RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 TEX261Q6UWH6 196 aa6.79□□□□□ -1.32
SPTLC1P4-201ENST00000435997 CARD19Q96LW7 228 aa6.79□□□□□ -1.32
SPTLC1P4-201ENST00000435997 PKIGQ9Y2B9 76 aa6.79□□□□□ -1.32
SPTLC1P4-201ENST00000435997 IGHV1-58A0A0C4DH39 117 aa6.78□□□□□ -1.32
SPTLC1P4-201ENST00000435997 LINC00959A0A1B0GUT2 108 aa6.78□□□□□ -1.32
SPTLC1P4-201ENST00000435997 I3L3M4 83 aa6.78□□□□□ -1.32
SPTLC1P4-201ENST00000435997 TAGLN2P37802 199 aaKnown RBP6.78□□□□□ -1.32
SPTLC1P4-201ENST00000435997 LYPD6BQ8NI32 183 aa6.78□□□□□ -1.32
SPTLC1P4-201ENST00000435997 OCC1Q8TAD7 63 aa6.78□□□□□ -1.32
SPTLC1P4-201ENST00000435997 CCL25O15444 150 aa6.77□□□□□ -1.33
SPTLC1P4-201ENST00000435997 GAS8-AS1O95177 125 aa6.77□□□□□ -1.33
SPTLC1P4-201ENST00000435997 TSHBP01222 138 aa6.77□□□□□ -1.33
SPTLC1P4-201ENST00000435997 REG3GQ6UW15 175 aa6.77□□□□□ -1.33
SPTLC1P4-201ENST00000435997 Q6ZRP5 223 aa6.77□□□□□ -1.33
SPTLC1P4-201ENST00000435997 MRPL52Q86TS9 123 aaKnown RBP6.77□□□□□ -1.33
SPTLC1P4-201ENST00000435997 KRTAP19-1Q8IUB9 90 aa6.77□□□□□ -1.33
SPTLC1P4-201ENST00000435997 LINC00526Q96FQ7 95 aa6.77□□□□□ -1.33
SPTLC1P4-201ENST00000435997 FAM210AQ96ND0 272 aa6.77□□□□□ -1.33
SPTLC1P4-201ENST00000435997 PTTG1IPP53801 180 aa6.76□□□□□ -1.33
SPTLC1P4-201ENST00000435997 CT83Q5H943 113 aa6.76□□□□□ -1.33
SPTLC1P4-201ENST00000435997 CD164L2Q6UWJ8 174 aa6.76□□□□□ -1.33
SPTLC1P4-201ENST00000435997 FAM231DQ6ZW35 169 aa6.76□□□□□ -1.33
SPTLC1P4-201ENST00000435997 SMIM15Q7Z3B0 74 aa6.76□□□□□ -1.33
SPTLC1P4-201ENST00000435997 MRAP2Q96G30 205 aa6.76□□□□□ -1.33
SPTLC1P4-201ENST00000435997 CDC42SE2Q9NRR3 84 aa6.76□□□□□ -1.33
SPTLC1P4-201ENST00000435997 TMEM242Q9NWH2 141 aa6.76□□□□□ -1.33
SPTLC1P4-201ENST00000435997 TRBV27A0A0K0K1C4 114 aa6.75□□□□□ -1.33
SPTLC1P4-201ENST00000435997 POLR2KP53803 58 aaKnown RBP6.75□□□□□ -1.33
SPTLC1P4-201ENST00000435997 BTF3L4Q96K17 158 aa6.75□□□□□ -1.33
SPTLC1P4-201ENST00000435997 TMEM250H0YL14 139 aa6.74□□□□□ -1.33
SPTLC1P4-201ENST00000435997 PMCHP20382 165 aa6.74□□□□□ -1.33
SPTLC1P4-201ENST00000435997 CAMPP49913 170 aa6.74□□□□□ -1.33
SPTLC1P4-201ENST00000435997 SYCNQ0VAF6 134 aa6.74□□□□□ -1.33
SPTLC1P4-201ENST00000435997 SLC51BQ86UW2 128 aa6.74□□□□□ -1.33
SPTLC1P4-201ENST00000435997 TCTE3Q8IZS6 198 aa6.74□□□□□ -1.33
SPTLC1P4-201ENST00000435997 TMEM101Q96IK0 257 aa6.74□□□□□ -1.33
SPTLC1P4-201ENST00000435997 C7orf77A4D0Y5 90 aa6.73□□□□□ -1.33
SPTLC1P4-201ENST00000435997 A8MWL6 223 aa6.73□□□□□ -1.33
SPTLC1P4-201ENST00000435997 SS18Q15532 418 aa6.73□□□□□ -1.33
SPTLC1P4-201ENST00000435997 ZNF664Q8N3J9 261 aa6.73□□□□□ -1.33
SPTLC1P4-201ENST00000435997 KRTAP4-7Q9BYR0 210 aa6.73□□□□□ -1.33
SPTLC1P4-201ENST00000435997 TMEM191AQ9H0A3 160 aa6.73□□□□□ -1.33
SPTLC1P4-201ENST00000435997 ST20Q9HBF5 79 aa6.73□□□□□ -1.33
SPTLC1P4-201ENST00000435997 CSDC2Q9Y534 153 aaKnown RBP6.73□□□□□ -1.33
SPTLC1P4-201ENST00000435997 A0A1W2PNN7 141 aa6.72□□□□□ -1.33
SPTLC1P4-201ENST00000435997 ZNF561-AS1K7EIQ3 104 aa6.72□□□□□ -1.33
SPTLC1P4-201ENST00000435997 GATCO43716 136 aaKnown RBP6.72□□□□□ -1.33
SPTLC1P4-201ENST00000435997 NUP35Q8NFH5 326 aa6.72□□□□□ -1.33
SPTLC1P4-201ENST00000435997 IGLV4-69A0A075B6H9 119 aa6.71□□□□□ -1.34
SPTLC1P4-201ENST00000435997 LOC107984640A0A0U1RRK4 108 aa6.71□□□□□ -1.34
SPTLC1P4-201ENST00000435997 A0A1B0GUT8 65 aa6.71□□□□□ -1.34
SPTLC1P4-201ENST00000435997 HIGD1CA8MV81 97 aa6.71□□□□□ -1.34
SPTLC1P4-201ENST00000435997 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.71□□□□□ -1.34
SPTLC1P4-201ENST00000435997 APOMO95445 188 aa6.71□□□□□ -1.34
SPTLC1P4-201ENST00000435997 RAB4AP20338 218 aa6.71□□□□□ -1.34
SPTLC1P4-201ENST00000435997 C4orf48Q5BLP8 95 aa6.71□□□□□ -1.34
SPTLC1P4-201ENST00000435997 TSKUQ8WUA8 353 aa6.71□□□□□ -1.34
SPTLC1P4-201ENST00000435997 ISOC2Q96AB3 205 aa6.71□□□□□ -1.34
SPTLC1P4-201ENST00000435997 UBE2D4Q9Y2X8 147 aa6.71□□□□□ -1.34
SPTLC1P4-201ENST00000435997 COX7A2LO14548 114 aa6.7□□□□□ -1.34
SPTLC1P4-201ENST00000435997 GAGE2BQ13066 116 aa6.7□□□□□ -1.34
SPTLC1P4-201ENST00000435997 LINC01551Q86U37 167 aa6.7□□□□□ -1.34
SPTLC1P4-201ENST00000435997 AMN1Q8IY45 258 aa6.7□□□□□ -1.34
SPTLC1P4-201ENST00000435997 NRACQ8N912 160 aa6.7□□□□□ -1.34
SPTLC1P4-201ENST00000435997 C2orf48Q96LS8 159 aa6.7□□□□□ -1.34
SPTLC1P4-201ENST00000435997 PSORS1C2Q9UIG4 136 aa6.7□□□□□ -1.34
SPTLC1P4-201ENST00000435997 RNF213Q63HN8 5207 aa6.7□□□□□ -1.34
SPTLC1P4-201ENST00000435997 C1orf196B1AJZ1 125 aa6.69□□□□□ -1.34
SPTLC1P4-201ENST00000435997 C9orf116Q5BN46 136 aaPredicted RBP6.69□□□□□ -1.34
SPTLC1P4-201ENST00000435997 SUMO2P61956 95 aaKnown RBP6.68□□□□□ -1.34
SPTLC1P4-201ENST00000435997 Q6ZUT4 128 aa6.68□□□□□ -1.34
SPTLC1P4-201ENST00000435997 BORCS7Q96B45 105 aa6.68□□□□□ -1.34
SPTLC1P4-201ENST00000435997 CAMK2N2Q96S95 79 aa6.68□□□□□ -1.34
SPTLC1P4-201ENST00000435997 SMKR1H3BMG3 65 aa6.67□□□□□ -1.34
SPTLC1P4-201ENST00000435997 VCYO14598 125 aa6.67□□□□□ -1.34
SPTLC1P4-201ENST00000435997 MALP21145 153 aa6.67□□□□□ -1.34
SPTLC1P4-201ENST00000435997 RNASE13Q5GAN3 156 aaKnown RBP6.67□□□□□ -1.34
SPTLC1P4-201ENST00000435997 FAM104AQ969W3 186 aa6.67□□□□□ -1.34
SPTLC1P4-201ENST00000435997 TIMM21Q9BVV7 248 aa6.67□□□□□ -1.34
SPTLC1P4-201ENST00000435997 OSTCQ9NRP0 149 aa6.67□□□□□ -1.34
SPTLC1P4-201ENST00000435997 V9GYV3 84 aa6.67□□□□□ -1.34
SPTLC1P4-201ENST00000435997 LPAP08519 4548 aa6.67□□□□□ -1.34
SPTLC1P4-201ENST00000435997 TRAV13-1A0A0B4J241 112 aa6.66□□□□□ -1.34
SPTLC1P4-201ENST00000435997 PPP1R17O96001 155 aa6.66□□□□□ -1.34
SPTLC1P4-201ENST00000435997 FCER1GP30273 86 aa6.66□□□□□ -1.34
SPTLC1P4-201ENST00000435997 RPL18AQ02543 176 aaKnown RBP6.66□□□□□ -1.34
SPTLC1P4-201ENST00000435997 SPAG11BQ08648 103 aa6.66□□□□□ -1.34
SPTLC1P4-201ENST00000435997 RNF151Q2KHN1 245 aa6.66□□□□□ -1.34
SPTLC1P4-201ENST00000435997 LCE1DQ5T752 114 aa6.66□□□□□ -1.34
SPTLC1P4-201ENST00000435997 PHF5AQ7RTV0 110 aaKnown RBP6.66□□□□□ -1.34
SPTLC1P4-201ENST00000435997 SMIM7Q9BQ49 75 aa6.66□□□□□ -1.34
SPTLC1P4-201ENST00000435997 MRPL35Q9NZE8 188 aaKnown RBP6.66□□□□□ -1.34
SPTLC1P4-201ENST00000435997 MT-ND6P03923 174 aa6.65□□□□□ -1.34
SPTLC1P4-201ENST00000435997 RPL32P62910 135 aaKnown RBP6.65□□□□□ -1.34
SPTLC1P4-201ENST00000435997 BLOC1S1P78537 153 aa6.65□□□□□ -1.34
SPTLC1P4-201ENST00000435997 SMAGPQ0VAQ4 97 aa6.65□□□□□ -1.34
SPTLC1P4-201ENST00000435997 C1orf137Q5JT78 98 aa6.65□□□□□ -1.34
SPTLC1P4-201ENST00000435997 ALKAL2Q6UX46 152 aa6.65□□□□□ -1.34
SPTLC1P4-201ENST00000435997 C5orf38Q86SI9 138 aa6.65□□□□□ -1.34
SPTLC1P4-201ENST00000435997 OR10D4PQ8NGN7 298 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms