RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 CHCHD10Q8WYQ3 142 aaPredicted RBP10.02□□□□□ -0.81
VARS-219ENST00000461328 C20orf78Q9BR46 151 aa10.02□□□□□ -0.81
VARS-219ENST00000461328 TNFRSF6BO95407 300 aa10.01□□□□□ -0.81
VARS-219ENST00000461328 CLRN3Q8NCR9 226 aa10.01□□□□□ -0.81
VARS-219ENST00000461328 AP5S1Q9NUS5 200 aa10.01□□□□□ -0.81
VARS-219ENST00000461328 PPBPP02775 128 aa10□□□□□ -0.81
VARS-219ENST00000461328 MRPL52Q86TS9 123 aaKnown RBP10□□□□□ -0.81
VARS-219ENST00000461328 ORMDL3Q8N138 153 aa10□□□□□ -0.81
VARS-219ENST00000461328 TMEM18Q96B42 140 aa10□□□□□ -0.81
VARS-219ENST00000461328 SMIM2Q9BVW6 85 aa10□□□□□ -0.81
VARS-219ENST00000461328 FAT1Q14517 4588 aa10□□□□□ -0.81
VARS-219ENST00000461328 TCAPO15273 167 aa9.99□□□□□ -0.81
VARS-219ENST00000461328 NPYP01303 97 aa9.99□□□□□ -0.81
VARS-219ENST00000461328 XCL1P47992 114 aa9.99□□□□□ -0.81
VARS-219ENST00000461328 CFAP161Q6P656 301 aa9.99□□□□□ -0.81
VARS-219ENST00000461328 SCXQ7RTU7 201 aa9.99□□□□□ -0.81
VARS-219ENST00000461328 COMMD7Q86VX2 200 aa9.99□□□□□ -0.81
VARS-219ENST00000461328 TRBV24-1A0A075B6N3 115 aa9.98□□□□□ -0.81
VARS-219ENST00000461328 TMEM218A2RU14 115 aa9.98□□□□□ -0.81
VARS-219ENST00000461328 ADCYAP1P18509 176 aa9.98□□□□□ -0.81
VARS-219ENST00000461328 RPL32P62910 135 aaKnown RBP9.98□□□□□ -0.81
VARS-219ENST00000461328 ZNF664Q8N3J9 261 aa9.98□□□□□ -0.81
VARS-219ENST00000461328 PHOX2AO14813 284 aa9.97□□□□□ -0.81
VARS-219ENST00000461328 CCL25O15444 150 aa9.97□□□□□ -0.81
VARS-219ENST00000461328 SS18Q15532 418 aa9.97□□□□□ -0.81
VARS-219ENST00000461328 TMEM136Q6ZRR5 245 aa9.97□□□□□ -0.81
VARS-219ENST00000461328 LINC00528Q8N1L1 170 aa9.97□□□□□ -0.81
VARS-219ENST00000461328 PRELID3AQ96N28 172 aa9.97□□□□□ -0.81
VARS-219ENST00000461328 CHAC1Q9BUX1 264 aa9.97□□□□□ -0.81
VARS-219ENST00000461328 CDC42SE2Q9NRR3 84 aa9.97□□□□□ -0.81
VARS-219ENST00000461328 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.96□□□□□ -0.82
VARS-219ENST00000461328 LINC00959A0A1B0GUT2 108 aa9.96□□□□□ -0.82
VARS-219ENST00000461328 PLA2G1BP04054 148 aaKnown RBP9.96□□□□□ -0.82
VARS-219ENST00000461328 HIGD2BQ4VC39 106 aa9.96□□□□□ -0.82
VARS-219ENST00000461328 UBE2D4Q9Y2X8 147 aa9.96□□□□□ -0.82
VARS-219ENST00000461328 SRRM2Q9UQ35 2752 aaKnown RBP9.96□□□□□ -0.82
VARS-219ENST00000461328 RAB5AP20339 215 aa9.95□□□□□ -0.82
VARS-219ENST00000461328 CNBPP62633 177 aaKnown RBP9.95□□□□□ -0.82
VARS-219ENST00000461328 RNASE13Q5GAN3 156 aaKnown RBP9.95□□□□□ -0.82
VARS-219ENST00000461328 C15orf56Q8N910 161 aa9.95□□□□□ -0.82
VARS-219ENST00000461328 C9orf163Q8N9P6 203 aa9.95□□□□□ -0.82
VARS-219ENST00000461328 FOXI1Q12951 378 aa9.94□□□□□ -0.82
VARS-219ENST00000461328 Q6ZUT4 128 aa9.94□□□□□ -0.82
VARS-219ENST00000461328 CIRBP-AS1Q8TBR5 109 aa9.94□□□□□ -0.82
VARS-219ENST00000461328 SEC11CQ9BY50 192 aa9.94□□□□□ -0.82
VARS-219ENST00000461328 CTDSP1Q9GZU7 261 aa9.94□□□□□ -0.82
VARS-219ENST00000461328 MAP1LC3AQ9H492 121 aa9.94□□□□□ -0.82
VARS-219ENST00000461328 CSDC2Q9Y534 153 aaKnown RBP9.94□□□□□ -0.82
VARS-219ENST00000461328 DNAH8Q96JB1 4490 aa9.94□□□□□ -0.82
VARS-219ENST00000461328 VPS13BQ7Z7G8 4022 aa9.93□□□□□ -0.82
VARS-219ENST00000461328 TRAV13-1A0A0B4J241 112 aa9.93□□□□□ -0.82
VARS-219ENST00000461328 RPL39P62891 51 aaKnown RBP9.93□□□□□ -0.82
VARS-219ENST00000461328 IMMP2LQ96T52 175 aa9.93□□□□□ -0.82
VARS-219ENST00000461328 LAMTOR2Q9Y2Q5 125 aa9.93□□□□□ -0.82
VARS-219ENST00000461328 IGHV3-64A0A075B6Q5 118 aa9.92□□□□□ -0.82
VARS-219ENST00000461328 LOC389332A0A1B0GUA5 103 aa9.92□□□□□ -0.82
VARS-219ENST00000461328 S100PP25815 95 aa9.92□□□□□ -0.82
VARS-219ENST00000461328 TIMM21Q9BVV7 248 aa9.92□□□□□ -0.82
VARS-219ENST00000461328 GVQW2A0A096LPI5 108 aaPredicted RBP9.91□□□□□ -0.82
VARS-219ENST00000461328 IGHV1-58A0A0C4DH39 117 aa9.91□□□□□ -0.82
VARS-219ENST00000461328 C1orf196B1AJZ1 125 aa9.91□□□□□ -0.82
VARS-219ENST00000461328 CD164L2Q6UWJ8 174 aa9.91□□□□□ -0.82
VARS-219ENST00000461328 SPANXA1Q9NS26 97 aa9.91□□□□□ -0.82
VARS-219ENST00000461328 MALP21145 153 aa9.9□□□□□ -0.82
VARS-219ENST00000461328 TRAV9-1A0A075B6T8 112 aa9.89□□□□□ -0.83
VARS-219ENST00000461328 COX7A2LO14548 114 aa9.89□□□□□ -0.83
VARS-219ENST00000461328 SLPIP03973 132 aa9.89□□□□□ -0.83
VARS-219ENST00000461328 IFI27P40305 119 aaPredicted RBP9.89□□□□□ -0.83
VARS-219ENST00000461328 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.89□□□□□ -0.83
VARS-219ENST00000461328 SDIM1Q6ZPB5 146 aa9.88□□□□□ -0.83
VARS-219ENST00000461328 DPH3Q96FX2 82 aa9.88□□□□□ -0.83
VARS-219ENST00000461328 FLG2Q5D862 2391 aaPredicted RBP9.88□□□□□ -0.83
VARS-219ENST00000461328 IFITM10A6NMD0 228 aa9.87□□□□□ -0.83
VARS-219ENST00000461328 ZNF561-AS1K7EIQ3 104 aa9.87□□□□□ -0.83
VARS-219ENST00000461328 Q8N8P6 123 aa9.87□□□□□ -0.83
VARS-219ENST00000461328 OPRPNQ99935 248 aaPredicted RBP9.87□□□□□ -0.83
VARS-219ENST00000461328 RPS10P5Q9NQ39 176 aa9.87□□□□□ -0.83
VARS-219ENST00000461328 MRPS36P82909 103 aaKnown RBP9.86□□□□□ -0.83
VARS-219ENST00000461328 RHEBQ15382 184 aa9.86□□□□□ -0.83
VARS-219ENST00000461328 LINC00526Q96FQ7 95 aa9.86□□□□□ -0.83
VARS-219ENST00000461328 DMBT1Q9UGM3 2413 aaPredicted RBP9.86□□□□□ -0.83
VARS-219ENST00000461328 PRSS47A8MTI9 375 aa9.85□□□□□ -0.83
VARS-219ENST00000461328 CHTF8P0CG12 524 aa9.85□□□□□ -0.83
VARS-219ENST00000461328 KIAA1644Q3SXP7 199 aa9.85□□□□□ -0.83
VARS-219ENST00000461328 ORMDL2Q53FV1 153 aa9.85□□□□□ -0.83
VARS-219ENST00000461328 C5orf38Q86SI9 138 aa9.85□□□□□ -0.83
VARS-219ENST00000461328 CARD19Q96LW7 228 aa9.85□□□□□ -0.83
VARS-219ENST00000461328 NXT2Q9NPJ8 142 aaKnown RBP9.85□□□□□ -0.83
VARS-219ENST00000461328 CYSLTR1Q9Y271 337 aa9.85□□□□□ -0.83
VARS-219ENST00000461328 CARHSP1Q9Y2V2 147 aaKnown RBP9.85□□□□□ -0.83
VARS-219ENST00000461328 PANO1I0J062 215 aa9.84□□□□□ -0.83
VARS-219ENST00000461328 APOMO95445 188 aa9.84□□□□□ -0.83
VARS-219ENST00000461328 COX6A2Q02221 97 aa9.84□□□□□ -0.83
VARS-219ENST00000461328 PKIGQ9Y2B9 76 aa9.84□□□□□ -0.83
VARS-219ENST00000461328 IGKV2-24A0A0C4DH68 120 aa9.83□□□□□ -0.84
VARS-219ENST00000461328 J3QL48 77 aa9.83□□□□□ -0.84
VARS-219ENST00000461328 NDUFA5Q16718 116 aa9.83□□□□□ -0.84
VARS-219ENST00000461328 C10orf91Q5T1B1 145 aa9.83□□□□□ -0.84
VARS-219ENST00000461328 C2orf66Q6UXQ4 117 aa9.83□□□□□ -0.84
VARS-219ENST00000461328 IGLV4-3A0A075B6K6 122 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms