RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 HIGD1CA8MV81 97 aa7.25□□□□□ -1.25
CDCA3-203ENST00000446553 I3L3M4 83 aa7.25□□□□□ -1.25
CDCA3-203ENST00000446553 SCO1O75880 301 aa7.25□□□□□ -1.25
CDCA3-203ENST00000446553 CBLN2Q8IUK8 224 aa7.25□□□□□ -1.25
CDCA3-203ENST00000446553 RNF185Q96GF1 192 aa7.25□□□□□ -1.25
CDCA3-203ENST00000446553 AP5S1Q9NUS5 200 aa7.25□□□□□ -1.25
CDCA3-203ENST00000446553 TRBV24-1A0A075B6N3 115 aa7.24□□□□□ -1.25
CDCA3-203ENST00000446553 hDV102S1A0JD36 115 aa7.24□□□□□ -1.25
CDCA3-203ENST00000446553 ESDP10768 282 aa7.24□□□□□ -1.25
CDCA3-203ENST00000446553 AMMECR1LQ6DCA0 310 aa7.24□□□□□ -1.25
CDCA3-203ENST00000446553 MRAP2Q96G30 205 aa7.24□□□□□ -1.25
CDCA3-203ENST00000446553 YPEL4Q96NS1 127 aa7.24□□□□□ -1.25
CDCA3-203ENST00000446553 IGHV3-64A0A075B6Q5 118 aa7.23□□□□□ -1.25
CDCA3-203ENST00000446553 TRBV27A0A0K0K1C4 114 aa7.23□□□□□ -1.25
CDCA3-203ENST00000446553 A0A1B0GW15 77 aa7.23□□□□□ -1.25
CDCA3-203ENST00000446553 J3QL48 77 aa7.23□□□□□ -1.25
CDCA3-203ENST00000446553 PPP1R17O96001 155 aa7.23□□□□□ -1.25
CDCA3-203ENST00000446553 OXTP01178 125 aa7.23□□□□□ -1.25
CDCA3-203ENST00000446553 FGF6P10767 208 aa7.23□□□□□ -1.25
CDCA3-203ENST00000446553 PMCHP20382 165 aa7.23□□□□□ -1.25
CDCA3-203ENST00000446553 POLR2KP53803 58 aaKnown RBP7.23□□□□□ -1.25
CDCA3-203ENST00000446553 MRPL52Q86TS9 123 aaKnown RBP7.23□□□□□ -1.25
CDCA3-203ENST00000446553 NUP35Q8NFH5 326 aa7.23□□□□□ -1.25
CDCA3-203ENST00000446553 ST20Q9HBF5 79 aa7.23□□□□□ -1.25
CDCA3-203ENST00000446553 GAGE12HA6NDE8 117 aa7.22□□□□□ -1.25
CDCA3-203ENST00000446553 RAB4AP20338 218 aa7.22□□□□□ -1.25
CDCA3-203ENST00000446553 RIGQ13278 110 aa7.22□□□□□ -1.25
CDCA3-203ENST00000446553 COX19Q49B96 90 aa7.22□□□□□ -1.25
CDCA3-203ENST00000446553 RNASEKQ6P5S7 137 aaKnown RBP7.22□□□□□ -1.25
CDCA3-203ENST00000446553 ATP5L2Q7Z4Y8 100 aa7.22□□□□□ -1.25
CDCA3-203ENST00000446553 C15orf56Q8N910 161 aa7.22□□□□□ -1.25
CDCA3-203ENST00000446553 OR5A1Q8NGJ0 315 aa7.22□□□□□ -1.25
CDCA3-203ENST00000446553 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.22□□□□□ -1.25
CDCA3-203ENST00000446553 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.21□□□□□ -1.26
CDCA3-203ENST00000446553 TGIF2-C20orf24A0A0A6YYL0 155 aa7.21□□□□□ -1.26
CDCA3-203ENST00000446553 IGKV2-29A2NJV5 120 aaPredicted RBP7.21□□□□□ -1.26
CDCA3-203ENST00000446553 COLCA2A8K830 154 aa7.21□□□□□ -1.26
CDCA3-203ENST00000446553 TSHBP01222 138 aa7.21□□□□□ -1.26
CDCA3-203ENST00000446553 SLPIP03973 132 aa7.21□□□□□ -1.26
CDCA3-203ENST00000446553 S100A8P05109 93 aa7.21□□□□□ -1.26
CDCA3-203ENST00000446553 RPL37AP61513 92 aaKnown RBP7.21□□□□□ -1.26
CDCA3-203ENST00000446553 CHCHD10Q8WYQ3 142 aaPredicted RBP7.21□□□□□ -1.26
CDCA3-203ENST00000446553 TMEM101Q96IK0 257 aa7.21□□□□□ -1.26
CDCA3-203ENST00000446553 GVQW2A0A096LPI5 108 aaPredicted RBP7.2□□□□□ -1.26
CDCA3-203ENST00000446553 PANO1I0J062 215 aa7.2□□□□□ -1.26
CDCA3-203ENST00000446553 HBBP68871 147 aa7.2□□□□□ -1.26
CDCA3-203ENST00000446553 SMAGPQ0VAQ4 97 aa7.2□□□□□ -1.26
CDCA3-203ENST00000446553 CSDC2Q9Y534 153 aaKnown RBP7.2□□□□□ -1.26
CDCA3-203ENST00000446553 A0A1B0GXF2 115 aa7.19□□□□□ -1.26
CDCA3-203ENST00000446553 VCYO14598 125 aa7.19□□□□□ -1.26
CDCA3-203ENST00000446553 CCL25O15444 150 aa7.19□□□□□ -1.26
CDCA3-203ENST00000446553 GAS8-AS1O95177 125 aa7.19□□□□□ -1.26
CDCA3-203ENST00000446553 RAB5AP20339 215 aa7.19□□□□□ -1.26
CDCA3-203ENST00000446553 RPS10P46783 165 aaKnown RBP7.19□□□□□ -1.26
CDCA3-203ENST00000446553 FOXI1Q12951 378 aa7.19□□□□□ -1.26
CDCA3-203ENST00000446553 AMN1Q8IY45 258 aa7.19□□□□□ -1.26
CDCA3-203ENST00000446553 SPACA4Q8TDM5 124 aa7.19□□□□□ -1.26
CDCA3-203ENST00000446553 CDC42SE2Q9NRR3 84 aa7.19□□□□□ -1.26
CDCA3-203ENST00000446553 PKIGQ9Y2B9 76 aa7.19□□□□□ -1.26
CDCA3-203ENST00000446553 IGKV3OR2-268A0A0C4DH90 116 aa7.18□□□□□ -1.26
CDCA3-203ENST00000446553 LINC00959A0A1B0GUT2 108 aa7.18□□□□□ -1.26
CDCA3-203ENST00000446553 MT-ND6P03923 174 aa7.18□□□□□ -1.26
CDCA3-203ENST00000446553 RPL32P62910 135 aaKnown RBP7.18□□□□□ -1.26
CDCA3-203ENST00000446553 MRPL54Q6P161 138 aaKnown RBP7.18□□□□□ -1.26
CDCA3-203ENST00000446553 GNB1LQ9BYB4 327 aa7.18□□□□□ -1.26
CDCA3-203ENST00000446553 PLAC8Q9NZF1 115 aa7.18□□□□□ -1.26
CDCA3-203ENST00000446553 HMCN2Q8NDA2 5059 aa7.18□□□□□ -1.26
CDCA3-203ENST00000446553 A0A087WYN8 130 aa7.17□□□□□ -1.26
CDCA3-203ENST00000446553 IGHV1-58A0A0C4DH39 117 aa7.17□□□□□ -1.26
CDCA3-203ENST00000446553 TCAPO15273 167 aa7.17□□□□□ -1.26
CDCA3-203ENST00000446553 SUMO2P61956 95 aaKnown RBP7.17□□□□□ -1.26
CDCA3-203ENST00000446553 FAM104BQ5XKR9 115 aa7.17□□□□□ -1.26
CDCA3-203ENST00000446553 CD164L2Q6UWJ8 174 aa7.17□□□□□ -1.26
CDCA3-203ENST00000446553 ZNF664Q8N3J9 261 aa7.17□□□□□ -1.26
CDCA3-203ENST00000446553 NRACQ8N912 160 aa7.17□□□□□ -1.26
CDCA3-203ENST00000446553 KIR2DL4Q99706 377 aa7.17□□□□□ -1.26
CDCA3-203ENST00000446553 C20orf78Q9BR46 151 aa7.17□□□□□ -1.26
CDCA3-203ENST00000446553 CAMPP49913 170 aa7.16□□□□□ -1.26
CDCA3-203ENST00000446553 SS18Q15532 418 aa7.16□□□□□ -1.26
CDCA3-203ENST00000446553 TIMM21Q9BVV7 248 aa7.16□□□□□ -1.26
CDCA3-203ENST00000446553 C1orf196B1AJZ1 125 aa7.15□□□□□ -1.26
CDCA3-203ENST00000446553 FCER1GP30273 86 aa7.15□□□□□ -1.26
CDCA3-203ENST00000446553 XCL1P47992 114 aa7.15□□□□□ -1.26
CDCA3-203ENST00000446553 HIGD2BQ4VC39 106 aa7.15□□□□□ -1.26
CDCA3-203ENST00000446553 SERTAD4-AS1Q5TG53 156 aa7.15□□□□□ -1.26
CDCA3-203ENST00000446553 TMEM136Q6ZRR5 245 aa7.15□□□□□ -1.26
CDCA3-203ENST00000446553 TMEM18Q96B42 140 aa7.15□□□□□ -1.26
CDCA3-203ENST00000446553 LINC00474Q9P2X8 69 aa7.15□□□□□ -1.26
CDCA3-203ENST00000446553 PHOX2AO14813 284 aa7.14□□□□□ -1.27
CDCA3-203ENST00000446553 COX6A2Q02221 97 aa7.14□□□□□ -1.27
CDCA3-203ENST00000446553 MRPL51Q4U2R6 128 aaKnown RBP7.14□□□□□ -1.27
CDCA3-203ENST00000446553 Q6ZRU5 148 aa7.14□□□□□ -1.27
CDCA3-203ENST00000446553 DPH3Q96FX2 82 aa7.14□□□□□ -1.27
CDCA3-203ENST00000446553 UBE2D4Q9Y2X8 147 aa7.14□□□□□ -1.27
CDCA3-203ENST00000446553 TRAPPC1Q9Y5R8 145 aa7.14□□□□□ -1.27
CDCA3-203ENST00000446553 SMKR1H3BMG3 65 aa7.13□□□□□ -1.27
CDCA3-203ENST00000446553 PPBPP02775 128 aa7.13□□□□□ -1.27
CDCA3-203ENST00000446553 CHTF8P0CG12 524 aa7.13□□□□□ -1.27
CDCA3-203ENST00000446553 HNRNPA3P51991 378 aaKnown RBP7.13□□□□□ -1.27
CDCA3-203ENST00000446553 PRSS3P2Q8NHM4 247 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms