RNA–Protein interactions for RNA: ENST00000454444.1

AC007879.2-201, humanhuman

TSL 4 BASIC

Gene AC007879.2, Length 551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.2-201ENST00000454444 LINC00526Q96FQ7 95 aa4.9□□□□□ -1.63
AC007879.2-201ENST00000454444 FAM210AQ96ND0 272 aa4.9□□□□□ -1.63
AC007879.2-201ENST00000454444 TRBV20OR9-2A0A075B6H5 130 aa4.89□□□□□ -1.63
AC007879.2-201ENST00000454444 LOC107984640A0A0U1RRK4 108 aa4.89□□□□□ -1.63
AC007879.2-201ENST00000454444 FAM231BA6NCW3 169 aa4.89□□□□□ -1.63
AC007879.2-201ENST00000454444 FCER1GP30273 86 aa4.89□□□□□ -1.63
AC007879.2-201ENST00000454444 CAMPP49913 170 aa4.89□□□□□ -1.63
AC007879.2-201ENST00000454444 CEBPGP53567 150 aa4.89□□□□□ -1.63
AC007879.2-201ENST00000454444 FOXA3P55318 350 aaPredicted RBP4.89□□□□□ -1.63
AC007879.2-201ENST00000454444 ODF1Q14990 250 aa4.89□□□□□ -1.63
AC007879.2-201ENST00000454444 ZNF664Q8N3J9 261 aa4.89□□□□□ -1.63
AC007879.2-201ENST00000454444 C7orf77A4D0Y5 90 aa4.88□□□□□ -1.63
AC007879.2-201ENST00000454444 C1orf196B1AJZ1 125 aa4.88□□□□□ -1.63
AC007879.2-201ENST00000454444 COX7A2LO14548 114 aa4.88□□□□□ -1.63
AC007879.2-201ENST00000454444 MT-ND6P03923 174 aa4.88□□□□□ -1.63
AC007879.2-201ENST00000454444 SLC51BQ86UW2 128 aa4.88□□□□□ -1.63
AC007879.2-201ENST00000454444 CAMK2N2Q96S95 79 aa4.88□□□□□ -1.63
AC007879.2-201ENST00000454444 TMEM242Q9NWH2 141 aa4.88□□□□□ -1.63
AC007879.2-201ENST00000454444 UBR4Q5T4S7 5183 aa4.88□□□□□ -1.63
AC007879.2-201ENST00000454444 IGLV4-69A0A075B6H9 119 aa4.87□□□□□ -1.63
AC007879.2-201ENST00000454444 TRBV6-5A0A0K0K1A5 114 aa4.87□□□□□ -1.63
AC007879.2-201ENST00000454444 K7EN84 100 aa4.87□□□□□ -1.63
AC007879.2-201ENST00000454444 VCYO14598 125 aa4.87□□□□□ -1.63
AC007879.2-201ENST00000454444 APOMO95445 188 aa4.87□□□□□ -1.63
AC007879.2-201ENST00000454444 PPP1R17O96001 155 aa4.87□□□□□ -1.63
AC007879.2-201ENST00000454444 PTTG1IPP53801 180 aa4.87□□□□□ -1.63
AC007879.2-201ENST00000454444 RPL18AQ02543 176 aaKnown RBP4.87□□□□□ -1.63
AC007879.2-201ENST00000454444 TMEM18Q96B42 140 aa4.87□□□□□ -1.63
AC007879.2-201ENST00000454444 KIR2DL4Q99706 377 aa4.87□□□□□ -1.63
AC007879.2-201ENST00000454444 CDC42SE2Q9NRR3 84 aa4.87□□□□□ -1.63
AC007879.2-201ENST00000454444 HMCN2Q8NDA2 5059 aa4.87□□□□□ -1.63
AC007879.2-201ENST00000454444 FAT3Q8TDW7 4589 aa4.87□□□□□ -1.63
AC007879.2-201ENST00000454444 TRAV13-1A0A0B4J241 112 aa4.86□□□□□ -1.63
AC007879.2-201ENST00000454444 A0A1B0GUT8 65 aa4.86□□□□□ -1.63
AC007879.2-201ENST00000454444 TSHBP01222 138 aa4.86□□□□□ -1.63
AC007879.2-201ENST00000454444 ESDP10768 282 aa4.86□□□□□ -1.63
AC007879.2-201ENST00000454444 KRTAP10-8P60410 259 aa4.86□□□□□ -1.63
AC007879.2-201ENST00000454444 SRSF9Q13242 221 aaKnown RBP eCLIP4.86□□□□□ -1.63
AC007879.2-201ENST00000454444 MRPL52Q86TS9 123 aaKnown RBP4.86□□□□□ -1.63
AC007879.2-201ENST00000454444 HIGD1CA8MV81 97 aa4.85□□□□□ -1.63
AC007879.2-201ENST00000454444 TMEM250H0YL14 139 aa4.85□□□□□ -1.63
AC007879.2-201ENST00000454444 BLOC1S1P78537 153 aa4.85□□□□□ -1.63
AC007879.2-201ENST00000454444 RIGQ13278 110 aa4.85□□□□□ -1.63
AC007879.2-201ENST00000454444 C9orf116Q5BN46 136 aaPredicted RBP4.85□□□□□ -1.63
AC007879.2-201ENST00000454444 CT83Q5H943 113 aa4.85□□□□□ -1.63
AC007879.2-201ENST00000454444 C1orf137Q5JT78 98 aa4.85□□□□□ -1.63
AC007879.2-201ENST00000454444 FAM231DQ6ZW35 169 aa4.85□□□□□ -1.63
AC007879.2-201ENST00000454444 TSKUQ8WUA8 353 aa4.85□□□□□ -1.63
AC007879.2-201ENST00000454444 TMEM191AQ9H0A3 160 aa4.85□□□□□ -1.63
AC007879.2-201ENST00000454444 TRBV27A0A0K0K1C4 114 aa4.84□□□□□ -1.63
AC007879.2-201ENST00000454444 POLR2KP53803 58 aaKnown RBP4.84□□□□□ -1.63
AC007879.2-201ENST00000454444 C5orf38Q86SI9 138 aa4.84□□□□□ -1.63
AC007879.2-201ENST00000454444 NUP35Q8NFH5 326 aa4.84□□□□□ -1.63
AC007879.2-201ENST00000454444 C2orf48Q96LS8 159 aa4.84□□□□□ -1.63
AC007879.2-201ENST00000454444 IMMP2LQ96T52 175 aa4.84□□□□□ -1.63
AC007879.2-201ENST00000454444 SMIM7Q9BQ49 75 aa4.84□□□□□ -1.63
AC007879.2-201ENST00000454444 EIF5A2Q9GZV4 153 aaKnown RBP4.84□□□□□ -1.63
AC007879.2-201ENST00000454444 A0A087WZ39 114 aa4.83□□□□□ -1.64
AC007879.2-201ENST00000454444 A0A1W2PNN7 141 aa4.83□□□□□ -1.64
AC007879.2-201ENST00000454444 PPP1R2P9O14990 202 aa4.83□□□□□ -1.64
AC007879.2-201ENST00000454444 GAS8-AS1O95177 125 aa4.83□□□□□ -1.64
AC007879.2-201ENST00000454444 RAB4AP20338 218 aa4.83□□□□□ -1.64
AC007879.2-201ENST00000454444 SUMO2P61956 95 aaKnown RBP4.83□□□□□ -1.64
AC007879.2-201ENST00000454444 SPAG11BQ08648 103 aa4.83□□□□□ -1.64
AC007879.2-201ENST00000454444 RNASE13Q5GAN3 156 aaKnown RBP4.83□□□□□ -1.64
AC007879.2-201ENST00000454444 AMN1Q8IY45 258 aa4.83□□□□□ -1.64
AC007879.2-201ENST00000454444 DIRC1Q969H9 104 aa4.83□□□□□ -1.64
AC007879.2-201ENST00000454444 OPRPNQ99935 248 aaPredicted RBP4.83□□□□□ -1.64
AC007879.2-201ENST00000454444 PSORS1C2Q9UIG4 136 aa4.83□□□□□ -1.64
AC007879.2-201ENST00000454444 CSDC2Q9Y534 153 aaKnown RBP4.83□□□□□ -1.64
AC007879.2-201ENST00000454444 ZNF727A8MUV8 499 aa4.82□□□□□ -1.64
AC007879.2-201ENST00000454444 SMKR1H3BMG3 65 aa4.82□□□□□ -1.64
AC007879.2-201ENST00000454444 TCAPO15273 167 aa4.82□□□□□ -1.64
AC007879.2-201ENST00000454444 TCTE3Q8IZS6 198 aa4.82□□□□□ -1.64
AC007879.2-201ENST00000454444 UBE2D4Q9Y2X8 147 aa4.82□□□□□ -1.64
AC007879.2-201ENST00000454444 F8WDY8 70 aa4.81□□□□□ -1.64
AC007879.2-201ENST00000454444 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.81□□□□□ -1.64
AC007879.2-201ENST00000454444 NDUFA1O15239 70 aa4.81□□□□□ -1.64
AC007879.2-201ENST00000454444 TMEM241Q24JQ0 296 aa4.81□□□□□ -1.64
AC007879.2-201ENST00000454444 RNF151Q2KHN1 245 aa4.81□□□□□ -1.64
AC007879.2-201ENST00000454444 ALKAL2Q6UX46 152 aa4.81□□□□□ -1.64
AC007879.2-201ENST00000454444 PHF5AQ7RTV0 110 aaKnown RBP4.81□□□□□ -1.64
AC007879.2-201ENST00000454444 LINC01551Q86U37 167 aa4.81□□□□□ -1.64
AC007879.2-201ENST00000454444 OR10D4PQ8NGN7 298 aa4.81□□□□□ -1.64
AC007879.2-201ENST00000454444 ORAOV1Q8WV07 137 aa4.81□□□□□ -1.64
AC007879.2-201ENST00000454444 OSTCQ9NRP0 149 aa4.81□□□□□ -1.64
AC007879.2-201ENST00000454444 NAT8BQ9UHF3 227 aa4.81□□□□□ -1.64
AC007879.2-201ENST00000454444 PKHD1L1Q86WI1 4243 aa4.81□□□□□ -1.64
AC007879.2-201ENST00000454444 IGLV7-43P04211 117 aa4.8□□□□□ -1.64
AC007879.2-201ENST00000454444 CKS2P33552 79 aa4.8□□□□□ -1.64
AC007879.2-201ENST00000454444 UBE2D1P51668 147 aa4.8□□□□□ -1.64
AC007879.2-201ENST00000454444 UBE2BP63146 152 aa4.8□□□□□ -1.64
AC007879.2-201ENST00000454444 GAGE2EQ4V326 116 aa4.8□□□□□ -1.64
AC007879.2-201ENST00000454444 Q6ZUT4 128 aa4.8□□□□□ -1.64
AC007879.2-201ENST00000454444 TIMM21Q9BVV7 248 aa4.8□□□□□ -1.64
AC007879.2-201ENST00000454444 MRPL35Q9NZE8 188 aaKnown RBP4.8□□□□□ -1.64
AC007879.2-201ENST00000454444 GAGE2DQ9UEU5 116 aa4.8□□□□□ -1.64
AC007879.2-201ENST00000454444 TGIF2-C20orf24A0A0A6YYL0 155 aa4.79□□□□□ -1.64
AC007879.2-201ENST00000454444 LINC00862A6NCI5 91 aa4.79□□□□□ -1.64
AC007879.2-201ENST00000454444 HBBP68871 147 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms