RNA–Protein interactions for RNA: ENST00000453933.5

HMG20B-206, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-206ENST00000453933 SS18Q15532 418 aa13.41□□□□□ -0.26
HMG20B-206ENST00000453933 OCC1Q8TAD7 63 aa13.41□□□□□ -0.26
HMG20B-206ENST00000453933 MRAP2Q96G30 205 aa13.39□□□□□ -0.27
HMG20B-206ENST00000453933 TRBV6-5A0A0K0K1A5 114 aa13.38□□□□□ -0.27
HMG20B-206ENST00000453933 ESDP10768 282 aa13.38□□□□□ -0.27
HMG20B-206ENST00000453933 TAGLN2P37802 199 aaKnown RBP13.38□□□□□ -0.27
HMG20B-206ENST00000453933 GAGE2BQ13066 116 aa13.38□□□□□ -0.27
HMG20B-206ENST00000453933 CD164L2Q6UWJ8 174 aa13.38□□□□□ -0.27
HMG20B-206ENST00000453933 TMEM242Q9NWH2 141 aa13.38□□□□□ -0.27
HMG20B-206ENST00000453933 GATCO43716 136 aaKnown RBP13.37□□□□□ -0.27
HMG20B-206ENST00000453933 ST20Q9HBF5 79 aa13.37□□□□□ -0.27
HMG20B-206ENST00000453933 TSHBP01222 138 aa13.36□□□□□ -0.27
HMG20B-206ENST00000453933 CAMPP49913 170 aa13.36□□□□□ -0.27
HMG20B-206ENST00000453933 PTTG1IPP53801 180 aa13.36□□□□□ -0.27
HMG20B-206ENST00000453933 ISOC2Q96AB3 205 aa13.36□□□□□ -0.27
HMG20B-206ENST00000453933 CDC42SE2Q9NRR3 84 aa13.36□□□□□ -0.27
HMG20B-206ENST00000453933 MUC2Q02817 5179 aa13.35□□□□□ -0.27
HMG20B-206ENST00000453933 LOC107984640A0A0U1RRK4 108 aa13.35□□□□□ -0.27
HMG20B-206ENST00000453933 ZNF664Q8N3J9 261 aa13.35□□□□□ -0.27
HMG20B-206ENST00000453933 A8MWL6 223 aa13.34□□□□□ -0.27
HMG20B-206ENST00000453933 MRPL52Q86TS9 123 aaKnown RBP13.34□□□□□ -0.27
HMG20B-206ENST00000453933 BORCS7Q96B45 105 aa13.34□□□□□ -0.27
HMG20B-206ENST00000453933 FAM210AQ96ND0 272 aa13.34□□□□□ -0.27
HMG20B-206ENST00000453933 IGLV4-69A0A075B6H9 119 aa13.33□□□□□ -0.28
HMG20B-206ENST00000453933 MALP21145 153 aa13.33□□□□□ -0.28
HMG20B-206ENST00000453933 C7orf77A4D0Y5 90 aa13.32□□□□□ -0.28
HMG20B-206ENST00000453933 A0A1W2PNN7 141 aa13.31□□□□□ -0.28
HMG20B-206ENST00000453933 FAM231DQ6ZW35 169 aa13.31□□□□□ -0.28
HMG20B-206ENST00000453933 COX7A2LO14548 114 aa13.3□□□□□ -0.28
HMG20B-206ENST00000453933 POLR2KP53803 58 aaKnown RBP13.3□□□□□ -0.28
HMG20B-206ENST00000453933 CAMK2N2Q96S95 79 aa13.3□□□□□ -0.28
HMG20B-206ENST00000453933 C1orf196B1AJZ1 125 aa13.29□□□□□ -0.28
HMG20B-206ENST00000453933 SLC51BQ86UW2 128 aa13.29□□□□□ -0.28
HMG20B-206ENST00000453933 NUP35Q8NFH5 326 aa13.29□□□□□ -0.28
HMG20B-206ENST00000453933 TRBV27A0A0K0K1C4 114 aa13.28□□□□□ -0.28
HMG20B-206ENST00000453933 APOMO95445 188 aa13.28□□□□□ -0.28
HMG20B-206ENST00000453933 MT-ND6P03923 174 aa13.28□□□□□ -0.28
HMG20B-206ENST00000453933 CT83Q5H943 113 aa13.28□□□□□ -0.28
HMG20B-206ENST00000453933 PRR26Q8N8Z3 221 aa13.28□□□□□ -0.28
HMG20B-206ENST00000453933 TMEM191AQ9H0A3 160 aa13.28□□□□□ -0.28
HMG20B-206ENST00000453933 PSORS1C2Q9UIG4 136 aa13.28□□□□□ -0.28
HMG20B-206ENST00000453933 TMEM250H0YL14 139 aa13.27□□□□□ -0.29
HMG20B-206ENST00000453933 FCER1GP30273 86 aa13.27□□□□□ -0.29
HMG20B-206ENST00000453933 C9orf116Q5BN46 136 aaPredicted RBP13.27□□□□□ -0.29
HMG20B-206ENST00000453933 A0A1B0GUT8 65 aa13.26□□□□□ -0.29
HMG20B-206ENST00000453933 RAB4AP20338 218 aa13.26□□□□□ -0.29
HMG20B-206ENST00000453933 CEBPGP53567 150 aa13.26□□□□□ -0.29
HMG20B-206ENST00000453933 RPL18AQ02543 176 aaKnown RBP13.26□□□□□ -0.29
HMG20B-206ENST00000453933 TRAV13-1A0A0B4J241 112 aa13.25□□□□□ -0.29
HMG20B-206ENST00000453933 HIGD1CA8MV81 97 aa13.25□□□□□ -0.29
HMG20B-206ENST00000453933 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.25□□□□□ -0.29
HMG20B-206ENST00000453933 VCYO14598 125 aa13.25□□□□□ -0.29
HMG20B-206ENST00000453933 SMAGPQ0VAQ4 97 aa13.25□□□□□ -0.29
HMG20B-206ENST00000453933 RNASE13Q5GAN3 156 aaKnown RBP13.25□□□□□ -0.29
HMG20B-206ENST00000453933 C1orf137Q5JT78 98 aa13.25□□□□□ -0.29
HMG20B-206ENST00000453933 AMN1Q8IY45 258 aa13.25□□□□□ -0.29
HMG20B-206ENST00000453933 C5orf38Q86SI9 138 aa13.24□□□□□ -0.29
HMG20B-206ENST00000453933 TSKUQ8WUA8 353 aa13.24□□□□□ -0.29
HMG20B-206ENST00000453933 C2orf48Q96LS8 159 aa13.24□□□□□ -0.29
HMG20B-206ENST00000453933 CSDC2Q9Y534 153 aaKnown RBP13.24□□□□□ -0.29
HMG20B-206ENST00000453933 PHF5AQ7RTV0 110 aaKnown RBP13.23□□□□□ -0.29
HMG20B-206ENST00000453933 UBE2D4Q9Y2X8 147 aa13.23□□□□□ -0.29
HMG20B-206ENST00000453933 SMKR1H3BMG3 65 aa13.22□□□□□ -0.29
HMG20B-206ENST00000453933 OPRPNQ99935 248 aaPredicted RBP13.22□□□□□ -0.29
HMG20B-206ENST00000453933 KIR2DL4Q99706 377 aa13.21□□□□□ -0.29
HMG20B-206ENST00000453933 PPP1R17O96001 155 aa13.2□□□□□ -0.3
HMG20B-206ENST00000453933 SPAG11BQ08648 103 aa13.2□□□□□ -0.3
HMG20B-206ENST00000453933 TCTE3Q8IZS6 198 aa13.2□□□□□ -0.3
HMG20B-206ENST00000453933 SUMO2P61956 95 aaKnown RBP13.19□□□□□ -0.3
HMG20B-206ENST00000453933 BLOC1S1P78537 153 aa13.19□□□□□ -0.3
HMG20B-206ENST00000453933 RIGQ13278 110 aa13.18□□□□□ -0.3
HMG20B-206ENST00000453933 RNF151Q2KHN1 245 aa13.18□□□□□ -0.3
HMG20B-206ENST00000453933 Q6ZUT4 128 aa13.18□□□□□ -0.3
HMG20B-206ENST00000453933 LINC01551Q86U37 167 aa13.18□□□□□ -0.3
HMG20B-206ENST00000453933 TMEM18Q96B42 140 aa13.18□□□□□ -0.3
HMG20B-206ENST00000453933 SMIM7Q9BQ49 75 aa13.18□□□□□ -0.3
HMG20B-206ENST00000453933 A0A0U1RQV1 116 aa13.17□□□□□ -0.3
HMG20B-206ENST00000453933 KRTAP9-6A0A140TA67 174 aa13.17□□□□□ -0.3
HMG20B-206ENST00000453933 NRACQ8N912 160 aa13.17□□□□□ -0.3
HMG20B-206ENST00000453933 DIRC1Q969H9 104 aa13.17□□□□□ -0.3
HMG20B-206ENST00000453933 IGLV7-43P04211 117 aa13.16□□□□□ -0.3
HMG20B-206ENST00000453933 PRR4Q16378 134 aa13.16□□□□□ -0.3
HMG20B-206ENST00000453933 OR10D4PQ8NGN7 298 aa13.16□□□□□ -0.3
HMG20B-206ENST00000453933 OSTCQ9NRP0 149 aa13.16□□□□□ -0.3
HMG20B-206ENST00000453933 A0A087WZ39 114 aa13.15□□□□□ -0.3
HMG20B-206ENST00000453933 ALKAL2Q6UX46 152 aa13.15□□□□□ -0.3
HMG20B-206ENST00000453933 TIMM21Q9BVV7 248 aa13.15□□□□□ -0.3
HMG20B-206ENST00000453933 PPP1R2P9O14990 202 aa13.14□□□□□ -0.31
HMG20B-206ENST00000453933 ORAOV1Q8WV07 137 aa13.14□□□□□ -0.31
HMG20B-206ENST00000453933 IMMP2LQ96T52 175 aa13.14□□□□□ -0.31
HMG20B-206ENST00000453933 EIF5A2Q9GZV4 153 aaKnown RBP13.14□□□□□ -0.31
HMG20B-206ENST00000453933 MRPL35Q9NZE8 188 aaKnown RBP13.14□□□□□ -0.31
HMG20B-206ENST00000453933 ZNF727A8MUV8 499 aa13.13□□□□□ -0.31
HMG20B-206ENST00000453933 hCG_2014768A0A024R1R8 64 aa13.12□□□□□ -0.31
HMG20B-206ENST00000453933 LCE2AQ5TA79 106 aaPredicted RBP13.12□□□□□ -0.31
HMG20B-206ENST00000453933 FAT4Q6V0I7 4981 aa13.11□□□□□ -0.31
HMG20B-206ENST00000453933 FAM168BA1KXE4 195 aa13.11□□□□□ -0.31
HMG20B-206ENST00000453933 H0Y9J4 135 aa13.11□□□□□ -0.31
HMG20B-206ENST00000453933 NDUFA1O15239 70 aa13.11□□□□□ -0.31
HMG20B-206ENST00000453933 MRPL51Q4U2R6 128 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms