RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 A0A0J9YY99 117 aa13.65□□□□□ -0.22
HIGD1A-204ENST00000452906 ZNF25P17030 456 aaPredicted RBP13.65□□□□□ -0.22
HIGD1A-204ENST00000452906 PKIAP61925 76 aa13.65□□□□□ -0.22
HIGD1A-204ENST00000452906 MRPS36P82909 103 aaKnown RBP13.65□□□□□ -0.22
HIGD1A-204ENST00000452906 NTM-AS1Q6ZSK4 140 aa13.65□□□□□ -0.22
HIGD1A-204ENST00000452906 Q6ZTC4 211 aa13.65□□□□□ -0.22
HIGD1A-204ENST00000452906 TMEM101Q96IK0 257 aa13.65□□□□□ -0.22
HIGD1A-204ENST00000452906 VCX2Q9H322 139 aa13.65□□□□□ -0.22
HIGD1A-204ENST00000452906 CHTOPQ9Y3Y2 248 aaKnown RBP13.65□□□□□ -0.22
HIGD1A-204ENST00000452906 IGLV4-3A0A075B6K6 122 aa13.64□□□□□ -0.23
HIGD1A-204ENST00000452906 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.64□□□□□ -0.23
HIGD1A-204ENST00000452906 IGKV2-29A2NJV5 120 aaPredicted RBP13.64□□□□□ -0.23
HIGD1A-204ENST00000452906 TSTD3H0UI37 97 aa13.64□□□□□ -0.23
HIGD1A-204ENST00000452906 IGKCP01834 107 aa13.64□□□□□ -0.23
HIGD1A-204ENST00000452906 AMMECR1LQ6DCA0 310 aa13.64□□□□□ -0.23
HIGD1A-204ENST00000452906 CDPF1Q6NVV7 123 aa13.64□□□□□ -0.23
HIGD1A-204ENST00000452906 TRAV10A0A0B4J240 114 aa13.63□□□□□ -0.23
HIGD1A-204ENST00000452906 C2orf88Q9BSF0 95 aa13.63□□□□□ -0.23
HIGD1A-204ENST00000452906 DEFB131BA0A096LNP1 70 aa13.62□□□□□ -0.23
HIGD1A-204ENST00000452906 PRSS29PA6NIE9 313 aa13.62□□□□□ -0.23
HIGD1A-204ENST00000452906 FGF6P10767 208 aa13.62□□□□□ -0.23
HIGD1A-204ENST00000452906 ATOH7Q8N100 152 aa13.62□□□□□ -0.23
HIGD1A-204ENST00000452906 CST9LQ9H4G1 147 aa13.62□□□□□ -0.23
HIGD1A-204ENST00000452906 DNAH1Q9P2D7 4330 aa13.62□□□□□ -0.23
HIGD1A-204ENST00000452906 TIRAPP58753 221 aa13.61□□□□□ -0.23
HIGD1A-204ENST00000452906 NANOS2P60321 138 aaKnown RBP13.61□□□□□ -0.23
HIGD1A-204ENST00000452906 OR5A1Q8NGJ0 315 aa13.61□□□□□ -0.23
HIGD1A-204ENST00000452906 CHCHD5Q9BSY4 110 aa13.61□□□□□ -0.23
HIGD1A-204ENST00000452906 MRPL35Q9NZE8 188 aaKnown RBP13.61□□□□□ -0.23
HIGD1A-204ENST00000452906 PAM16Q9Y3D7 125 aa13.61□□□□□ -0.23
HIGD1A-204ENST00000452906 SPATA45Q537H7 98 aa13.6□□□□□ -0.23
HIGD1A-204ENST00000452906 AMELXQ99217 191 aa13.6□□□□□ -0.23
HIGD1A-204ENST00000452906 PMCHL2Q9BQD1 86 aa13.6□□□□□ -0.23
HIGD1A-204ENST00000452906 ZNF664Q8N3J9 261 aa13.58□□□□□ -0.24
HIGD1A-204ENST00000452906 A0A096LPF7 62 aa13.57□□□□□ -0.24
HIGD1A-204ENST00000452906 C15orf53Q8NAA6 179 aa13.57□□□□□ -0.24
HIGD1A-204ENST00000452906 NUPR2A6NF83 97 aa13.56□□□□□ -0.24
HIGD1A-204ENST00000452906 SEC11AP67812 179 aa13.56□□□□□ -0.24
HIGD1A-204ENST00000452906 LELP1Q5T871 98 aa13.56□□□□□ -0.24
HIGD1A-204ENST00000452906 GAGE6Q13070 117 aa13.55□□□□□ -0.24
HIGD1A-204ENST00000452906 Q6ZUT4 128 aa13.55□□□□□ -0.24
HIGD1A-204ENST00000452906 A0A1B0GUV1 79 aa13.54□□□□□ -0.24
HIGD1A-204ENST00000452906 hDV102S1A0JD36 115 aa13.54□□□□□ -0.24
HIGD1A-204ENST00000452906 IGLC3P0DOY3 106 aa13.54□□□□□ -0.24
HIGD1A-204ENST00000452906 HERVK_113P61574 105 aa13.54□□□□□ -0.24
HIGD1A-204ENST00000452906 CEMP1Q6PRD7 247 aaPredicted RBP13.54□□□□□ -0.24
HIGD1A-204ENST00000452906 NFE4Q86UQ8 179 aa13.54□□□□□ -0.24
HIGD1A-204ENST00000452906 OPRPNQ99935 248 aaPredicted RBP13.54□□□□□ -0.24
HIGD1A-204ENST00000452906 TRAV8-6A0A0B4J262 113 aa13.53□□□□□ -0.24
HIGD1A-204ENST00000452906 CDC42SE2Q9NRR3 84 aa13.53□□□□□ -0.24
HIGD1A-204ENST00000452906 KLK5Q9Y337 293 aaPredicted RBP13.53□□□□□ -0.24
HIGD1A-204ENST00000452906 HYDINQ4G0P3 5121 aa13.53□□□□□ -0.24
HIGD1A-204ENST00000452906 IGLV4-69A0A075B6H9 119 aa13.52□□□□□ -0.25
HIGD1A-204ENST00000452906 ZC2HC1BQ5TFG8 222 aa13.52□□□□□ -0.25
HIGD1A-204ENST00000452906 CHAC1Q9BUX1 264 aa13.52□□□□□ -0.25
HIGD1A-204ENST00000452906 ALMS1Q8TCU4 4167 aa13.51□□□□□ -0.25
HIGD1A-204ENST00000452906 TINCRA0A1B0GVN0 87 aa13.51□□□□□ -0.25
HIGD1A-204ENST00000452906 C11orf86A6NJI1 115 aa13.51□□□□□ -0.25
HIGD1A-204ENST00000452906 PRO1933Q9H354 126 aa13.51□□□□□ -0.25
HIGD1A-204ENST00000452906 UQCR10Q9UDW1 63 aa13.51□□□□□ -0.25
HIGD1A-204ENST00000452906 EPPK1P58107 5090 aaKnown RBP13.5□□□□□ -0.25
HIGD1A-204ENST00000452906 TMEM262E9PQX1 116 aa13.5□□□□□ -0.25
HIGD1A-204ENST00000452906 MAJINQ3KP22 176 aa13.5□□□□□ -0.25
HIGD1A-204ENST00000452906 LYPD5Q6UWN5 251 aa13.5□□□□□ -0.25
HIGD1A-204ENST00000452906 FAM104AQ969W3 186 aa13.5□□□□□ -0.25
HIGD1A-204ENST00000452906 UBE2D1P51668 147 aa13.49□□□□□ -0.25
HIGD1A-204ENST00000452906 FAM19A3Q7Z5A8 133 aa13.49□□□□□ -0.25
HIGD1A-204ENST00000452906 GEMIN7Q9H840 131 aaKnown RBP13.49□□□□□ -0.25
HIGD1A-204ENST00000452906 PLECQ15149 4684 aaKnown RBP13.48□□□□□ -0.25
HIGD1A-204ENST00000452906 PCP4L1A6NKN8 68 aa13.48□□□□□ -0.25
HIGD1A-204ENST00000452906 CCL25O15444 150 aa13.48□□□□□ -0.25
HIGD1A-204ENST00000452906 HERVK_113P63121 156 aa13.48□□□□□ -0.25
HIGD1A-204ENST00000452906 TMEM170BQ5T4T1 132 aa13.48□□□□□ -0.25
HIGD1A-204ENST00000452906 STPG4Q8N801 248 aa13.48□□□□□ -0.25
HIGD1A-204ENST00000452906 LINC00476Q8WZB0 136 aa13.48□□□□□ -0.25
HIGD1A-204ENST00000452906 MIEN1Q9BRT3 115 aa13.48□□□□□ -0.25
HIGD1A-204ENST00000452906 A0A0J9YXV3 536 aa13.47□□□□□ -0.25
HIGD1A-204ENST00000452906 RBX1P62877 108 aa13.47□□□□□ -0.25
HIGD1A-204ENST00000452906 RNASE13Q5GAN3 156 aaKnown RBP13.47□□□□□ -0.25
HIGD1A-204ENST00000452906 H3BRM9 83 aa13.46□□□□□ -0.25
HIGD1A-204ENST00000452906 ANKRD39Q53RE8 183 aa13.46□□□□□ -0.25
HIGD1A-204ENST00000452906 SLC25A34Q6PIV7 304 aa13.46□□□□□ -0.25
HIGD1A-204ENST00000452906 BIRC6Q9NR09 4857 aa13.45□□□□□ -0.26
HIGD1A-204ENST00000452906 E9PLD3 99 aa13.45□□□□□ -0.26
HIGD1A-204ENST00000452906 COX8AP10176 69 aa13.45□□□□□ -0.26
HIGD1A-204ENST00000452906 DDTP30046 118 aa13.45□□□□□ -0.26
HIGD1A-204ENST00000452906 ZNF22P17026 224 aaPredicted RBP13.44□□□□□ -0.26
HIGD1A-204ENST00000452906 NMUP48645 174 aa13.44□□□□□ -0.26
HIGD1A-204ENST00000452906 MPV17L2Q567V2 206 aa13.44□□□□□ -0.26
HIGD1A-204ENST00000452906 IGLV4-60A0A075B6I1 120 aa13.43□□□□□ -0.26
HIGD1A-204ENST00000452906 IGLV5-45A0A087WSX0 123 aa13.43□□□□□ -0.26
HIGD1A-204ENST00000452906 TRAV13-1A0A0B4J241 112 aa13.43□□□□□ -0.26
HIGD1A-204ENST00000452906 DLEU1O43261 78 aa13.43□□□□□ -0.26
HIGD1A-204ENST00000452906 SS18Q15532 418 aa13.42□□□□□ -0.26
HIGD1A-204ENST00000452906 LINC00469Q8N7U9 141 aa13.42□□□□□ -0.26
HIGD1A-204ENST00000452906 C14orf144Q96I85 54 aa13.42□□□□□ -0.26
HIGD1A-204ENST00000452906 TMEM223A0PJW6 202 aa13.41□□□□□ -0.26
HIGD1A-204ENST00000452906 LY6G6CO95867 125 aa13.41□□□□□ -0.26
HIGD1A-204ENST00000452906 LINC00242Q5T6M2 205 aa13.41□□□□□ -0.26
HIGD1A-204ENST00000452906 PLEKHB2Q96CS7 222 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms