RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 TMEM101Q96IK0 257 aa12.9□□□□□ -0.34
NCKIPSD-206ENST00000439518 LINC00959A0A1B0GUT2 108 aa12.89□□□□□ -0.35
NCKIPSD-206ENST00000439518 C9JQL5 133 aa12.89□□□□□ -0.35
NCKIPSD-206ENST00000439518 RIGQ13278 110 aa12.89□□□□□ -0.35
NCKIPSD-206ENST00000439518 RPL23P62829 140 aaKnown RBP12.88□□□□□ -0.35
NCKIPSD-206ENST00000439518 DPH3Q96FX2 82 aa12.88□□□□□ -0.35
NCKIPSD-206ENST00000439518 CDC42SE2Q9NRR3 84 aa12.88□□□□□ -0.35
NCKIPSD-206ENST00000439518 FAT3Q8TDW7 4589 aa12.88□□□□□ -0.35
NCKIPSD-206ENST00000439518 PKHD1L1Q86WI1 4243 aa12.87□□□□□ -0.35
NCKIPSD-206ENST00000439518 SMKR1H3BMG3 65 aa12.87□□□□□ -0.35
NCKIPSD-206ENST00000439518 XCL1P47992 114 aa12.87□□□□□ -0.35
NCKIPSD-206ENST00000439518 COX6A2Q02221 97 aa12.87□□□□□ -0.35
NCKIPSD-206ENST00000439518 PLAC8Q9NZF1 115 aa12.87□□□□□ -0.35
NCKIPSD-206ENST00000439518 VCYO14598 125 aa12.86□□□□□ -0.35
NCKIPSD-206ENST00000439518 CCL25O15444 150 aa12.86□□□□□ -0.35
NCKIPSD-206ENST00000439518 NRACQ8N912 160 aa12.86□□□□□ -0.35
NCKIPSD-206ENST00000439518 PRSS3P2Q8NHM4 247 aa12.86□□□□□ -0.35
NCKIPSD-206ENST00000439518 NAT8BQ9UHF3 227 aa12.86□□□□□ -0.35
NCKIPSD-206ENST00000439518 C7orf77A4D0Y5 90 aa12.85□□□□□ -0.35
NCKIPSD-206ENST00000439518 PPP1R17O96001 155 aa12.84□□□□□ -0.35
NCKIPSD-206ENST00000439518 SRSF3P84103 164 aaKnown RBP12.84□□□□□ -0.35
NCKIPSD-206ENST00000439518 ADIRFQ15847 76 aa12.84□□□□□ -0.35
NCKIPSD-206ENST00000439518 ZNF664Q8N3J9 261 aa12.84□□□□□ -0.35
NCKIPSD-206ENST00000439518 NAT8Q9UHE5 227 aa12.84□□□□□ -0.35
NCKIPSD-206ENST00000439518 SMIM27A0A1W2PRY6 76 aa12.83□□□□□ -0.36
NCKIPSD-206ENST00000439518 SUMO2P61956 95 aaKnown RBP12.83□□□□□ -0.36
NCKIPSD-206ENST00000439518 SS18Q15532 418 aa12.83□□□□□ -0.36
NCKIPSD-206ENST00000439518 IGHV1-58A0A0C4DH39 117 aa12.82□□□□□ -0.36
NCKIPSD-206ENST00000439518 FCER1GP30273 86 aa12.82□□□□□ -0.36
NCKIPSD-206ENST00000439518 SERTAD4-AS1Q5TG53 156 aa12.82□□□□□ -0.36
NCKIPSD-206ENST00000439518 FAM104BQ5XKR9 115 aa12.82□□□□□ -0.36
NCKIPSD-206ENST00000439518 CD164L2Q6UWJ8 174 aa12.82□□□□□ -0.36
NCKIPSD-206ENST00000439518 CSDC2Q9Y534 153 aaKnown RBP12.82□□□□□ -0.36
NCKIPSD-206ENST00000439518 PEA15Q15121 130 aa12.81□□□□□ -0.36
NCKIPSD-206ENST00000439518 MRPL51Q4U2R6 128 aaKnown RBP12.81□□□□□ -0.36
NCKIPSD-206ENST00000439518 MAJINQ3KP22 176 aa12.8□□□□□ -0.36
NCKIPSD-206ENST00000439518 KIR2DL4Q99706 377 aa12.8□□□□□ -0.36
NCKIPSD-206ENST00000439518 SMDT1Q9H4I9 107 aa12.8□□□□□ -0.36
NCKIPSD-206ENST00000439518 A0A096LNI7 61 aa12.79□□□□□ -0.36
NCKIPSD-206ENST00000439518 IGKV2-24A0A0C4DH68 120 aa12.79□□□□□ -0.36
NCKIPSD-206ENST00000439518 A0A1B0GW15 77 aa12.79□□□□□ -0.36
NCKIPSD-206ENST00000439518 PPP1R2P9O14990 202 aa12.79□□□□□ -0.36
NCKIPSD-206ENST00000439518 Q6ZRU5 148 aa12.79□□□□□ -0.36
NCKIPSD-206ENST00000439518 LINC00526Q96FQ7 95 aa12.79□□□□□ -0.36
NCKIPSD-206ENST00000439518 UBE2D4Q9Y2X8 147 aa12.79□□□□□ -0.36
NCKIPSD-206ENST00000439518 TRBV24-1A0A075B6N3 115 aa12.78□□□□□ -0.36
NCKIPSD-206ENST00000439518 LINC00862A6NCI5 91 aa12.78□□□□□ -0.36
NCKIPSD-206ENST00000439518 PHOX2AO14813 284 aa12.78□□□□□ -0.36
NCKIPSD-206ENST00000439518 CAMPP49913 170 aa12.78□□□□□ -0.36
NCKIPSD-206ENST00000439518 C1orf196B1AJZ1 125 aa12.77□□□□□ -0.37
NCKIPSD-206ENST00000439518 RPL32P62910 135 aaKnown RBP12.77□□□□□ -0.37
NCKIPSD-206ENST00000439518 SMAGPQ0VAQ4 97 aa12.77□□□□□ -0.37
NCKIPSD-206ENST00000439518 STPG4Q8N801 248 aa12.77□□□□□ -0.37
NCKIPSD-206ENST00000439518 C7orf33Q8WU49 177 aa12.77□□□□□ -0.37
NCKIPSD-206ENST00000439518 C20orf78Q9BR46 151 aa12.77□□□□□ -0.37
NCKIPSD-206ENST00000439518 MT1HL1P0DM35 61 aa12.76□□□□□ -0.37
NCKIPSD-206ENST00000439518 CARD19Q96LW7 228 aa12.76□□□□□ -0.37
NCKIPSD-206ENST00000439518 TIMM21Q9BVV7 248 aa12.76□□□□□ -0.37
NCKIPSD-206ENST00000439518 HMCN2Q8NDA2 5059 aa12.76□□□□□ -0.37
NCKIPSD-206ENST00000439518 CKS2P33552 79 aa12.75□□□□□ -0.37
NCKIPSD-206ENST00000439518 SYCNQ0VAF6 134 aa12.75□□□□□ -0.37
NCKIPSD-206ENST00000439518 RNASE13Q5GAN3 156 aaKnown RBP12.75□□□□□ -0.37
NCKIPSD-206ENST00000439518 LINC00474Q9P2X8 69 aa12.75□□□□□ -0.37
NCKIPSD-206ENST00000439518 PKIGQ9Y2B9 76 aa12.75□□□□□ -0.37
NCKIPSD-206ENST00000439518 A0A1B0GXF2 115 aa12.74□□□□□ -0.37
NCKIPSD-206ENST00000439518 ZNF561-AS1K7EIQ3 104 aa12.74□□□□□ -0.37
NCKIPSD-206ENST00000439518 COX7A2LO14548 114 aa12.73□□□□□ -0.37
NCKIPSD-206ENST00000439518 TNFRSF6BO95407 300 aa12.73□□□□□ -0.37
NCKIPSD-206ENST00000439518 Q6ZUT4 128 aa12.73□□□□□ -0.37
NCKIPSD-206ENST00000439518 TRAV13-1A0A0B4J241 112 aa12.72□□□□□ -0.37
NCKIPSD-206ENST00000439518 S100A8P05109 93 aa12.72□□□□□ -0.37
NCKIPSD-206ENST00000439518 HBBP68871 147 aa12.72□□□□□ -0.37
NCKIPSD-206ENST00000439518 MRPL54Q6P161 138 aaKnown RBP12.72□□□□□ -0.37
NCKIPSD-206ENST00000439518 TMEM18Q96B42 140 aa12.72□□□□□ -0.37
NCKIPSD-206ENST00000439518 F8W036 122 aa12.71□□□□□ -0.37
NCKIPSD-206ENST00000439518 TCAPO15273 167 aa12.71□□□□□ -0.37
NCKIPSD-206ENST00000439518 MALP21145 153 aa12.71□□□□□ -0.37
NCKIPSD-206ENST00000439518 FAM104AQ969W3 186 aa12.71□□□□□ -0.37
NCKIPSD-206ENST00000439518 SMIM2Q9BVW6 85 aa12.71□□□□□ -0.37
NCKIPSD-206ENST00000439518 IGLV4-69A0A075B6H9 119 aa12.7□□□□□ -0.38
NCKIPSD-206ENST00000439518 D6R8Y8 96 aa12.7□□□□□ -0.38
NCKIPSD-206ENST00000439518 RPL39P62891 51 aaKnown RBP12.7□□□□□ -0.38
NCKIPSD-206ENST00000439518 PRR3P79522 188 aaKnown RBP12.7□□□□□ -0.38
NCKIPSD-206ENST00000439518 NPYP01303 97 aa12.69□□□□□ -0.38
NCKIPSD-206ENST00000439518 PPBPP02775 128 aa12.68□□□□□ -0.38
NCKIPSD-206ENST00000439518 C5orf38Q86SI9 138 aa12.68□□□□□ -0.38
NCKIPSD-206ENST00000439518 PTTG1IPP53801 180 aa12.67□□□□□ -0.38
NCKIPSD-206ENST00000439518 C2orf48Q96LS8 159 aa12.67□□□□□ -0.38
NCKIPSD-206ENST00000439518 SPANXA1Q9NS26 97 aa12.67□□□□□ -0.38
NCKIPSD-206ENST00000439518 PLA2G2DQ9UNK4 145 aa12.67□□□□□ -0.38
NCKIPSD-206ENST00000439518 LOC107984640A0A0U1RRK4 108 aa12.66□□□□□ -0.38
NCKIPSD-206ENST00000439518 CAMK2N2Q96S95 79 aa12.66□□□□□ -0.38
NCKIPSD-206ENST00000439518 MRPS36P82909 103 aaKnown RBP12.65□□□□□ -0.38
NCKIPSD-206ENST00000439518 ATP5L2Q7Z4Y8 100 aa12.65□□□□□ -0.38
NCKIPSD-206ENST00000439518 OPRPNQ99935 248 aaPredicted RBP12.65□□□□□ -0.38
NCKIPSD-206ENST00000439518 APOMO95445 188 aa12.64□□□□□ -0.39
NCKIPSD-206ENST00000439518 ORMDL3Q8N138 153 aa12.64□□□□□ -0.39
NCKIPSD-206ENST00000439518 IGHV3OR16-9A0A0B4J2B5 98 aa12.63□□□□□ -0.39
NCKIPSD-206ENST00000439518 GAGE2BQ13066 116 aa12.63□□□□□ -0.39
NCKIPSD-206ENST00000439518 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms