RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 MRPL52Q86TS9 123 aaKnown RBP9.97□□□□□ -0.81
GPC1-206ENST00000455111 AMN1Q8IY45 258 aa9.97□□□□□ -0.81
GPC1-206ENST00000455111 TMEM191AQ9H0A3 160 aa9.97□□□□□ -0.81
GPC1-206ENST00000455111 TRBV27A0A0K0K1C4 114 aa9.96□□□□□ -0.82
GPC1-206ENST00000455111 HIGD1CA8MV81 97 aa9.96□□□□□ -0.82
GPC1-206ENST00000455111 TEX261Q6UWH6 196 aa9.96□□□□□ -0.82
GPC1-206ENST00000455111 NRACQ8N912 160 aa9.96□□□□□ -0.82
GPC1-206ENST00000455111 SRP19P09132 144 aaKnown RBP9.95□□□□□ -0.82
GPC1-206ENST00000455111 CEBPGP53567 150 aa9.95□□□□□ -0.82
GPC1-206ENST00000455111 KRTAP10-8P60410 259 aa9.95□□□□□ -0.82
GPC1-206ENST00000455111 SRSF9Q13242 221 aaKnown RBP eCLIP9.95□□□□□ -0.82
GPC1-206ENST00000455111 C7orf33Q8WU49 177 aa9.95□□□□□ -0.82
GPC1-206ENST00000455111 TSKUQ8WUA8 353 aa9.95□□□□□ -0.82
GPC1-206ENST00000455111 ST20Q9HBF5 79 aa9.95□□□□□ -0.82
GPC1-206ENST00000455111 V9GYV3 84 aa9.95□□□□□ -0.82
GPC1-206ENST00000455111 IGHV1-58A0A0C4DH39 117 aa9.94□□□□□ -0.82
GPC1-206ENST00000455111 BLOC1S1P78537 153 aa9.94□□□□□ -0.82
GPC1-206ENST00000455111 SMIM15Q7Z3B0 74 aa9.94□□□□□ -0.82
GPC1-206ENST00000455111 FAM104AQ969W3 186 aa9.94□□□□□ -0.82
GPC1-206ENST00000455111 A0A1B0GUT8 65 aa9.93□□□□□ -0.82
GPC1-206ENST00000455111 RNASE13Q5GAN3 156 aaKnown RBP9.93□□□□□ -0.82
GPC1-206ENST00000455111 CD164L2Q6UWJ8 174 aa9.93□□□□□ -0.82
GPC1-206ENST00000455111 ZNF664Q8N3J9 261 aa9.93□□□□□ -0.82
GPC1-206ENST00000455111 MRAP2Q96G30 205 aa9.93□□□□□ -0.82
GPC1-206ENST00000455111 CARD19Q96LW7 228 aa9.93□□□□□ -0.82
GPC1-206ENST00000455111 OSTCQ9NRP0 149 aa9.93□□□□□ -0.82
GPC1-206ENST00000455111 A0A1W2PNN7 141 aa9.92□□□□□ -0.82
GPC1-206ENST00000455111 C9JQL5 133 aa9.92□□□□□ -0.82
GPC1-206ENST00000455111 NUP35Q8NFH5 326 aa9.92□□□□□ -0.82
GPC1-206ENST00000455111 FAM210AQ96ND0 272 aa9.92□□□□□ -0.82
GPC1-206ENST00000455111 SMIM7Q9BQ49 75 aa9.92□□□□□ -0.82
GPC1-206ENST00000455111 UBE2D4Q9Y2X8 147 aa9.92□□□□□ -0.82
GPC1-206ENST00000455111 hCG_2014768A0A024R1R8 64 aa9.91□□□□□ -0.82
GPC1-206ENST00000455111 IGLV4-69A0A075B6H9 119 aa9.91□□□□□ -0.82
GPC1-206ENST00000455111 A0A0J9YXV3 536 aa9.91□□□□□ -0.82
GPC1-206ENST00000455111 SYCNQ0VAF6 134 aa9.91□□□□□ -0.82
GPC1-206ENST00000455111 TMEM101Q96IK0 257 aa9.91□□□□□ -0.82
GPC1-206ENST00000455111 BTF3L4Q96K17 158 aa9.91□□□□□ -0.82
GPC1-206ENST00000455111 LPAP08519 4548 aa9.91□□□□□ -0.82
GPC1-206ENST00000455111 C7orf77A4D0Y5 90 aa9.9□□□□□ -0.82
GPC1-206ENST00000455111 PTTG1IPP53801 180 aa9.9□□□□□ -0.82
GPC1-206ENST00000455111 AKAP14Q86UN6 197 aa9.9□□□□□ -0.82
GPC1-206ENST00000455111 ISOC2Q96AB3 205 aa9.9□□□□□ -0.82
GPC1-206ENST00000455111 ZNF727A8MUV8 499 aa9.89□□□□□ -0.83
GPC1-206ENST00000455111 SS18Q15532 418 aa9.89□□□□□ -0.83
GPC1-206ENST00000455111 Q6ZUT4 128 aa9.89□□□□□ -0.83
GPC1-206ENST00000455111 CAMPP49913 170 aa9.88□□□□□ -0.83
GPC1-206ENST00000455111 RPL23P62829 140 aaKnown RBP9.88□□□□□ -0.83
GPC1-206ENST00000455111 MRPL51Q4U2R6 128 aaKnown RBP9.88□□□□□ -0.83
GPC1-206ENST00000455111 SPINK6Q6UWN8 80 aa9.88□□□□□ -0.83
GPC1-206ENST00000455111 EIF5A2Q9GZV4 153 aaKnown RBP9.88□□□□□ -0.83
GPC1-206ENST00000455111 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.87□□□□□ -0.83
GPC1-206ENST00000455111 SUMO2P61956 95 aaKnown RBP9.87□□□□□ -0.83
GPC1-206ENST00000455111 SRSF3P84103 164 aaKnown RBP9.87□□□□□ -0.83
GPC1-206ENST00000455111 BORCS7Q96B45 105 aa9.87□□□□□ -0.83
GPC1-206ENST00000455111 CSDC2Q9Y534 153 aaKnown RBP9.87□□□□□ -0.83
GPC1-206ENST00000455111 ZNF561-AS1K7EIQ3 104 aa9.86□□□□□ -0.83
GPC1-206ENST00000455111 VCYO14598 125 aa9.86□□□□□ -0.83
GPC1-206ENST00000455111 GAGE2BQ13066 116 aa9.86□□□□□ -0.83
GPC1-206ENST00000455111 C5orf38Q86SI9 138 aa9.86□□□□□ -0.83
GPC1-206ENST00000455111 FAM104BQ5XKR9 115 aa9.85□□□□□ -0.83
GPC1-206ENST00000455111 KRTAP11-1Q8IUC1 163 aa9.85□□□□□ -0.83
GPC1-206ENST00000455111 OPRPNQ99935 248 aaPredicted RBP9.85□□□□□ -0.83
GPC1-206ENST00000455111 LINC00474Q9P2X8 69 aa9.85□□□□□ -0.83
GPC1-206ENST00000455111 TRAV13-1A0A0B4J241 112 aa9.84□□□□□ -0.83
GPC1-206ENST00000455111 C1orf196B1AJZ1 125 aa9.84□□□□□ -0.83
GPC1-206ENST00000455111 COX7A2LO14548 114 aa9.84□□□□□ -0.83
GPC1-206ENST00000455111 RPL39P62891 51 aaKnown RBP9.84□□□□□ -0.83
GPC1-206ENST00000455111 RIGQ13278 110 aa9.84□□□□□ -0.83
GPC1-206ENST00000455111 Q6ZRP5 223 aa9.84□□□□□ -0.83
GPC1-206ENST00000455111 LOC107984640A0A0U1RRK4 108 aa9.83□□□□□ -0.84
GPC1-206ENST00000455111 A0A1B0GVG6 124 aa9.83□□□□□ -0.84
GPC1-206ENST00000455111 SMIM27A0A1W2PRY6 76 aa9.83□□□□□ -0.84
GPC1-206ENST00000455111 FAM74A3Q4VXF1 159 aa9.83□□□□□ -0.84
GPC1-206ENST00000455111 FCER1GP30273 86 aa9.82□□□□□ -0.84
GPC1-206ENST00000455111 C9orf116Q5BN46 136 aaPredicted RBP9.82□□□□□ -0.84
GPC1-206ENST00000455111 PHF5AQ7RTV0 110 aaKnown RBP9.82□□□□□ -0.84
GPC1-206ENST00000455111 KRTAP7-1Q8IUC3 87 aa9.82□□□□□ -0.84
GPC1-206ENST00000455111 CAMK2N2Q96S95 79 aa9.82□□□□□ -0.84
GPC1-206ENST00000455111 TIMM21Q9BVV7 248 aa9.82□□□□□ -0.84
GPC1-206ENST00000455111 NAT8BQ9UHF3 227 aa9.82□□□□□ -0.84
GPC1-206ENST00000455111 PSORS1C2Q9UIG4 136 aa9.82□□□□□ -0.84
GPC1-206ENST00000455111 TRBV24-1A0A075B6N3 115 aa9.81□□□□□ -0.84
GPC1-206ENST00000455111 APOMO95445 188 aa9.81□□□□□ -0.84
GPC1-206ENST00000455111 TMEM241Q24JQ0 296 aa9.81□□□□□ -0.84
GPC1-206ENST00000455111 C10orf25Q5T742 122 aa9.81□□□□□ -0.84
GPC1-206ENST00000455111 C2orf48Q96LS8 159 aa9.81□□□□□ -0.84
GPC1-206ENST00000455111 MALP21145 153 aa9.8□□□□□ -0.84
GPC1-206ENST00000455111 RPL32P62910 135 aaKnown RBP9.8□□□□□ -0.84
GPC1-206ENST00000455111 IGHV3OR16-9A0A0B4J2B5 98 aa9.79□□□□□ -0.84
GPC1-206ENST00000455111 A0A1B0GXF2 115 aa9.79□□□□□ -0.84
GPC1-206ENST00000455111 FAM168BA1KXE4 195 aa9.79□□□□□ -0.84
GPC1-206ENST00000455111 TNFRSF6BO95407 300 aa9.79□□□□□ -0.84
GPC1-206ENST00000455111 NPYP01303 97 aa9.79□□□□□ -0.84
GPC1-206ENST00000455111 SPAG11BQ08648 103 aa9.79□□□□□ -0.84
GPC1-206ENST00000455111 ADIRFQ15847 76 aa9.79□□□□□ -0.84
GPC1-206ENST00000455111 KIR2DL4Q99706 377 aa9.79□□□□□ -0.84
GPC1-206ENST00000455111 REG3GQ6UW15 175 aa9.78□□□□□ -0.84
GPC1-206ENST00000455111 C20orf78Q9BR46 151 aa9.78□□□□□ -0.84
GPC1-206ENST00000455111 SMIM2Q9BVW6 85 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms