RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 SYCNQ0VAF6 134 aa12.67□□□□□ -0.38
POLR2J3-202ENST00000443430 FAM231DQ6ZW35 169 aa12.67□□□□□ -0.38
POLR2J3-202ENST00000443430 SMIM15Q7Z3B0 74 aa12.67□□□□□ -0.38
POLR2J3-202ENST00000443430 ZNF664Q8N3J9 261 aa12.67□□□□□ -0.38
POLR2J3-202ENST00000443430 CNFNQ9BYD5 112 aa12.67□□□□□ -0.38
POLR2J3-202ENST00000443430 TRAV26-2A0A0B4J265 109 aa12.66□□□□□ -0.38
POLR2J3-202ENST00000443430 ZNF727A8MUV8 499 aa12.66□□□□□ -0.38
POLR2J3-202ENST00000443430 A8MWL6 223 aa12.66□□□□□ -0.38
POLR2J3-202ENST00000443430 CCL25O15444 150 aa12.66□□□□□ -0.38
POLR2J3-202ENST00000443430 NCR2O95944 276 aa12.66□□□□□ -0.38
POLR2J3-202ENST00000443430 PSORS1C2Q9UIG4 136 aa12.66□□□□□ -0.38
POLR2J3-202ENST00000443430 LINC00959A0A1B0GUT2 108 aa12.65□□□□□ -0.38
POLR2J3-202ENST00000443430 APCSP02743 223 aa12.65□□□□□ -0.38
POLR2J3-202ENST00000443430 SRP19P09132 144 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-202ENST00000443430 GAGE2BQ13066 116 aa12.65□□□□□ -0.38
POLR2J3-202ENST00000443430 LINC01551Q86U37 167 aa12.64□□□□□ -0.39
POLR2J3-202ENST00000443430 PRR26Q8N8Z3 221 aa12.64□□□□□ -0.39
POLR2J3-202ENST00000443430 RPL39LQ96EH5 51 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-202ENST00000443430 ZNF561-AS1K7EIQ3 104 aa12.63□□□□□ -0.39
POLR2J3-202ENST00000443430 ZNF25P17030 456 aaPredicted RBP12.63□□□□□ -0.39
POLR2J3-202ENST00000443430 FOXA3P55318 350 aaPredicted RBP12.63□□□□□ -0.39
POLR2J3-202ENST00000443430 BORCS7Q96B45 105 aa12.63□□□□□ -0.39
POLR2J3-202ENST00000443430 LOC107984640A0A0U1RRK4 108 aa12.62□□□□□ -0.39
POLR2J3-202ENST00000443430 MT-ND6P03923 174 aa12.62□□□□□ -0.39
POLR2J3-202ENST00000443430 CT83Q5H943 113 aa12.62□□□□□ -0.39
POLR2J3-202ENST00000443430 CAMPP49913 170 aa12.61□□□□□ -0.39
POLR2J3-202ENST00000443430 C9orf116Q5BN46 136 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-202ENST00000443430 C1orf137Q5JT78 98 aa12.6□□□□□ -0.39
POLR2J3-202ENST00000443430 CD164L2Q6UWJ8 174 aa12.6□□□□□ -0.39
POLR2J3-202ENST00000443430 BTF3L4Q96K17 158 aa12.6□□□□□ -0.39
POLR2J3-202ENST00000443430 SDHAF1A6NFY7 115 aa12.59□□□□□ -0.39
POLR2J3-202ENST00000443430 HIGD1CA8MV81 97 aa12.59□□□□□ -0.39
POLR2J3-202ENST00000443430 TSKUQ8WUA8 353 aa12.59□□□□□ -0.39
POLR2J3-202ENST00000443430 TMEM101Q96IK0 257 aa12.59□□□□□ -0.39
POLR2J3-202ENST00000443430 OSTCQ9NRP0 149 aa12.59□□□□□ -0.39
POLR2J3-202ENST00000443430 FAT4Q6V0I7 4981 aa12.58□□□□□ -0.4
POLR2J3-202ENST00000443430 IGLV4-69A0A075B6H9 119 aa12.58□□□□□ -0.4
POLR2J3-202ENST00000443430 SS18Q15532 418 aa12.58□□□□□ -0.4
POLR2J3-202ENST00000443430 ISOC2Q96AB3 205 aa12.58□□□□□ -0.4
POLR2J3-202ENST00000443430 A0A1B0GUT8 65 aa12.57□□□□□ -0.4
POLR2J3-202ENST00000443430 ESDP10768 282 aa12.57□□□□□ -0.4
POLR2J3-202ENST00000443430 TMEM241Q24JQ0 296 aa12.57□□□□□ -0.4
POLR2J3-202ENST00000443430 TEX261Q6UWH6 196 aa12.57□□□□□ -0.4
POLR2J3-202ENST00000443430 PHF5AQ7RTV0 110 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-202ENST00000443430 NUP35Q8NFH5 326 aa12.57□□□□□ -0.4
POLR2J3-202ENST00000443430 ADIRFQ15847 76 aa12.56□□□□□ -0.4
POLR2J3-202ENST00000443430 DIRC1Q969H9 104 aa12.56□□□□□ -0.4
POLR2J3-202ENST00000443430 CDC42SE2Q9NRR3 84 aa12.56□□□□□ -0.4
POLR2J3-202ENST00000443430 C9JQL5 133 aa12.55□□□□□ -0.4
POLR2J3-202ENST00000443430 I3L3M4 83 aa12.55□□□□□ -0.4
POLR2J3-202ENST00000443430 APOMO95445 188 aa12.55□□□□□ -0.4
POLR2J3-202ENST00000443430 PMCHP20382 165 aa12.55□□□□□ -0.4
POLR2J3-202ENST00000443430 FAM74A3Q4VXF1 159 aa12.55□□□□□ -0.4
POLR2J3-202ENST00000443430 V9GYV3 84 aa12.55□□□□□ -0.4
POLR2J3-202ENST00000443430 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-202ENST00000443430 IGLV7-43P04211 117 aa12.54□□□□□ -0.4
POLR2J3-202ENST00000443430 RPL23P62829 140 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-202ENST00000443430 SRSF3P84103 164 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-202ENST00000443430 PEA15Q15121 130 aa12.54□□□□□ -0.4
POLR2J3-202ENST00000443430 CAMK2N2Q96S95 79 aa12.53□□□□□ -0.4
POLR2J3-202ENST00000443430 NAT8Q9UHE5 227 aa12.53□□□□□ -0.4
POLR2J3-202ENST00000443430 A0A0U1RQV1 116 aa12.52□□□□□ -0.41
POLR2J3-202ENST00000443430 TSHBP01222 138 aa12.52□□□□□ -0.41
POLR2J3-202ENST00000443430 MRPL52Q86TS9 123 aaKnown RBP12.52□□□□□ -0.41
POLR2J3-202ENST00000443430 TMEM191AQ9H0A3 160 aa12.52□□□□□ -0.41
POLR2J3-202ENST00000443430 TRBV6-5A0A0K0K1A5 114 aa12.51□□□□□ -0.41
POLR2J3-202ENST00000443430 H0Y9J4 135 aa12.51□□□□□ -0.41
POLR2J3-202ENST00000443430 MALP21145 153 aa12.51□□□□□ -0.41
POLR2J3-202ENST00000443430 RIGQ13278 110 aa12.51□□□□□ -0.41
POLR2J3-202ENST00000443430 PRR4Q16378 134 aa12.51□□□□□ -0.41
POLR2J3-202ENST00000443430 AMN1Q8IY45 258 aa12.51□□□□□ -0.41
POLR2J3-202ENST00000443430 MRAP2Q96G30 205 aa12.51□□□□□ -0.41
POLR2J3-202ENST00000443430 RPL18AQ02543 176 aaKnown RBP12.5□□□□□ -0.41
POLR2J3-202ENST00000443430 C2orf48Q96LS8 159 aa12.5□□□□□ -0.41
POLR2J3-202ENST00000443430 ST20Q9HBF5 79 aa12.5□□□□□ -0.41
POLR2J3-202ENST00000443430 TMEM242Q9NWH2 141 aa12.5□□□□□ -0.41
POLR2J3-202ENST00000443430 IGLV1-50A0A075B6I6 118 aa12.49□□□□□ -0.41
POLR2J3-202ENST00000443430 COX7A2LO14548 114 aa12.49□□□□□ -0.41
POLR2J3-202ENST00000443430 KRTAP11-1Q8IUC1 163 aa12.49□□□□□ -0.41
POLR2J3-202ENST00000443430 OPRPNQ99935 248 aaPredicted RBP12.49□□□□□ -0.41
POLR2J3-202ENST00000443430 NAT8BQ9UHF3 227 aa12.49□□□□□ -0.41
POLR2J3-202ENST00000443430 KRTAP1-4P0C5Y4 121 aa12.48□□□□□ -0.41
POLR2J3-202ENST00000443430 RAB4AP20338 218 aa12.48□□□□□ -0.41
POLR2J3-202ENST00000443430 C1orf196B1AJZ1 125 aa12.47□□□□□ -0.41
POLR2J3-202ENST00000443430 SMKR1H3BMG3 65 aa12.47□□□□□ -0.41
POLR2J3-202ENST00000443430 SMDT1Q9H4I9 107 aa12.47□□□□□ -0.41
POLR2J3-202ENST00000443430 A0A087WZ39 114 aa12.46□□□□□ -0.41
POLR2J3-202ENST00000443430 LCE2AQ5TA79 106 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-202ENST00000443430 KRTAP9-6A0A140TA67 174 aa12.45□□□□□ -0.42
POLR2J3-202ENST00000443430 POLR2KP53803 58 aaKnown RBP12.45□□□□□ -0.42
POLR2J3-202ENST00000443430 RNF151Q2KHN1 245 aa12.45□□□□□ -0.42
POLR2J3-202ENST00000443430 SMIM27A0A1W2PRY6 76 aa12.44□□□□□ -0.42
POLR2J3-202ENST00000443430 C7orf77A4D0Y5 90 aa12.44□□□□□ -0.42
POLR2J3-202ENST00000443430 FAM168BA1KXE4 195 aa12.43□□□□□ -0.42
POLR2J3-202ENST00000443430 C5orf38Q86SI9 138 aa12.43□□□□□ -0.42
POLR2J3-202ENST00000443430 TRBV27A0A0K0K1C4 114 aa12.42□□□□□ -0.42
POLR2J3-202ENST00000443430 RNASE13Q5GAN3 156 aaKnown RBP12.42□□□□□ -0.42
POLR2J3-202ENST00000443430 FCER1GP30273 86 aa12.41□□□□□ -0.42
POLR2J3-202ENST00000443430 SPAG11BQ08648 103 aa12.41□□□□□ -0.42
POLR2J3-202ENST00000443430 MRPL51Q4U2R6 128 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms