RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TMEM136Q6ZRR5 245 aa9.67□□□□□ -0.86
HDAC4-204ENST00000446876 ORMDL3Q8N138 153 aa9.67□□□□□ -0.86
HDAC4-204ENST00000446876 PRELID3AQ96N28 172 aa9.67□□□□□ -0.86
HDAC4-204ENST00000446876 PPBPP02775 128 aa9.66□□□□□ -0.86
HDAC4-204ENST00000446876 RPL32P62910 135 aaKnown RBP9.66□□□□□ -0.86
HDAC4-204ENST00000446876 MRPL52Q86TS9 123 aaKnown RBP9.66□□□□□ -0.86
HDAC4-204ENST00000446876 Q8N1X5 172 aa9.66□□□□□ -0.86
HDAC4-204ENST00000446876 CHCHD10Q8WYQ3 142 aaPredicted RBP9.66□□□□□ -0.86
HDAC4-204ENST00000446876 TCAPO15273 167 aa9.65□□□□□ -0.86
HDAC4-204ENST00000446876 RNASE13Q5GAN3 156 aaKnown RBP9.65□□□□□ -0.86
HDAC4-204ENST00000446876 CTDSP1Q9GZU7 261 aa9.65□□□□□ -0.86
HDAC4-204ENST00000446876 UBE2D4Q9Y2X8 147 aa9.65□□□□□ -0.86
HDAC4-204ENST00000446876 PHOX2AO14813 284 aa9.64□□□□□ -0.87
HDAC4-204ENST00000446876 RPL39P62891 51 aaKnown RBP9.64□□□□□ -0.87
HDAC4-204ENST00000446876 C10orf91Q5T1B1 145 aa9.64□□□□□ -0.87
HDAC4-204ENST00000446876 ZNF664Q8N3J9 261 aa9.64□□□□□ -0.87
HDAC4-204ENST00000446876 IMMP2LQ96T52 175 aa9.64□□□□□ -0.87
HDAC4-204ENST00000446876 CDC42SE2Q9NRR3 84 aa9.64□□□□□ -0.87
HDAC4-204ENST00000446876 LINC00959A0A1B0GUT2 108 aa9.63□□□□□ -0.87
HDAC4-204ENST00000446876 SMR3BP02814 79 aaPredicted RBP9.63□□□□□ -0.87
HDAC4-204ENST00000446876 XCL1P47992 114 aa9.63□□□□□ -0.87
HDAC4-204ENST00000446876 DGAT2L7PQ6IED9 249 aa9.63□□□□□ -0.87
HDAC4-204ENST00000446876 Q6ZUT4 128 aa9.63□□□□□ -0.87
HDAC4-204ENST00000446876 CARHSP1Q9Y2V2 147 aaKnown RBP9.63□□□□□ -0.87
HDAC4-204ENST00000446876 LOC389332A0A1B0GUA5 103 aa9.62□□□□□ -0.87
HDAC4-204ENST00000446876 hDV102S1A0JD36 115 aa9.62□□□□□ -0.87
HDAC4-204ENST00000446876 CCL25O15444 150 aa9.62□□□□□ -0.87
HDAC4-204ENST00000446876 FOXI1Q12951 378 aa9.62□□□□□ -0.87
HDAC4-204ENST00000446876 Q6ZSA8 131 aa9.62□□□□□ -0.87
HDAC4-204ENST00000446876 C15orf56Q8N910 161 aa9.62□□□□□ -0.87
HDAC4-204ENST00000446876 FAT1Q14517 4588 aa9.61□□□□□ -0.87
HDAC4-204ENST00000446876 CLRN3Q8NCR9 226 aa9.61□□□□□ -0.87
HDAC4-204ENST00000446876 KIAA1644Q3SXP7 199 aa9.6□□□□□ -0.87
HDAC4-204ENST00000446876 HIGD2BQ4VC39 106 aa9.6□□□□□ -0.87
HDAC4-204ENST00000446876 TMEM18Q96B42 140 aa9.6□□□□□ -0.87
HDAC4-204ENST00000446876 MAP1LC3AQ9H492 121 aa9.6□□□□□ -0.87
HDAC4-204ENST00000446876 RPS10P5Q9NQ39 176 aa9.6□□□□□ -0.87
HDAC4-204ENST00000446876 TRAV9-1A0A075B6T8 112 aa9.59□□□□□ -0.87
HDAC4-204ENST00000446876 SLPIP03973 132 aa9.59□□□□□ -0.87
HDAC4-204ENST00000446876 S100PP25815 95 aa9.59□□□□□ -0.87
HDAC4-204ENST00000446876 SMAGPQ0VAQ4 97 aa9.59□□□□□ -0.87
HDAC4-204ENST00000446876 SS18Q15532 418 aa9.59□□□□□ -0.87
HDAC4-204ENST00000446876 FAM104AQ969W3 186 aa9.59□□□□□ -0.87
HDAC4-204ENST00000446876 OPRPNQ99935 248 aaPredicted RBP9.59□□□□□ -0.87
HDAC4-204ENST00000446876 TIMM21Q9BVV7 248 aa9.59□□□□□ -0.87
HDAC4-204ENST00000446876 LAMTOR2Q9Y2Q5 125 aa9.59□□□□□ -0.87
HDAC4-204ENST00000446876 CSDC2Q9Y534 153 aaKnown RBP9.59□□□□□ -0.87
HDAC4-204ENST00000446876 TRAV13-1A0A0B4J241 112 aa9.58□□□□□ -0.88
HDAC4-204ENST00000446876 EPM2AB3EWF7 344 aa9.58□□□□□ -0.88
HDAC4-204ENST00000446876 RAB5AP20339 215 aa9.58□□□□□ -0.88
HDAC4-204ENST00000446876 RHEBQ15382 184 aa9.58□□□□□ -0.88
HDAC4-204ENST00000446876 SCXQ7RTU7 201 aa9.58□□□□□ -0.88
HDAC4-204ENST00000446876 PRSS47A8MTI9 375 aa9.57□□□□□ -0.88
HDAC4-204ENST00000446876 APOC3P02656 99 aa9.57□□□□□ -0.88
HDAC4-204ENST00000446876 Q5VSD8 79 aa9.57□□□□□ -0.88
HDAC4-204ENST00000446876 Q8N8P6 123 aa9.57□□□□□ -0.88
HDAC4-204ENST00000446876 C9orf163Q8N9P6 203 aa9.57□□□□□ -0.88
HDAC4-204ENST00000446876 AP5S1Q9NUS5 200 aa9.57□□□□□ -0.88
HDAC4-204ENST00000446876 CNBPP62633 177 aaKnown RBP9.56□□□□□ -0.88
HDAC4-204ENST00000446876 CFAP161Q6P656 301 aa9.56□□□□□ -0.88
HDAC4-204ENST00000446876 CD164L2Q6UWJ8 174 aa9.56□□□□□ -0.88
HDAC4-204ENST00000446876 SPANXA1Q9NS26 97 aa9.56□□□□□ -0.88
HDAC4-204ENST00000446876 GVQW2A0A096LPI5 108 aaPredicted RBP9.55□□□□□ -0.88
HDAC4-204ENST00000446876 LINC00526Q96FQ7 95 aa9.55□□□□□ -0.88
HDAC4-204ENST00000446876 VPS13BQ7Z7G8 4022 aa9.55□□□□□ -0.88
HDAC4-204ENST00000446876 C1orf196B1AJZ1 125 aa9.54□□□□□ -0.88
HDAC4-204ENST00000446876 PANO1I0J062 215 aa9.54□□□□□ -0.88
HDAC4-204ENST00000446876 IFI27P40305 119 aaPredicted RBP9.54□□□□□ -0.88
HDAC4-204ENST00000446876 CHAC1Q9BUX1 264 aa9.54□□□□□ -0.88
HDAC4-204ENST00000446876 GNB1LQ9BYB4 327 aa9.54□□□□□ -0.88
HDAC4-204ENST00000446876 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.54□□□□□ -0.88
HDAC4-204ENST00000446876 TGIF2-C20orf24A0A0A6YYL0 155 aa9.53□□□□□ -0.88
HDAC4-204ENST00000446876 IGHV1-58A0A0C4DH39 117 aa9.53□□□□□ -0.88
HDAC4-204ENST00000446876 MRPS36P82909 103 aaKnown RBP9.53□□□□□ -0.88
HDAC4-204ENST00000446876 SDIM1Q6ZPB5 146 aa9.53□□□□□ -0.88
HDAC4-204ENST00000446876 CIRBP-AS1Q8TBR5 109 aa9.53□□□□□ -0.88
HDAC4-204ENST00000446876 IGLV4-3A0A075B6K6 122 aa9.52□□□□□ -0.89
HDAC4-204ENST00000446876 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.52□□□□□ -0.89
HDAC4-204ENST00000446876 IFITM10A6NMD0 228 aa9.52□□□□□ -0.89
HDAC4-204ENST00000446876 NDUFA5Q16718 116 aa9.52□□□□□ -0.89
HDAC4-204ENST00000446876 C2orf66Q6UXQ4 117 aa9.52□□□□□ -0.89
HDAC4-204ENST00000446876 C5orf38Q86SI9 138 aa9.52□□□□□ -0.89
HDAC4-204ENST00000446876 MRPL18Q9H0U6 180 aaKnown RBP9.52□□□□□ -0.89
HDAC4-204ENST00000446876 NXT2Q9NPJ8 142 aaKnown RBP9.52□□□□□ -0.89
HDAC4-204ENST00000446876 IGHV3-64A0A075B6Q5 118 aa9.51□□□□□ -0.89
HDAC4-204ENST00000446876 COX7A2LO14548 114 aa9.51□□□□□ -0.89
HDAC4-204ENST00000446876 CHTF8P0CG12 524 aa9.51□□□□□ -0.89
HDAC4-204ENST00000446876 ZC2HC1BQ5TFG8 222 aa9.51□□□□□ -0.89
HDAC4-204ENST00000446876 LINC00528Q8N1L1 170 aa9.51□□□□□ -0.89
HDAC4-204ENST00000446876 SVBPQ8N300 66 aa9.51□□□□□ -0.89
HDAC4-204ENST00000446876 CYSLTR1Q9Y271 337 aa9.51□□□□□ -0.89
HDAC4-204ENST00000446876 FAM229AH3BQW9 127 aa9.5□□□□□ -0.89
HDAC4-204ENST00000446876 SNAPINO95295 136 aa9.5□□□□□ -0.89
HDAC4-204ENST00000446876 MALP21145 153 aa9.5□□□□□ -0.89
HDAC4-204ENST00000446876 FABP9Q0Z7S8 132 aa9.5□□□□□ -0.89
HDAC4-204ENST00000446876 ORMDL2Q53FV1 153 aa9.5□□□□□ -0.89
HDAC4-204ENST00000446876 ALKBH7Q9BT30 221 aaPredicted RBP9.5□□□□□ -0.89
HDAC4-204ENST00000446876 PYGO1Q9Y3Y4 419 aa9.5□□□□□ -0.89
HDAC4-204ENST00000446876 COX19Q49B96 90 aa9.49□□□□□ -0.89
HDAC4-204ENST00000446876 TMEM141Q96I45 108 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms