RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 PEA15Q15121 130 aa12.02□□□□□ -0.49
CCDC78-204ENST00000439619 ADIRFQ15847 76 aa12.02□□□□□ -0.49
CCDC78-204ENST00000439619 NUP35Q8NFH5 326 aa12.02□□□□□ -0.49
CCDC78-204ENST00000439619 NAT8Q9UHE5 227 aa12.02□□□□□ -0.49
CCDC78-204ENST00000439619 GVQW2A0A096LPI5 108 aaPredicted RBP12.01□□□□□ -0.49
CCDC78-204ENST00000439619 PANO1I0J062 215 aa12.01□□□□□ -0.49
CCDC78-204ENST00000439619 MRPL52Q86TS9 123 aaKnown RBP12.01□□□□□ -0.49
CCDC78-204ENST00000439619 KIR2DL4Q99706 377 aa12.01□□□□□ -0.49
CCDC78-204ENST00000439619 LINC00959A0A1B0GUT2 108 aa12□□□□□ -0.49
CCDC78-204ENST00000439619 PPP1R2P9O14990 202 aa12□□□□□ -0.49
CCDC78-204ENST00000439619 CCL25O15444 150 aa12□□□□□ -0.49
CCDC78-204ENST00000439619 GAS8-AS1O95177 125 aa12□□□□□ -0.49
CCDC78-204ENST00000439619 RPL23P62829 140 aaKnown RBP12□□□□□ -0.49
CCDC78-204ENST00000439619 FOXI1Q12951 378 aa12□□□□□ -0.49
CCDC78-204ENST00000439619 SPACA4Q8TDM5 124 aa12□□□□□ -0.49
CCDC78-204ENST00000439619 SMDT1Q9H4I9 107 aa12□□□□□ -0.49
CCDC78-204ENST00000439619 A0A087WYN8 130 aa11.99□□□□□ -0.49
CCDC78-204ENST00000439619 A0A1B0GW15 77 aa11.99□□□□□ -0.49
CCDC78-204ENST00000439619 SUMO2P61956 95 aaKnown RBP11.99□□□□□ -0.49
CCDC78-204ENST00000439619 COX6A2Q02221 97 aa11.99□□□□□ -0.49
CCDC78-204ENST00000439619 ZNF664Q8N3J9 261 aa11.99□□□□□ -0.49
CCDC78-204ENST00000439619 C7orf33Q8WU49 177 aa11.99□□□□□ -0.49
CCDC78-204ENST00000439619 IGHV1-58A0A0C4DH39 117 aa11.98□□□□□ -0.49
CCDC78-204ENST00000439619 CHTF8P0CG12 524 aa11.98□□□□□ -0.49
CCDC78-204ENST00000439619 SERTAD4-AS1Q5TG53 156 aa11.98□□□□□ -0.49
CCDC78-204ENST00000439619 TMEM18Q96B42 140 aa11.98□□□□□ -0.49
CCDC78-204ENST00000439619 CDC42SE2Q9NRR3 84 aa11.98□□□□□ -0.49
CCDC78-204ENST00000439619 S100A8P05109 93 aa11.97□□□□□ -0.49
CCDC78-204ENST00000439619 CD164L2Q6UWJ8 174 aa11.97□□□□□ -0.49
CCDC78-204ENST00000439619 LINC00474Q9P2X8 69 aa11.97□□□□□ -0.49
CCDC78-204ENST00000439619 A0A1B0GVG6 124 aa11.96□□□□□ -0.49
CCDC78-204ENST00000439619 LINC00862A6NCI5 91 aa11.96□□□□□ -0.49
CCDC78-204ENST00000439619 SMKR1H3BMG3 65 aa11.96□□□□□ -0.49
CCDC78-204ENST00000439619 ZNF561-AS1K7EIQ3 104 aa11.96□□□□□ -0.49
CCDC78-204ENST00000439619 TCAPO15273 167 aa11.96□□□□□ -0.49
CCDC78-204ENST00000439619 MAJINQ3KP22 176 aa11.96□□□□□ -0.49
CCDC78-204ENST00000439619 IGKV2-24A0A0C4DH68 120 aa11.95□□□□□ -0.5
CCDC78-204ENST00000439619 SMIM27A0A1W2PRY6 76 aa11.95□□□□□ -0.5
CCDC78-204ENST00000439619 C1orf196B1AJZ1 125 aa11.95□□□□□ -0.5
CCDC78-204ENST00000439619 CAMPP49913 170 aa11.95□□□□□ -0.5
CCDC78-204ENST00000439619 FAM104BQ5XKR9 115 aa11.95□□□□□ -0.5
CCDC78-204ENST00000439619 PLAC8Q9NZF1 115 aa11.95□□□□□ -0.5
CCDC78-204ENST00000439619 CSDC2Q9Y534 153 aaKnown RBP11.95□□□□□ -0.5
CCDC78-204ENST00000439619 F8W036 122 aa11.94□□□□□ -0.5
CCDC78-204ENST00000439619 MALP21145 153 aa11.94□□□□□ -0.5
CCDC78-204ENST00000439619 CKS2P33552 79 aa11.94□□□□□ -0.5
CCDC78-204ENST00000439619 NRACQ8N912 160 aa11.94□□□□□ -0.5
CCDC78-204ENST00000439619 PRSS3P2Q8NHM4 247 aa11.94□□□□□ -0.5
CCDC78-204ENST00000439619 C20orf78Q9BR46 151 aa11.94□□□□□ -0.5
CCDC78-204ENST00000439619 MRPL51Q4U2R6 128 aaKnown RBP11.93□□□□□ -0.5
CCDC78-204ENST00000439619 CARD19Q96LW7 228 aa11.93□□□□□ -0.5
CCDC78-204ENST00000439619 C9JQL5 133 aa11.92□□□□□ -0.5
CCDC78-204ENST00000439619 COX7A2LO14548 114 aa11.92□□□□□ -0.5
CCDC78-204ENST00000439619 Q6ZRU5 148 aa11.92□□□□□ -0.5
CCDC78-204ENST00000439619 STPG4Q8N801 248 aa11.91□□□□□ -0.5
CCDC78-204ENST00000439619 UBE2D4Q9Y2X8 147 aa11.91□□□□□ -0.5
CCDC78-204ENST00000439619 TRBV24-1A0A075B6N3 115 aa11.9□□□□□ -0.5
CCDC78-204ENST00000439619 HNRNPA3P51991 378 aaKnown RBP11.9□□□□□ -0.5
CCDC78-204ENST00000439619 HBBP68871 147 aa11.9□□□□□ -0.5
CCDC78-204ENST00000439619 SRSF3P84103 164 aaKnown RBP11.9□□□□□ -0.5
CCDC78-204ENST00000439619 SYCNQ0VAF6 134 aa11.9□□□□□ -0.5
CCDC78-204ENST00000439619 TIMM21Q9BVV7 248 aa11.9□□□□□ -0.5
CCDC78-204ENST00000439619 TRAV13-1A0A0B4J241 112 aa11.89□□□□□ -0.51
CCDC78-204ENST00000439619 PHOX2AO14813 284 aa11.89□□□□□ -0.51
CCDC78-204ENST00000439619 RPL32P62910 135 aaKnown RBP11.89□□□□□ -0.51
CCDC78-204ENST00000439619 A0A096LNI7 61 aa11.88□□□□□ -0.51
CCDC78-204ENST00000439619 TNFRSF6BO95407 300 aa11.88□□□□□ -0.51
CCDC78-204ENST00000439619 APOMO95445 188 aa11.88□□□□□ -0.51
CCDC78-204ENST00000439619 PPBPP02775 128 aa11.88□□□□□ -0.51
CCDC78-204ENST00000439619 MRPL54Q6P161 138 aaKnown RBP11.88□□□□□ -0.51
CCDC78-204ENST00000439619 LINC00526Q96FQ7 95 aa11.88□□□□□ -0.51
CCDC78-204ENST00000439619 D6R8Y8 96 aa11.86□□□□□ -0.51
CCDC78-204ENST00000439619 RNASE13Q5GAN3 156 aaKnown RBP11.86□□□□□ -0.51
CCDC78-204ENST00000439619 SMIM2Q9BVW6 85 aa11.86□□□□□ -0.51
CCDC78-204ENST00000439619 ATP5L2Q7Z4Y8 100 aa11.85□□□□□ -0.51
CCDC78-204ENST00000439619 CAMK2N2Q96S95 79 aa11.85□□□□□ -0.51
CCDC78-204ENST00000439619 SPANXA1Q9NS26 97 aa11.85□□□□□ -0.51
CCDC78-204ENST00000439619 IGLV4-69A0A075B6H9 119 aa11.84□□□□□ -0.51
CCDC78-204ENST00000439619 LOC107984640A0A0U1RRK4 108 aa11.84□□□□□ -0.51
CCDC78-204ENST00000439619 RAB5AP20339 215 aa11.84□□□□□ -0.51
CCDC78-204ENST00000439619 Q6ZUT4 128 aa11.84□□□□□ -0.51
CCDC78-204ENST00000439619 A0A1B0GXF2 115 aa11.83□□□□□ -0.52
CCDC78-204ENST00000439619 RAB14P61106 215 aa11.83□□□□□ -0.52
CCDC78-204ENST00000439619 ORMDL3Q8N138 153 aa11.83□□□□□ -0.52
CCDC78-204ENST00000439619 C5orf38Q86SI9 138 aa11.82□□□□□ -0.52
CCDC78-204ENST00000439619 C2orf48Q96LS8 159 aa11.82□□□□□ -0.52
CCDC78-204ENST00000439619 PLA2G2DQ9UNK4 145 aa11.82□□□□□ -0.52
CCDC78-204ENST00000439619 NPYP01303 97 aa11.81□□□□□ -0.52
CCDC78-204ENST00000439619 RPL39P62891 51 aaKnown RBP11.81□□□□□ -0.52
CCDC78-204ENST00000439619 PRR3P79522 188 aaKnown RBP11.81□□□□□ -0.52
CCDC78-204ENST00000439619 PNRC1Q12796 327 aaPredicted RBP11.81□□□□□ -0.52
CCDC78-204ENST00000439619 GAGE2BQ13066 116 aa11.81□□□□□ -0.52
CCDC78-204ENST00000439619 TMEM136Q6ZRR5 245 aa11.81□□□□□ -0.52
CCDC78-204ENST00000439619 PTTG1IPP53801 180 aa11.8□□□□□ -0.52
CCDC78-204ENST00000439619 MRPS36P82909 103 aaKnown RBP11.8□□□□□ -0.52
CCDC78-204ENST00000439619 OR10D4PQ8NGN7 298 aa11.8□□□□□ -0.52
CCDC78-204ENST00000439619 LRP1Q07954 4544 aaKnown RBP11.79□□□□□ -0.52
CCDC78-204ENST00000439619 IFITM10A6NMD0 228 aa11.79□□□□□ -0.52
CCDC78-204ENST00000439619 MT-ND4LP03901 98 aa11.79□□□□□ -0.52
CCDC78-204ENST00000439619 IFI27P40305 119 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms