aa5.79□□□□□ -1.48
LDB1-203ENST00000461873 ST20Q9HBF5 79 aa5.79□□□□□ -1.48
LDB1-203ENST00000461873 IGHV3-64A0A075B6Q5 118 aa5.78□□□□□ -1.48
LDB1-203ENST00000461873 FAM231BA6NCW3 169 aa5.78□□□□□ -1.48
LDB1-203ENST00000461873 I3L3M4 83 aa5.78□□□□□ -1.48
LDB1-203ENST00000461873 PPP1R17O96001 155 aa5.78□□□□□ -1.48
LDB1-203ENST00000461873 TRGC2P03986 189 aa5.78□□□□□ -1.48
LDB1-203ENST00000461873 PRSS1P07477 247 aa5.78□□□□□ -1.48
LDB1-203ENST00000461873 TMEM136Q6ZRR5 245 aa5.78□□□□□ -1.48
LDB1-203ENST00000461873 GATD1Q8NB37 220 aa5.78□□□□□ -1.48
LDB1-203ENST00000461873 C20orf203Q8NBC4 194 aa5.78□□□□□ -1.48
LDB1-203ENST00000461873 CIRBP-AS1Q8TBR5 109 aa5.78□□□□□ -1.48
LDB1-203ENST00000461873 CNFNQ9BYD5 112 aa5.78□□□□□ -1.48
LDB1-203ENST00000461873 PKIGQ9Y2B9 76 aa5.78□□□□□ -1.48
LDB1-203ENST00000461873 TMA7Q9Y2S6 64 aaKnown RBP5.78□□□□□ -1.48
LDB1-203ENST00000461873 TRAPPC1Q9Y5R8 145 aa5.78□□□□□ -1.48
LDB1-203ENST00000461873 IGLV4-60A0A075B6I1 120 aa5.77□□□□□ -1.49
LDB1-203ENST00000461873 TRAV9-1A0A075B6T8 112 aa5.77□□□□□ -1.49
LDB1-203ENST00000461873 A0A1B0GXF2 115 aa5.77□□□□□ -1.49
LDB1-203ENST00000461873 SDHAF1A6NFY7 115 aa5.77□□□□□ -1.49
LDB1-203ENST00000461873 ZNF25P17030 456 aaPredicted RBP5.77□□□□□ -1.49
LDB1-203ENST00000461873 FCER1GP30273 86 aa5.77□□□□□ -1.49
LDB1-203ENST00000461873 RPL37AP61513 92 aaKnown RBP5.77□□□□□ -1.49
LDB1-203ENST00000461873 C9orf163Q8N9P6 203 aa5.77□□□□□ -1.49
LDB1-203ENST00000461873 RPL39LQ96EH5 51 aaKnown RBP5.77□□□□□ -1.49
LDB1-203ENST00000461873 MRAP2Q96G30 205 aa5.77□□□□□ -1.49
LDB1-203ENST00000461873 MRPL18Q9H0U6 180 aaKnown RBP5.77□□□□□ -1.49
LDB1-203ENST00000461873 DNAH8Q96JB1 4490 aa5.76□□□□□ -1.49
LDB1-203ENST00000461873 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.76□□□□□ -1.49
LDB1-203ENST00000461873 IGKV2-29A2NJV5 120 aaPredicted RBP5.76□□□□□ -1.49
LDB1-203ENST00000461873 GAGE12HA6NDE8 117 aa5.76□□□□□ -1.49
LDB1-203ENST00000461873 SMKR1H3BMG3 65 aa5.76□□□□□ -1.49
LDB1-203ENST00000461873 HBBP68871 147 aa5.76□□□□□ -1.49
LDB1-203ENST00000461873 SS18Q15532 418 aa5.76□□□□□ -1.49
LDB1-203ENST00000461873 AMN1Q8IY45 258 aa5.76□□□□□ -1.49
LDB1-203ENST00000461873 OR5A1Q8NGJ0 315 aa5.76□□□□□ -1.49
LDB1-203ENST00000461873 TMEM18Q96B42 140 aa5.76□□□□□ -1.49
LDB1-203ENST00000461873 GAS8-AS1O95177 125 aa5.75□□□□□ -1.49
LDB1-203ENST00000461873 FGF6P10767 208 aa5.75□□□□□ -1.49
LDB1-203ENST00000461873 ATP5L2Q7Z4Y8 100 aa5.75□□□□□ -1.49
LDB1-203ENST00000461873 KIR2DL4Q99706 377 aa5.75□□□□□ -1.49
LDB1-203ENST00000461873 GNB1LQ9BYB4 327 aa5.75□□□□□ -1.49
LDB1-203ENST00000461873 TMEM191AQ9H0A3 160 aa5.75□□□□□ -1.49
LDB1-203ENST00000461873 VPS13BQ7Z7G8 4022 aa5.75□□□□□ -1.49
LDB1-203ENST00000461873 C1orf196B1AJZ1 125 aa5.74□□□□□ -1.49
LDB1-203ENST00000461873 VCYO14598 125 aa5.74□□□□□ -1.49
LDB1-203ENST00000461873 S100A8P05109 93 aa5.74□□□□□ -1.49
LDB1-203ENST00000461873 MALP21145 153 aa5.74□□□□□ -1.49
LDB1-203ENST00000461873 CNBPP62633 177 aaKnown RBP5.74□□□□□ -1.49
LDB1-203ENST00000461873 MRPL51Q4U2R6 128 aaKnown RBP5.74□□□□□ -1.49
LDB1-203ENST00000461873 C7orf33Q8WU49 177 aa5.74□□□□□ -1.49
LDB1-203ENST00000461873 CHCHD10Q8WYQ3 142 aaPredicted RBP5.74□□□□□ -1.49
LDB1-203ENST00000461873 RNF185Q96GF1 192 aa5.74□□□□□ -1.49
LDB1-203ENST00000461873 TRBV6-5A0A0K0K1A5 114 aa5.73□□□□□ -1.49
LDB1-203ENST00000461873 ZNF561-AS1K7EIQ3 104 aa5.73□□□□□ -1.49
LDB1-203ENST00000461873 PHOX2AO14813 284 aa5.73□□□□□ -1.49
LDB1-203ENST00000461873 RAB4AP20338 218 aa5.73□□□□□ -1.49
LDB1-203ENST00000461873 XCL1P47992 114 aa5.73□□□□□ -1.49
LDB1-203ENST00000461873 HIGD2BQ4VC39 106 aa5.73□□□□□ -1.49
LDB1-203ENST00000461873 FAM104BQ5XKR9 115 aa5.73□□□□□ -1.49
LDB1-203ENST00000461873 A0A1B0GW15 77 aa5.72□□□□□ -1.49
LDB1-203ENST00000461873 TCAPO15273 167 aa5.72□□□□□ -1.49
LDB1-203ENST00000461873 NDUFA6P56556 154 aa5.72□□□□□ -1.49
LDB1-203ENST00000461873 COX19Q49B96 90 aa5.72□□□□□ -1.49
LDB1-203ENST00000461873 FLG2Q5D862 2391 aaPredicted RBP5.71□□□□□ -1.5
LDB1-203ENST00000461873 IGHV1-58A0A0C4DH39 117 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 LOC389332A0A1B0GUA5 103 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 KRTAP29-1A8MX34 341 aaPredicted RBP5.71□□□□□ -1.5
LDB1-203ENST00000461873 D6R8Y8 96 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 CCL25O15444 150 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 HIST1H2BKO60814 126 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 OXTP01178 125 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 HIST1H2BJP06899 126 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 HIST1H2BOP23527 126 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 CKS2P33552 79 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 HIST1H2BBP33778 126 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 HIST1H2BDP58876 126 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 HIST1H2BCP62807 126 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 HIST2H2BEQ16778 126 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 MAJINQ3KP22 176 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.71□□□□□ -1.5
LDB1-203ENST00000461873 KRTAP26-1Q6PEX3 210 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 SDIM1Q6ZPB5 146 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 HIST1H2BHQ93079 126 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 HIST1H2BNQ99877 126 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 HIST1H2BMQ99879 126 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 ALKBH7Q9BT30 221 aaPredicted RBP5.71□□□□□ -1.5
LDB1-203ENST00000461873 LINC00474Q9P2X8 69 aa5.71□□□□□ -1.5
LDB1-203ENST00000461873 DMBT1Q9UGM3 2413 aaPredicted RBP5.71□□□□□ -1.5
LDB1-203ENST00000461873 SRRM2Q9UQ35 2752 aaKnown RBP5.71□□□□□ -1.5
LDB1-203ENST00000461873 HERC1Q15751 4861 aa5.7□□□□□ -1.5
LDB1-203ENST00000461873 IGKV2-24A0A0C4DH68 120 aa5.7□□□□□ -1.5
LDB1-203ENST00000461873 TRBV27A0A0K0K1C4 114 aa5.7□□□□□ -1.5
LDB1-203ENST00000461873 LINC00959A0A1B0GUT2 108 aa5.7□□□□□ -1.5
LDB1-203ENST00000461873 APOMO95445 188 aa5.7□□□□□ -1.5
LDB1-203ENST00000461873 MT-ND6P03923 174 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms