RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TMEM191AQ9H0A3 160 aa7.99□□□□□ -1.13
CPSF4-208ENST00000452047 V9GYV3 84 aa7.99□□□□□ -1.13
CPSF4-208ENST00000452047 FAT3Q8TDW7 4589 aa7.99□□□□□ -1.13
CPSF4-208ENST00000452047 PKHD1L1Q86WI1 4243 aa7.98□□□□□ -1.13
CPSF4-208ENST00000452047 GAGE12HA6NDE8 117 aa7.98□□□□□ -1.13
CPSF4-208ENST00000452047 I3L3M4 83 aa7.98□□□□□ -1.13
CPSF4-208ENST00000452047 J3QL48 77 aa7.98□□□□□ -1.13
CPSF4-208ENST00000452047 TSHBP01222 138 aa7.98□□□□□ -1.13
CPSF4-208ENST00000452047 ESDP10768 282 aa7.98□□□□□ -1.13
CPSF4-208ENST00000452047 RPS10P46783 165 aaKnown RBP7.98□□□□□ -1.13
CPSF4-208ENST00000452047 AMMECR1LQ6DCA0 310 aa7.98□□□□□ -1.13
CPSF4-208ENST00000452047 IGKV3OR2-268A0A0C4DH90 116 aa7.97□□□□□ -1.13
CPSF4-208ENST00000452047 ZNF25P17030 456 aaPredicted RBP7.97□□□□□ -1.13
CPSF4-208ENST00000452047 RAB4AP20338 218 aa7.97□□□□□ -1.13
CPSF4-208ENST00000452047 RNASEKQ6P5S7 137 aaKnown RBP7.97□□□□□ -1.13
CPSF4-208ENST00000452047 AMN1Q8IY45 258 aa7.97□□□□□ -1.13
CPSF4-208ENST00000452047 CHCHD10Q8WYQ3 142 aaPredicted RBP7.97□□□□□ -1.13
CPSF4-208ENST00000452047 ISOC2Q96AB3 205 aa7.97□□□□□ -1.13
CPSF4-208ENST00000452047 YPEL4Q96NS1 127 aa7.97□□□□□ -1.13
CPSF4-208ENST00000452047 ST20Q9HBF5 79 aa7.97□□□□□ -1.13
CPSF4-208ENST00000452047 AP5S1Q9NUS5 200 aa7.97□□□□□ -1.13
CPSF4-208ENST00000452047 TMEM242Q9NWH2 141 aa7.97□□□□□ -1.13
CPSF4-208ENST00000452047 IGHV3-64A0A075B6Q5 118 aa7.96□□□□□ -1.14
CPSF4-208ENST00000452047 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.96□□□□□ -1.14
CPSF4-208ENST00000452047 TRBV27A0A0K0K1C4 114 aa7.96□□□□□ -1.14
CPSF4-208ENST00000452047 C5orf52A6NGY3 159 aa7.96□□□□□ -1.14
CPSF4-208ENST00000452047 S100A6P06703 90 aa7.96□□□□□ -1.14
CPSF4-208ENST00000452047 SMIM6P0DI80 62 aa7.96□□□□□ -1.14
CPSF4-208ENST00000452047 PMCHP20382 165 aa7.96□□□□□ -1.14
CPSF4-208ENST00000452047 POLR2KP53803 58 aaKnown RBP7.96□□□□□ -1.14
CPSF4-208ENST00000452047 RPL37AP61513 92 aaKnown RBP7.96□□□□□ -1.14
CPSF4-208ENST00000452047 NUP35Q8NFH5 326 aa7.96□□□□□ -1.14
CPSF4-208ENST00000452047 MRAP2Q96G30 205 aa7.96□□□□□ -1.14
CPSF4-208ENST00000452047 AKR1D1P51857 326 aa7.95□□□□□ -1.14
CPSF4-208ENST00000452047 RPL23P62829 140 aaKnown RBP7.95□□□□□ -1.14
CPSF4-208ENST00000452047 FOXI1Q12951 378 aa7.95□□□□□ -1.14
CPSF4-208ENST00000452047 TMEM241Q24JQ0 296 aa7.95□□□□□ -1.14
CPSF4-208ENST00000452047 OR5A1Q8NGJ0 315 aa7.95□□□□□ -1.14
CPSF4-208ENST00000452047 CTDSP1Q9GZU7 261 aa7.95□□□□□ -1.14
CPSF4-208ENST00000452047 GVQW2A0A096LPI5 108 aaPredicted RBP7.94□□□□□ -1.14
CPSF4-208ENST00000452047 CHTF8P0CG12 524 aa7.94□□□□□ -1.14
CPSF4-208ENST00000452047 HNRNPA3P51991 378 aaKnown RBP7.94□□□□□ -1.14
CPSF4-208ENST00000452047 RIGQ13278 110 aa7.94□□□□□ -1.14
CPSF4-208ENST00000452047 HIGD2BQ4VC39 106 aa7.94□□□□□ -1.14
CPSF4-208ENST00000452047 CFAP161Q6P656 301 aa7.94□□□□□ -1.14
CPSF4-208ENST00000452047 MRPL52Q86TS9 123 aaKnown RBP7.94□□□□□ -1.14
CPSF4-208ENST00000452047 SPACA4Q8TDM5 124 aa7.94□□□□□ -1.14
CPSF4-208ENST00000452047 SMKR1H3BMG3 65 aa7.93□□□□□ -1.14
CPSF4-208ENST00000452047 ADIRFQ15847 76 aa7.93□□□□□ -1.14
CPSF4-208ENST00000452047 NRACQ8N912 160 aa7.93□□□□□ -1.14
CPSF4-208ENST00000452047 TMEM101Q96IK0 257 aa7.93□□□□□ -1.14
CPSF4-208ENST00000452047 BTF3L4Q96K17 158 aa7.93□□□□□ -1.14
CPSF4-208ENST00000452047 C12orf57Q99622 126 aa7.93□□□□□ -1.14
CPSF4-208ENST00000452047 NAT8Q9UHE5 227 aa7.93□□□□□ -1.14
CPSF4-208ENST00000452047 NAT8BQ9UHF3 227 aa7.93□□□□□ -1.14
CPSF4-208ENST00000452047 A0A087WYN8 130 aa7.92□□□□□ -1.14
CPSF4-208ENST00000452047 LINC00959A0A1B0GUT2 108 aa7.92□□□□□ -1.14
CPSF4-208ENST00000452047 SMIM27A0A1W2PRY6 76 aa7.92□□□□□ -1.14
CPSF4-208ENST00000452047 OXTP01178 125 aa7.92□□□□□ -1.14
CPSF4-208ENST00000452047 XCL1P47992 114 aa7.92□□□□□ -1.14
CPSF4-208ENST00000452047 SNRPEP62304 92 aaKnown RBP7.92□□□□□ -1.14
CPSF4-208ENST00000452047 CDC42SE2Q9NRR3 84 aa7.92□□□□□ -1.14
CPSF4-208ENST00000452047 CCL25O15444 150 aa7.91□□□□□ -1.14
CPSF4-208ENST00000452047 SUMO2P61956 95 aaKnown RBP7.91□□□□□ -1.14
CPSF4-208ENST00000452047 TRBV24-1A0A075B6N3 115 aa7.9□□□□□ -1.14
CPSF4-208ENST00000452047 VCYO14598 125 aa7.9□□□□□ -1.14
CPSF4-208ENST00000452047 PPP1R17O96001 155 aa7.9□□□□□ -1.14
CPSF4-208ENST00000452047 COX6A2Q02221 97 aa7.9□□□□□ -1.14
CPSF4-208ENST00000452047 MRPL51Q4U2R6 128 aaKnown RBP7.9□□□□□ -1.14
CPSF4-208ENST00000452047 FAM104BQ5XKR9 115 aa7.9□□□□□ -1.14
CPSF4-208ENST00000452047 ZNF664Q8N3J9 261 aa7.9□□□□□ -1.14
CPSF4-208ENST00000452047 PRSS3P2Q8NHM4 247 aa7.9□□□□□ -1.14
CPSF4-208ENST00000452047 PLAC8Q9NZF1 115 aa7.9□□□□□ -1.14
CPSF4-208ENST00000452047 FABP9Q0Z7S8 132 aa7.89□□□□□ -1.15
CPSF4-208ENST00000452047 UBE2D4Q9Y2X8 147 aa7.89□□□□□ -1.15
CPSF4-208ENST00000452047 CSDC2Q9Y534 153 aaKnown RBP7.89□□□□□ -1.15
CPSF4-208ENST00000452047 IGHV1-58A0A0C4DH39 117 aa7.88□□□□□ -1.15
CPSF4-208ENST00000452047 PPP1R2P9O14990 202 aa7.88□□□□□ -1.15
CPSF4-208ENST00000452047 FCER1GP30273 86 aa7.88□□□□□ -1.15
CPSF4-208ENST00000452047 CAMPP49913 170 aa7.88□□□□□ -1.15
CPSF4-208ENST00000452047 SS18Q15532 418 aa7.88□□□□□ -1.15
CPSF4-208ENST00000452047 CD164L2Q6UWJ8 174 aa7.88□□□□□ -1.15
CPSF4-208ENST00000452047 KIR2DL4Q99706 377 aa7.88□□□□□ -1.15
CPSF4-208ENST00000452047 A0A1B0GW15 77 aa7.87□□□□□ -1.15
CPSF4-208ENST00000452047 RPL32P62910 135 aaKnown RBP7.87□□□□□ -1.15
CPSF4-208ENST00000452047 ANAPC16Q96DE5 110 aa7.87□□□□□ -1.15
CPSF4-208ENST00000452047 LINC00526Q96FQ7 95 aa7.87□□□□□ -1.15
CPSF4-208ENST00000452047 DPH3Q96FX2 82 aa7.87□□□□□ -1.15
CPSF4-208ENST00000452047 A0A096LNI7 61 aa7.86□□□□□ -1.15
CPSF4-208ENST00000452047 IGKV2-24A0A0C4DH68 120 aa7.86□□□□□ -1.15
CPSF4-208ENST00000452047 A0A1B0GXF2 115 aa7.86□□□□□ -1.15
CPSF4-208ENST00000452047 S100PP25815 95 aa7.86□□□□□ -1.15
CPSF4-208ENST00000452047 MAJINQ3KP22 176 aa7.86□□□□□ -1.15
CPSF4-208ENST00000452047 C20orf78Q9BR46 151 aa7.86□□□□□ -1.15
CPSF4-208ENST00000452047 HMCN2Q8NDA2 5059 aa7.85□□□□□ -1.15
CPSF4-208ENST00000452047 PHOX2AO14813 284 aa7.85□□□□□ -1.15
CPSF4-208ENST00000452047 TNFRSF6BO95407 300 aa7.85□□□□□ -1.15
CPSF4-208ENST00000452047 CKS2P33552 79 aa7.85□□□□□ -1.15
CPSF4-208ENST00000452047 HBBP68871 147 aa7.85□□□□□ -1.15
CPSF4-208ENST00000452047 CTAG1AP78358 180 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms