RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 TNFRSF6BO95407 300 aa9.26□□□□□ -0.93
THBS3-204ENST00000460050 Q5VSD8 79 aa9.26□□□□□ -0.93
THBS3-204ENST00000460050 UQCC3Q6UW78 93 aa9.26□□□□□ -0.93
THBS3-204ENST00000460050 CLRN3Q8NCR9 226 aa9.26□□□□□ -0.93
THBS3-204ENST00000460050 CHCHD10Q8WYQ3 142 aaPredicted RBP9.26□□□□□ -0.93
THBS3-204ENST00000460050 NPYP01303 97 aa9.25□□□□□ -0.93
THBS3-204ENST00000460050 ADCYAP1P18509 176 aa9.25□□□□□ -0.93
THBS3-204ENST00000460050 RPL32P62910 135 aaKnown RBP9.25□□□□□ -0.93
THBS3-204ENST00000460050 DGAT2L7PQ6IED9 249 aa9.25□□□□□ -0.93
THBS3-204ENST00000460050 hDV102S1A0JD36 115 aa9.24□□□□□ -0.93
THBS3-204ENST00000460050 TMEM218A2RU14 115 aa9.24□□□□□ -0.93
THBS3-204ENST00000460050 PPBPP02775 128 aa9.24□□□□□ -0.93
THBS3-204ENST00000460050 SMIM2Q9BVW6 85 aa9.24□□□□□ -0.93
THBS3-204ENST00000460050 CDC42SE2Q9NRR3 84 aa9.24□□□□□ -0.93
THBS3-204ENST00000460050 LINC00959A0A1B0GUT2 108 aa9.23□□□□□ -0.93
THBS3-204ENST00000460050 PHOX2AO14813 284 aa9.23□□□□□ -0.93
THBS3-204ENST00000460050 SCXQ7RTU7 201 aa9.23□□□□□ -0.93
THBS3-204ENST00000460050 ORMDL3Q8N138 153 aa9.23□□□□□ -0.93
THBS3-204ENST00000460050 ZNF664Q8N3J9 261 aa9.23□□□□□ -0.93
THBS3-204ENST00000460050 C15orf56Q8N910 161 aa9.23□□□□□ -0.93
THBS3-204ENST00000460050 C9orf163Q8N9P6 203 aa9.23□□□□□ -0.93
THBS3-204ENST00000460050 FAM229AH3BQW9 127 aa9.22□□□□□ -0.93
THBS3-204ENST00000460050 TCAPO15273 167 aa9.22□□□□□ -0.93
THBS3-204ENST00000460050 CNBPP62633 177 aaKnown RBP9.22□□□□□ -0.93
THBS3-204ENST00000460050 SMAGPQ0VAQ4 97 aa9.22□□□□□ -0.93
THBS3-204ENST00000460050 TMEM136Q6ZRR5 245 aa9.22□□□□□ -0.93
THBS3-204ENST00000460050 COMMD7Q86VX2 200 aa9.22□□□□□ -0.93
THBS3-204ENST00000460050 PRELID3AQ96N28 172 aa9.22□□□□□ -0.93
THBS3-204ENST00000460050 CHAC1Q9BUX1 264 aa9.22□□□□□ -0.93
THBS3-204ENST00000460050 AP5S1Q9NUS5 200 aa9.22□□□□□ -0.93
THBS3-204ENST00000460050 UBE2D4Q9Y2X8 147 aa9.22□□□□□ -0.93
THBS3-204ENST00000460050 CCL25O15444 150 aa9.21□□□□□ -0.94
THBS3-204ENST00000460050 XCL1P47992 114 aa9.21□□□□□ -0.94
THBS3-204ENST00000460050 CFAP161Q6P656 301 aa9.21□□□□□ -0.94
THBS3-204ENST00000460050 TMEM18Q96B42 140 aa9.21□□□□□ -0.94
THBS3-204ENST00000460050 CSDC2Q9Y534 153 aaKnown RBP9.21□□□□□ -0.94
THBS3-204ENST00000460050 FOXI1Q12951 378 aa9.2□□□□□ -0.94
THBS3-204ENST00000460050 SS18Q15532 418 aa9.2□□□□□ -0.94
THBS3-204ENST00000460050 HIGD2BQ4VC39 106 aa9.2□□□□□ -0.94
THBS3-204ENST00000460050 TIMM21Q9BVV7 248 aa9.2□□□□□ -0.94
THBS3-204ENST00000460050 SEC11CQ9BY50 192 aa9.2□□□□□ -0.94
THBS3-204ENST00000460050 SLPIP03973 132 aa9.19□□□□□ -0.94
THBS3-204ENST00000460050 RPL39P62891 51 aaKnown RBP9.19□□□□□ -0.94
THBS3-204ENST00000460050 RNASE13Q5GAN3 156 aaKnown RBP9.19□□□□□ -0.94
THBS3-204ENST00000460050 Q6ZUT4 128 aa9.19□□□□□ -0.94
THBS3-204ENST00000460050 IMMP2LQ96T52 175 aa9.19□□□□□ -0.94
THBS3-204ENST00000460050 CTDSP1Q9GZU7 261 aa9.19□□□□□ -0.94
THBS3-204ENST00000460050 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.18□□□□□ -0.94
THBS3-204ENST00000460050 LINC00528Q8N1L1 170 aa9.18□□□□□ -0.94
THBS3-204ENST00000460050 CIRBP-AS1Q8TBR5 109 aa9.18□□□□□ -0.94
THBS3-204ENST00000460050 LAMTOR2Q9Y2Q5 125 aa9.18□□□□□ -0.94
THBS3-204ENST00000460050 GVQW2A0A096LPI5 108 aaPredicted RBP9.17□□□□□ -0.94
THBS3-204ENST00000460050 INAFM2P0DMQ5 153 aa9.17□□□□□ -0.94
THBS3-204ENST00000460050 CD164L2Q6UWJ8 174 aa9.17□□□□□ -0.94
THBS3-204ENST00000460050 SDIM1Q6ZPB5 146 aa9.17□□□□□ -0.94
THBS3-204ENST00000460050 FLG2Q5D862 2391 aaPredicted RBP9.16□□□□□ -0.94
THBS3-204ENST00000460050 IGHV3-64A0A075B6Q5 118 aa9.16□□□□□ -0.94
THBS3-204ENST00000460050 TRAV13-1A0A0B4J241 112 aa9.16□□□□□ -0.94
THBS3-204ENST00000460050 LOC389332A0A1B0GUA5 103 aa9.16□□□□□ -0.94
THBS3-204ENST00000460050 C1orf196B1AJZ1 125 aa9.16□□□□□ -0.94
THBS3-204ENST00000460050 RAB5AP20339 215 aa9.16□□□□□ -0.94
THBS3-204ENST00000460050 MAP1LC3AQ9H492 121 aa9.16□□□□□ -0.94
THBS3-204ENST00000460050 SPANXA1Q9NS26 97 aa9.16□□□□□ -0.94
THBS3-204ENST00000460050 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.16□□□□□ -0.94
THBS3-204ENST00000460050 IGHV1-58A0A0C4DH39 117 aa9.15□□□□□ -0.94
THBS3-204ENST00000460050 PRSS47A8MTI9 375 aa9.15□□□□□ -0.94
THBS3-204ENST00000460050 PANO1I0J062 215 aa9.15□□□□□ -0.94
THBS3-204ENST00000460050 TRAV9-1A0A075B6T8 112 aa9.14□□□□□ -0.95
THBS3-204ENST00000460050 PLA2G1BP04054 148 aaKnown RBP9.14□□□□□ -0.95
THBS3-204ENST00000460050 FAM104AQ969W3 186 aa9.14□□□□□ -0.95
THBS3-204ENST00000460050 S100PP25815 95 aa9.13□□□□□ -0.95
THBS3-204ENST00000460050 MRPS36P82909 103 aaKnown RBP9.13□□□□□ -0.95
THBS3-204ENST00000460050 C10orf91Q5T1B1 145 aa9.13□□□□□ -0.95
THBS3-204ENST00000460050 Q8N8P6 123 aa9.13□□□□□ -0.95
THBS3-204ENST00000460050 LINC00526Q96FQ7 95 aa9.13□□□□□ -0.95
THBS3-204ENST00000460050 OPRPNQ99935 248 aaPredicted RBP9.13□□□□□ -0.95
THBS3-204ENST00000460050 CARHSP1Q9Y2V2 147 aaKnown RBP9.13□□□□□ -0.95
THBS3-204ENST00000460050 COX7A2LO14548 114 aa9.12□□□□□ -0.95
THBS3-204ENST00000460050 CIRBPQ14011 172 aaKnown RBP9.12□□□□□ -0.95
THBS3-204ENST00000460050 MYCBP2O75592 4640 aa9.12□□□□□ -0.95
THBS3-204ENST00000460050 CHTF8P0CG12 524 aa9.11□□□□□ -0.95
THBS3-204ENST00000460050 MALP21145 153 aa9.11□□□□□ -0.95
THBS3-204ENST00000460050 IFI27P40305 119 aaPredicted RBP9.11□□□□□ -0.95
THBS3-204ENST00000460050 IFITM10A6NMD0 228 aa9.1□□□□□ -0.95
THBS3-204ENST00000460050 ZNF561-AS1K7EIQ3 104 aa9.1□□□□□ -0.95
THBS3-204ENST00000460050 COX6A2Q02221 97 aa9.1□□□□□ -0.95
THBS3-204ENST00000460050 RHEBQ15382 184 aa9.1□□□□□ -0.95
THBS3-204ENST00000460050 KIAA1644Q3SXP7 199 aa9.1□□□□□ -0.95
THBS3-204ENST00000460050 C5orf38Q86SI9 138 aa9.1□□□□□ -0.95
THBS3-204ENST00000460050 RPS10P5Q9NQ39 176 aa9.1□□□□□ -0.95
THBS3-204ENST00000460050 PYGO1Q9Y3Y4 419 aa9.1□□□□□ -0.95
THBS3-204ENST00000460050 DMBT1Q9UGM3 2413 aaPredicted RBP9.09□□□□□ -0.95
THBS3-204ENST00000460050 IGLV4-3A0A075B6K6 122 aa9.09□□□□□ -0.95
THBS3-204ENST00000460050 PRSS3P2Q8NHM4 247 aa9.09□□□□□ -0.95
THBS3-204ENST00000460050 SPACA4Q8TDM5 124 aa9.09□□□□□ -0.95
THBS3-204ENST00000460050 CARD19Q96LW7 228 aa9.09□□□□□ -0.95
THBS3-204ENST00000460050 NXT2Q9NPJ8 142 aaKnown RBP9.09□□□□□ -0.95
THBS3-204ENST00000460050 CYSLTR1Q9Y271 337 aa9.09□□□□□ -0.95
THBS3-204ENST00000460050 K7EMI3 77 aa9.08□□□□□ -0.96
THBS3-204ENST00000460050 SYCNQ0VAF6 134 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms