RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 RBMY1EA6NEQ0 496 aaKnown RBP6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 RBMY1DP0C7P1 496 aaKnown RBP6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 RBMY1A1P0DJD3 496 aaKnown RBP6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 RBMY1CP0DJD4 496 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 HILS1P60008 231 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 RBMY1FQ15415 496 aaKnown RBP6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 PLA2G2CQ5R387 149 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 AKAP6Q13023 2319 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 TRAV23DV6A0A075B6W5 121 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 FAM236DA0A1B0GTK5 79 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 NCR3O14931 201 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 FAM236CP0DP71 79 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 EDN2P20800 178 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 LINC00336Q6ZUF6 198 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 PTPRZ1P23471 2315 aaPredicted RBP6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 GVINP1Q7Z2Y8 2422 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 PF4P02776 101 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 J3QLI3 93 aa6.8□□□□□ -1.32
SYNPO2-204ENST00000448416 ANKHD1Q8IWZ3 2542 aaKnown RBP6.8□□□□□ -1.32
SYNPO2-204ENST00000448416 SVEP1Q4LDE5 3571 aa6.8□□□□□ -1.32
SYNPO2-204ENST00000448416 ACACAQ13085 2346 aa6.8□□□□□ -1.32
SYNPO2-204ENST00000448416 DOPEY2Q9Y3R5 2298 aa6.79□□□□□ -1.32
SYNPO2-204ENST00000448416 SMIM1B2RUZ4 78 aa6.79□□□□□ -1.32
SYNPO2-204ENST00000448416 LINC00242Q5T6M2 205 aa6.79□□□□□ -1.32
SYNPO2-204ENST00000448416 WFDC9Q8NEX5 89 aa6.79□□□□□ -1.32
SYNPO2-204ENST00000448416 USMG5Q96IX5 58 aa6.79□□□□□ -1.32
SYNPO2-204ENST00000448416 PRORYQ9H606 182 aa6.79□□□□□ -1.32
SYNPO2-204ENST00000448416 MOB4Q9Y3A3 225 aa6.79□□□□□ -1.32
SYNPO2-204ENST00000448416 IGHV3OR16-12A0A075B7B8 117 aa6.79□□□□□ -1.32
SYNPO2-204ENST00000448416 LECT2O14960 151 aa6.79□□□□□ -1.32
SYNPO2-204ENST00000448416 LINC00337Q8N6G1 96 aa6.79□□□□□ -1.32
SYNPO2-204ENST00000448416 C19orf54Q5BKX5 351 aa6.79□□□□□ -1.32
SYNPO2-204ENST00000448416 OBSCN-AS1Q96MR7 158 aa6.79□□□□□ -1.32
SYNPO2-204ENST00000448416 H0YGX0 51 aa6.78□□□□□ -1.32
SYNPO2-204ENST00000448416 SNRPD3P62318 126 aaKnown RBP6.78□□□□□ -1.32
SYNPO2-204ENST00000448416 SMIM11BQ8TCY0 68 aa6.78□□□□□ -1.32
SYNPO2-204ENST00000448416 LAMA5O15230 3695 aa6.78□□□□□ -1.32
SYNPO2-204ENST00000448416 ATMQ13315 3056 aa6.78□□□□□ -1.32
SYNPO2-204ENST00000448416 S100A7L2Q5SY68 101 aa6.78□□□□□ -1.32
SYNPO2-204ENST00000448416 Q6ZSN1 163 aa6.78□□□□□ -1.32
SYNPO2-204ENST00000448416 PKIGQ9Y2B9 76 aa6.78□□□□□ -1.32
SYNPO2-204ENST00000448416 SERP1Q9Y6X1 66 aa6.78□□□□□ -1.32
SYNPO2-204ENST00000448416 XCL1P47992 114 aa6.78□□□□□ -1.32
SYNPO2-204ENST00000448416 SND1-IT1Q9HBX3 110 aa6.78□□□□□ -1.32
SYNPO2-204ENST00000448416 XCL2Q9UBD3 114 aa6.78□□□□□ -1.32
SYNPO2-204ENST00000448416 DEFB124Q8NES8 71 aa6.77□□□□□ -1.33
SYNPO2-204ENST00000448416 SLPIP03973 132 aa6.77□□□□□ -1.33
SYNPO2-204ENST00000448416 PIMREGQ9BSJ6 248 aa6.77□□□□□ -1.33
SYNPO2-204ENST00000448416 RPL35AP18077 110 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-204ENST00000448416 FAM19A1Q7Z5A9 133 aa6.77□□□□□ -1.33
SYNPO2-204ENST00000448416 RELNP78509 3460 aa6.76□□□□□ -1.33
SYNPO2-204ENST00000448416 RPL36AP83881 106 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-204ENST00000448416 ENHOQ6UWT2 76 aa6.76□□□□□ -1.33
SYNPO2-204ENST00000448416 MIR7-3HGQ8N6C7 128 aa6.76□□□□□ -1.33
SYNPO2-204ENST00000448416 RPL36ALQ969Q0 106 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-204ENST00000448416 CCKP06307 115 aa6.76□□□□□ -1.33
SYNPO2-204ENST00000448416 IGKV2-28A0A075B6P5 120 aa6.76□□□□□ -1.33
SYNPO2-204ENST00000448416 IGKV2D-28P01615 120 aa6.76□□□□□ -1.33
SYNPO2-204ENST00000448416 GRNP28799 593 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-204ENST00000448416 PSMB8P28062 276 aa6.75□□□□□ -1.33
SYNPO2-204ENST00000448416 K7EMT4 169 aa6.75□□□□□ -1.33
SYNPO2-204ENST00000448416 PRM2P04554 102 aa6.75□□□□□ -1.33
SYNPO2-204ENST00000448416 ATP5EP2Q5VTU8 51 aa6.75□□□□□ -1.33
SYNPO2-204ENST00000448416 EP300Q09472 2414 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-204ENST00000448416 ORMDL1Q9P0S3 153 aa6.74□□□□□ -1.33
SYNPO2-204ENST00000448416 SPTA1P02549 2419 aa6.74□□□□□ -1.33
SYNPO2-204ENST00000448416 LY6EQ16553 131 aa6.74□□□□□ -1.33
SYNPO2-204ENST00000448416 F8WDY8 70 aa6.74□□□□□ -1.33
SYNPO2-204ENST00000448416 LINC00158P58513 81 aa6.74□□□□□ -1.33
SYNPO2-204ENST00000448416 WFDC11Q8NEX6 87 aa6.74□□□□□ -1.33
SYNPO2-204ENST00000448416 ASH1LQ9NR48 2969 aaKnown RBP6.73□□□□□ -1.33
SYNPO2-204ENST00000448416 H3BUA1 57 aa6.73□□□□□ -1.33
SYNPO2-204ENST00000448416 H7BZZ5 65 aa6.73□□□□□ -1.33
SYNPO2-204ENST00000448416 EPM2AB3EWF7 344 aa6.73□□□□□ -1.33
SYNPO2-204ENST00000448416 TOMM7Q9P0U1 55 aa6.73□□□□□ -1.33
SYNPO2-204ENST00000448416 K7EQG2 157 aa6.73□□□□□ -1.33
SYNPO2-204ENST00000448416 SMIM26A0A096LP01 95 aa6.72□□□□□ -1.33
SYNPO2-204ENST00000448416 IGHV3-53P01767 116 aa6.72□□□□□ -1.33
SYNPO2-204ENST00000448416 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.72□□□□□ -1.33
SYNPO2-204ENST00000448416 SPTAN1Q13813 2472 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-204ENST00000448416 UBL5Q9BZL1 73 aa6.72□□□□□ -1.33
SYNPO2-204ENST00000448416 TMEM86BQ8N661 226 aa6.71□□□□□ -1.33
SYNPO2-204ENST00000448416 PAX4O43316 350 aa6.71□□□□□ -1.34
SYNPO2-204ENST00000448416 JMJD7-PLA2G4BH0Y9G9 81 aa6.71□□□□□ -1.34
SYNPO2-204ENST00000448416 CCL18P55774 89 aa6.71□□□□□ -1.34
SYNPO2-204ENST00000448416 BRD3OSQ6XYD6 125 aa6.71□□□□□ -1.34
SYNPO2-204ENST00000448416 Q96MF0 132 aa6.71□□□□□ -1.34
SYNPO2-204ENST00000448416 TRAV7A0A075B6U4 112 aa6.7□□□□□ -1.34
SYNPO2-204ENST00000448416 SS18Q15532 418 aa6.7□□□□□ -1.34
SYNPO2-204ENST00000448416 C11orf71Q6IPW1 123 aa6.7□□□□□ -1.34
SYNPO2-204ENST00000448416 FAM19A3Q7Z5A8 133 aa6.7□□□□□ -1.34
SYNPO2-204ENST00000448416 CREBBPQ92793 2442 aa6.7□□□□□ -1.34
SYNPO2-204ENST00000448416 BLCAPP62952 87 aa6.7□□□□□ -1.34
SYNPO2-204ENST00000448416 Q8NA96 180 aa6.7□□□□□ -1.34
SYNPO2-204ENST00000448416 SNURFQ9Y675 71 aa6.7□□□□□ -1.34
SYNPO2-204ENST00000448416 ANKRD11Q6UB99 2663 aaPredicted RBP6.7□□□□□ -1.34
SYNPO2-204ENST00000448416 TRBV10-3A0A0K0K1G6 114 aa6.7□□□□□ -1.34
SYNPO2-204ENST00000448416 FP248Q71RG6 208 aaPredicted RBP6.7□□□□□ -1.34
SYNPO2-204ENST00000448416 COX7B2Q8TF08 81 aa6.7□□□□□ -1.34
SYNPO2-204ENST00000448416 C16orf95Q9H693 158 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms