RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 PRSS47A8MTI9 375 aa10.41□□□□□ -0.74
SCAMP4-205ENST00000452128 D6R8Y8 96 aa10.41□□□□□ -0.74
SCAMP4-205ENST00000452128 NPYP01303 97 aa10.41□□□□□ -0.74
SCAMP4-205ENST00000452128 PPBPP02775 128 aa10.41□□□□□ -0.74
SCAMP4-205ENST00000452128 AMMECR1LQ6DCA0 310 aa10.41□□□□□ -0.74
SCAMP4-205ENST00000452128 RNASEKQ6P5S7 137 aaKnown RBP10.41□□□□□ -0.74
SCAMP4-205ENST00000452128 C9orf163Q8N9P6 203 aa10.41□□□□□ -0.74
SCAMP4-205ENST00000452128 CLRN3Q8NCR9 226 aa10.41□□□□□ -0.74
SCAMP4-205ENST00000452128 CNBPP62633 177 aaKnown RBP10.4□□□□□ -0.74
SCAMP4-205ENST00000452128 FOXI1Q12951 378 aa10.4□□□□□ -0.74
SCAMP4-205ENST00000452128 C10orf91Q5T1B1 145 aa10.4□□□□□ -0.74
SCAMP4-205ENST00000452128 C15orf56Q8N910 161 aa10.4□□□□□ -0.74
SCAMP4-205ENST00000452128 CHCHD10Q8WYQ3 142 aaPredicted RBP10.4□□□□□ -0.74
SCAMP4-205ENST00000452128 UBE2D4Q9Y2X8 147 aa10.4□□□□□ -0.74
SCAMP4-205ENST00000452128 LINC00959A0A1B0GUT2 108 aa10.39□□□□□ -0.75
SCAMP4-205ENST00000452128 GAGE12HA6NDE8 117 aa10.39□□□□□ -0.75
SCAMP4-205ENST00000452128 SMR3BP02814 79 aaPredicted RBP10.39□□□□□ -0.75
SCAMP4-205ENST00000452128 SDIM1Q6ZPB5 146 aa10.39□□□□□ -0.75
SCAMP4-205ENST00000452128 IMMP2LQ96T52 175 aa10.39□□□□□ -0.75
SCAMP4-205ENST00000452128 TIMM21Q9BVV7 248 aa10.39□□□□□ -0.75
SCAMP4-205ENST00000452128 SMIM2Q9BVW6 85 aa10.39□□□□□ -0.75
SCAMP4-205ENST00000452128 SEC11CQ9BY50 192 aa10.39□□□□□ -0.75
SCAMP4-205ENST00000452128 EPM2AB3EWF7 344 aa10.38□□□□□ -0.75
SCAMP4-205ENST00000452128 TMEM136Q6ZRR5 245 aa10.38□□□□□ -0.75
SCAMP4-205ENST00000452128 ZNF664Q8N3J9 261 aa10.38□□□□□ -0.75
SCAMP4-205ENST00000452128 KIR2DL4Q99706 377 aa10.38□□□□□ -0.75
SCAMP4-205ENST00000452128 FCER1GP30273 86 aa10.37□□□□□ -0.75
SCAMP4-205ENST00000452128 BTF3L4Q96K17 158 aa10.37□□□□□ -0.75
SCAMP4-205ENST00000452128 CHAC1Q9BUX1 264 aa10.37□□□□□ -0.75
SCAMP4-205ENST00000452128 IGKV3OR2-268A0A0C4DH90 116 aa10.36□□□□□ -0.75
SCAMP4-205ENST00000452128 Q5VSD8 79 aa10.36□□□□□ -0.75
SCAMP4-205ENST00000452128 SCXQ7RTU7 201 aa10.36□□□□□ -0.75
SCAMP4-205ENST00000452128 COMMD7Q86VX2 200 aa10.36□□□□□ -0.75
SCAMP4-205ENST00000452128 ORMDL3Q8N138 153 aa10.36□□□□□ -0.75
SCAMP4-205ENST00000452128 TMEM101Q96IK0 257 aa10.36□□□□□ -0.75
SCAMP4-205ENST00000452128 CTDSP1Q9GZU7 261 aa10.36□□□□□ -0.75
SCAMP4-205ENST00000452128 MYCBP2O75592 4640 aa10.36□□□□□ -0.75
SCAMP4-205ENST00000452128 TCAPO15273 167 aa10.35□□□□□ -0.75
SCAMP4-205ENST00000452128 PRELID3AQ96N28 172 aa10.35□□□□□ -0.75
SCAMP4-205ENST00000452128 PANO1I0J062 215 aa10.34□□□□□ -0.75
SCAMP4-205ENST00000452128 RPL39P62891 51 aaKnown RBP10.34□□□□□ -0.75
SCAMP4-205ENST00000452128 CIRBP-AS1Q8TBR5 109 aa10.34□□□□□ -0.75
SCAMP4-205ENST00000452128 LAMTOR2Q9Y2Q5 125 aa10.34□□□□□ -0.75
SCAMP4-205ENST00000452128 CARHSP1Q9Y2V2 147 aaKnown RBP10.34□□□□□ -0.75
SCAMP4-205ENST00000452128 GVQW2A0A096LPI5 108 aaPredicted RBP10.33□□□□□ -0.76
SCAMP4-205ENST00000452128 hDV102S1A0JD36 115 aa10.33□□□□□ -0.76
SCAMP4-205ENST00000452128 CCL25O15444 150 aa10.33□□□□□ -0.76
SCAMP4-205ENST00000452128 KRTAP10-4P60372 401 aaPredicted RBP10.33□□□□□ -0.76
SCAMP4-205ENST00000452128 CIRBPQ14011 172 aaKnown RBP10.33□□□□□ -0.76
SCAMP4-205ENST00000452128 CFAP161Q6P656 301 aa10.33□□□□□ -0.76
SCAMP4-205ENST00000452128 CD164L2Q6UWJ8 174 aa10.33□□□□□ -0.76
SCAMP4-205ENST00000452128 TRAV9-1A0A075B6T8 112 aa10.32□□□□□ -0.76
SCAMP4-205ENST00000452128 XCL1P47992 114 aa10.32□□□□□ -0.76
SCAMP4-205ENST00000452128 Q6ZUT4 128 aa10.32□□□□□ -0.76
SCAMP4-205ENST00000452128 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.32□□□□□ -0.76
SCAMP4-205ENST00000452128 FLG2Q5D862 2391 aaPredicted RBP10.31□□□□□ -0.76
SCAMP4-205ENST00000452128 MRPS36P82909 103 aaKnown RBP10.31□□□□□ -0.76
SCAMP4-205ENST00000452128 C1orf196B1AJZ1 125 aa10.3□□□□□ -0.76
SCAMP4-205ENST00000452128 SS18Q15532 418 aa10.3□□□□□ -0.76
SCAMP4-205ENST00000452128 RNASE13Q5GAN3 156 aaKnown RBP10.3□□□□□ -0.76
SCAMP4-205ENST00000452128 TMEM18Q96B42 140 aa10.3□□□□□ -0.76
SCAMP4-205ENST00000452128 OPRPNQ99935 248 aaPredicted RBP10.3□□□□□ -0.76
SCAMP4-205ENST00000452128 SPANXA1Q9NS26 97 aa10.3□□□□□ -0.76
SCAMP4-205ENST00000452128 FAM229AH3BQW9 127 aa10.29□□□□□ -0.76
SCAMP4-205ENST00000452128 SMAGPQ0VAQ4 97 aa10.29□□□□□ -0.76
SCAMP4-205ENST00000452128 HIGD2BQ4VC39 106 aa10.29□□□□□ -0.76
SCAMP4-205ENST00000452128 Q8N8P6 123 aa10.29□□□□□ -0.76
SCAMP4-205ENST00000452128 PYGO1Q9Y3Y4 419 aa10.29□□□□□ -0.76
SCAMP4-205ENST00000452128 AP5S1Q9NUS5 200 aa10.28□□□□□ -0.76
SCAMP4-205ENST00000452128 HERC1Q15751 4861 aa10.27□□□□□ -0.76
SCAMP4-205ENST00000452128 IGHV1-58A0A0C4DH39 117 aa10.27□□□□□ -0.77
SCAMP4-205ENST00000452128 INAFM2P0DMQ5 153 aa10.27□□□□□ -0.77
SCAMP4-205ENST00000452128 LINC00528Q8N1L1 170 aa10.27□□□□□ -0.77
SCAMP4-205ENST00000452128 IGHV3-64A0A075B6Q5 118 aa10.26□□□□□ -0.77
SCAMP4-205ENST00000452128 TRAV13-1A0A0B4J241 112 aa10.26□□□□□ -0.77
SCAMP4-205ENST00000452128 LOC389332A0A1B0GUA5 103 aa10.26□□□□□ -0.77
SCAMP4-205ENST00000452128 GNB1LQ9BYB4 327 aa10.26□□□□□ -0.77
SCAMP4-205ENST00000452128 MAP1LC3AQ9H492 121 aa10.26□□□□□ -0.77
SCAMP4-205ENST00000452128 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.25□□□□□ -0.77
SCAMP4-205ENST00000452128 IGHV3OR16-9A0A0B4J2B5 98 aa10.25□□□□□ -0.77
SCAMP4-205ENST00000452128 RAB5AP20339 215 aa10.25□□□□□ -0.77
SCAMP4-205ENST00000452128 RHEBQ15382 184 aa10.25□□□□□ -0.77
SCAMP4-205ENST00000452128 KIAA1644Q3SXP7 199 aa10.25□□□□□ -0.77
SCAMP4-205ENST00000452128 PKHD1L1Q86WI1 4243 aa10.24□□□□□ -0.77
SCAMP4-205ENST00000452128 IGLV4-3A0A075B6K6 122 aa10.24□□□□□ -0.77
SCAMP4-205ENST00000452128 K7EMI3 77 aa10.24□□□□□ -0.77
SCAMP4-205ENST00000452128 PRSS3P2Q8NHM4 247 aa10.24□□□□□ -0.77
SCAMP4-205ENST00000452128 LINC00526Q96FQ7 95 aa10.24□□□□□ -0.77
SCAMP4-205ENST00000452128 LINC01546A6NGU7 62 aa10.23□□□□□ -0.77
SCAMP4-205ENST00000452128 IGIPA6NJ69 53 aa10.23□□□□□ -0.77
SCAMP4-205ENST00000452128 COX7A2LO14548 114 aa10.23□□□□□ -0.77
SCAMP4-205ENST00000452128 SPACA4Q8TDM5 124 aa10.23□□□□□ -0.77
SCAMP4-205ENST00000452128 LRP1Q07954 4544 aaKnown RBP10.23□□□□□ -0.77
SCAMP4-205ENST00000452128 CHTF8P0CG12 524 aa10.22□□□□□ -0.77
SCAMP4-205ENST00000452128 IFI27P40305 119 aaPredicted RBP10.22□□□□□ -0.77
SCAMP4-205ENST00000452128 COX6A2Q02221 97 aa10.22□□□□□ -0.77
SCAMP4-205ENST00000452128 C5orf38Q86SI9 138 aa10.22□□□□□ -0.77
SCAMP4-205ENST00000452128 ALKBH7Q9BT30 221 aaPredicted RBP10.22□□□□□ -0.77
SCAMP4-205ENST00000452128 NXT2Q9NPJ8 142 aaKnown RBP10.22□□□□□ -0.77
SCAMP4-205ENST00000452128 C2orf66Q6UXQ4 117 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms