RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 TRBV12-3P01733 135 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 SMIM17P0DL12 118 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 EVI2AP22794 236 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 SNRPD3P62318 126 aaKnown RBP2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 SEC11AP67812 179 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 HSD52Q0P140 79 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 MPV17L2Q567V2 206 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 TMEM97Q5BJF2 176 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 UNQ9165/PRO28630Q6UXU0 137 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 APRG1Q8IVJ8 170 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 TEX29Q8N6K0 151 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 OR9G4Q8NGQ1 327 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 OR2K2Q8NGT1 345 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 MYOZ3Q8TDC0 251 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 RMI2Q96E14 147 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 TMEM208Q9BTX3 173 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 RHPN1-AS1Q9BWJ2 59 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 DPH3P1Q9H4G8 78 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 VPREB3Q9UKI3 123 aa2.38□□□□□ -2.03
HMGB3P6-201ENST00000444896 ZFHX3Q15911 3703 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 TACC2O95359 2948 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 ITPR1Q14643 2758 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 IGKV3-7A0A075B6H7 116 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 A8MUU9 505 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 H7C1H1 209 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 DPM2O94777 84 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 IGKCP01834 107 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 MGPP08493 103 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 LGALS1P09382 135 aaKnown RBP2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 HLA-DRB4P13762 266 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 PLNP26678 52 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 PSMB8P28062 276 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 RNASE4P34096 147 aaKnown RBP2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 SYNJ2BPP57105 145 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 BLCAPP62952 87 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 VAMP3Q15836 100 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 DEFB112Q30KQ8 113 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 BVES-AS1Q5T3Y7 98 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 PRR9Q5T870 116 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 GPHB5Q86YW7 130 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 DEFB125Q8N687 156 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 ZFAND2AQ8N6M9 145 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 C18orf15Q96N68 181 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 ODF3Q96PU9 254 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 C20orf78Q9BR46 151 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 SMIM2Q9BVW6 85 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 C8orf17Q9NRJ1 99 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 HLA-DRB4X5D2U9 266 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 ACACBO00763 2458 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 DCHS2Q6V1P9 2916 aa2.37□□□□□ -2.03
HMGB3P6-201ENST00000444896 MYO18BQ8IUG5 2567 aa2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 SPG11Q96JI7 2443 aa2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 TRAV12-1A0A0B4J245 112 aa2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 TRAV26-2A0A0B4J265 109 aa2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 C7orf71A4D174 169 aa2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 LGALS9O00182 355 aa2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 FXYD7P58549 80 aa2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 RNASE13Q5GAN3 156 aaKnown RBP2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 C2orf91Q6ZV80 131 aa2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 MRPL55Q7Z7F7 128 aaKnown RBP2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 BOD1L2Q8IYS8 172 aa2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 FAM19A4Q96LR4 140 aa2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 GEMIN7Q9H840 131 aaKnown RBP2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 CSMD1Q96PZ7 3565 aa2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 CREBBPQ92793 2442 aa2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 AKAP9Q99996 3911 aa2.36□□□□□ -2.03
HMGB3P6-201ENST00000444896 USP9XQ93008 2570 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 FAM208BQ5VWN6 2430 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 A0A087WX48 190 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 A0A096LNT2 108 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 TRAV2A0A0B4J234 112 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 TRAV12-3A0A0B4J271 114 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 OR11H12B2RN74 326 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 F8VRH5 84 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 H3BRM9 83 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 TAX1BP3O14907 124 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 OXTP01178 125 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 CD7P09564 240 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 ZNF688P0C7X2 276 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 FGF6P10767 208 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 DEFB113Q30KQ7 82 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 FOXI2Q6ZQN5 318 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 GTF2H5Q6ZYL4 71 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 TMEM86BQ8N661 226 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 OR11H1Q8NG94 326 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 OR11H2Q8NH07 326 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 DCANP1Q8TF63 244 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 TOMM6Q96B49 74 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 UBE2E2Q96LR5 201 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 SCGB3A1Q96QR1 104 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 HIGD1BQ9P298 99 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 CYSLTR1Q9Y271 337 aa2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 CHTOPQ9Y3Y2 248 aaKnown RBP2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 ANKRD17O75179 2603 aaKnown RBP2.35□□□□□ -2.03
HMGB3P6-201ENST00000444896 CSPG4Q6UVK1 2322 aa2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 IGSF10Q6WRI0 2623 aa2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 SMIM26A0A096LP01 95 aa2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 A0A0J9YX75 114 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms