RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 CTRLP40313 264 aa5.03□□□□□ -1.6
NIF3L1-209ENST00000454952 TWIST1Q15672 202 aa5.03□□□□□ -1.6
NIF3L1-209ENST00000454952 HIGD2BQ4VC39 106 aa5.03□□□□□ -1.6
NIF3L1-209ENST00000454952 RNASEKQ6P5S7 137 aaKnown RBP5.03□□□□□ -1.6
NIF3L1-209ENST00000454952 LYZL1Q6UWQ5 148 aa5.03□□□□□ -1.6
NIF3L1-209ENST00000454952 Q6ZRP5 223 aa5.03□□□□□ -1.6
NIF3L1-209ENST00000454952 PRSS3P2Q8NHM4 247 aa5.03□□□□□ -1.6
NIF3L1-209ENST00000454952 TMEM101Q96IK0 257 aa5.03□□□□□ -1.6
NIF3L1-209ENST00000454952 BTF3L4Q96K17 158 aa5.03□□□□□ -1.6
NIF3L1-209ENST00000454952 CNFNQ9BYD5 112 aa5.03□□□□□ -1.6
NIF3L1-209ENST00000454952 IGHV1-58A0A0C4DH39 117 aa5.02□□□□□ -1.61
NIF3L1-209ENST00000454952 TAGLN2P37802 199 aaKnown RBP5.02□□□□□ -1.61
NIF3L1-209ENST00000454952 MEF2BQ02080 365 aaPredicted RBP5.02□□□□□ -1.61
NIF3L1-209ENST00000454952 RGS21Q2M5E4 152 aa5.02□□□□□ -1.61
NIF3L1-209ENST00000454952 OR5A1Q8NGJ0 315 aa5.02□□□□□ -1.61
NIF3L1-209ENST00000454952 LYPD6BQ8NI32 183 aa5.02□□□□□ -1.61
NIF3L1-209ENST00000454952 CARD19Q96LW7 228 aa5.02□□□□□ -1.61
NIF3L1-209ENST00000454952 A0A096LNI7 61 aa5.01□□□□□ -1.61
NIF3L1-209ENST00000454952 FGF6P10767 208 aa5.01□□□□□ -1.61
NIF3L1-209ENST00000454952 FOXI1Q12951 378 aa5.01□□□□□ -1.61
NIF3L1-209ENST00000454952 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
NIF3L1-209ENST00000454952 GATD1Q8NB37 220 aa5.01□□□□□ -1.61
NIF3L1-209ENST00000454952 ISOC2Q96AB3 205 aa5.01□□□□□ -1.61
NIF3L1-209ENST00000454952 MED9Q9NWA0 146 aa5.01□□□□□ -1.61
NIF3L1-209ENST00000454952 RAB19A4D1S5 217 aa5□□□□□ -1.61
NIF3L1-209ENST00000454952 I3L3M4 83 aa5□□□□□ -1.61
NIF3L1-209ENST00000454952 XCL1P47992 114 aa5□□□□□ -1.61
NIF3L1-209ENST00000454952 KRTAP10-8P60410 259 aa5□□□□□ -1.61
NIF3L1-209ENST00000454952 SS18Q15532 418 aa5□□□□□ -1.61
NIF3L1-209ENST00000454952 Q6ZNX1 250 aa5□□□□□ -1.61
NIF3L1-209ENST00000454952 RPP21Q9H633 154 aaKnown RBP5□□□□□ -1.61
NIF3L1-209ENST00000454952 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.99□□□□□ -1.61
NIF3L1-209ENST00000454952 IGKV2-29A2NJV5 120 aaPredicted RBP4.99□□□□□ -1.61
NIF3L1-209ENST00000454952 FAM231BA6NCW3 169 aa4.99□□□□□ -1.61
NIF3L1-209ENST00000454952 SDHAF1A6NFY7 115 aa4.99□□□□□ -1.61
NIF3L1-209ENST00000454952 SMLR1H3BR10 107 aa4.99□□□□□ -1.61
NIF3L1-209ENST00000454952 CCL25O15444 150 aa4.99□□□□□ -1.61
NIF3L1-209ENST00000454952 BCL2P10415 239 aa4.99□□□□□ -1.61
NIF3L1-209ENST00000454952 PMCHP20382 165 aa4.99□□□□□ -1.61
NIF3L1-209ENST00000454952 SYCNQ0VAF6 134 aa4.99□□□□□ -1.61
NIF3L1-209ENST00000454952 SMAGPQ0VAQ4 97 aa4.99□□□□□ -1.61
NIF3L1-209ENST00000454952 KRTAP5-3Q6L8H2 238 aa4.99□□□□□ -1.61
NIF3L1-209ENST00000454952 CD164L2Q6UWJ8 174 aa4.99□□□□□ -1.61
NIF3L1-209ENST00000454952 MRAP2Q96G30 205 aa4.99□□□□□ -1.61
NIF3L1-209ENST00000454952 TRBV20OR9-2A0A075B6H5 130 aa4.98□□□□□ -1.61
NIF3L1-209ENST00000454952 TRAV26-2A0A0B4J265 109 aa4.98□□□□□ -1.61
NIF3L1-209ENST00000454952 TRBV6-5A0A0K0K1A5 114 aa4.98□□□□□ -1.61
NIF3L1-209ENST00000454952 LOC107984640A0A0U1RRK4 108 aa4.98□□□□□ -1.61
NIF3L1-209ENST00000454952 LINC00959A0A1B0GUT2 108 aa4.98□□□□□ -1.61
NIF3L1-209ENST00000454952 SRSF9Q13242 221 aaKnown RBP eCLIP4.98□□□□□ -1.61
NIF3L1-209ENST00000454952 ZNF664Q8N3J9 261 aa4.98□□□□□ -1.61
NIF3L1-209ENST00000454952 BORCS7Q96B45 105 aa4.98□□□□□ -1.61
NIF3L1-209ENST00000454952 RPL39LQ96EH5 51 aaKnown RBP4.98□□□□□ -1.61
NIF3L1-209ENST00000454952 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
NIF3L1-209ENST00000454952 A8MWL6 223 aa4.97□□□□□ -1.61
NIF3L1-209ENST00000454952 CAMPP49913 170 aa4.97□□□□□ -1.61
NIF3L1-209ENST00000454952 MRPL52Q86TS9 123 aaKnown RBP4.97□□□□□ -1.61
NIF3L1-209ENST00000454952 ST20Q9HBF5 79 aa4.97□□□□□ -1.61
NIF3L1-209ENST00000454952 LRP2P98164 4655 aa4.96□□□□□ -1.62
NIF3L1-209ENST00000454952 IGLV4-69A0A075B6H9 119 aa4.96□□□□□ -1.62
NIF3L1-209ENST00000454952 KRTAP9-7A8MTY7 169 aa4.96□□□□□ -1.62
NIF3L1-209ENST00000454952 C1orf196B1AJZ1 125 aa4.96□□□□□ -1.62
NIF3L1-209ENST00000454952 COX7A2LO14548 114 aa4.96□□□□□ -1.62
NIF3L1-209ENST00000454952 APOMO95445 188 aa4.96□□□□□ -1.62
NIF3L1-209ENST00000454952 PPP1R17O96001 155 aa4.96□□□□□ -1.62
NIF3L1-209ENST00000454952 MT-ND6P03923 174 aa4.96□□□□□ -1.62
NIF3L1-209ENST00000454952 ESDP10768 282 aa4.96□□□□□ -1.62
NIF3L1-209ENST00000454952 GAGE2BQ13066 116 aa4.96□□□□□ -1.62
NIF3L1-209ENST00000454952 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
NIF3L1-209ENST00000454952 TSKUQ8WUA8 353 aa4.96□□□□□ -1.62
NIF3L1-209ENST00000454952 RNASE7Q9H1E1 156 aaKnown RBP4.96□□□□□ -1.62
NIF3L1-209ENST00000454952 CDC42SE2Q9NRR3 84 aa4.96□□□□□ -1.62
NIF3L1-209ENST00000454952 TRBV27A0A0K0K1C4 114 aa4.95□□□□□ -1.62
NIF3L1-209ENST00000454952 C7orf77A4D0Y5 90 aa4.95□□□□□ -1.62
NIF3L1-209ENST00000454952 GATCO43716 136 aaKnown RBP4.95□□□□□ -1.62
NIF3L1-209ENST00000454952 TSHBP01222 138 aa4.95□□□□□ -1.62
NIF3L1-209ENST00000454952 OCC1Q8TAD7 63 aa4.95□□□□□ -1.62
NIF3L1-209ENST00000454952 C2orf48Q96LS8 159 aa4.95□□□□□ -1.62
NIF3L1-209ENST00000454952 CAMK2N2Q96S95 79 aa4.95□□□□□ -1.62
NIF3L1-209ENST00000454952 PSORS1C2Q9UIG4 136 aa4.95□□□□□ -1.62
NIF3L1-209ENST00000454952 CSDC2Q9Y534 153 aaKnown RBP4.95□□□□□ -1.62
NIF3L1-209ENST00000454952 TNXBP22105 4242 aa4.95□□□□□ -1.62
NIF3L1-209ENST00000454952 F8WDY8 70 aa4.94□□□□□ -1.62
NIF3L1-209ENST00000454952 TMEM250H0YL14 139 aa4.94□□□□□ -1.62
NIF3L1-209ENST00000454952 GAS8-AS1O95177 125 aa4.94□□□□□ -1.62
NIF3L1-209ENST00000454952 FCER1GP30273 86 aa4.94□□□□□ -1.62
NIF3L1-209ENST00000454952 FOXA3P55318 350 aaPredicted RBP4.94□□□□□ -1.62
NIF3L1-209ENST00000454952 FAM231DQ6ZW35 169 aa4.94□□□□□ -1.62
NIF3L1-209ENST00000454952 DIRC1Q969H9 104 aa4.94□□□□□ -1.62
NIF3L1-209ENST00000454952 TMEM18Q96B42 140 aa4.94□□□□□ -1.62
NIF3L1-209ENST00000454952 LINC00526Q96FQ7 95 aa4.94□□□□□ -1.62
NIF3L1-209ENST00000454952 TMEM242Q9NWH2 141 aa4.94□□□□□ -1.62
NIF3L1-209ENST00000454952 A0A1B0GUT8 65 aa4.93□□□□□ -1.62
NIF3L1-209ENST00000454952 K7EN84 100 aa4.93□□□□□ -1.62
NIF3L1-209ENST00000454952 VCYO14598 125 aa4.93□□□□□ -1.62
NIF3L1-209ENST00000454952 POLR2KP53803 58 aaKnown RBP4.93□□□□□ -1.62
NIF3L1-209ENST00000454952 SLC51BQ86UW2 128 aa4.93□□□□□ -1.62
NIF3L1-209ENST00000454952 NUP35Q8NFH5 326 aa4.93□□□□□ -1.62
NIF3L1-209ENST00000454952 KIR2DL4Q99706 377 aa4.93□□□□□ -1.62
NIF3L1-209ENST00000454952 TMEM191AQ9H0A3 160 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms