RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 TSHBP01222 138 aa10.17□□□□□ -0.78
ACTB-205ENST00000432588 PRR3P79522 188 aaKnown RBP10.17□□□□□ -0.78
ACTB-205ENST00000432588 ALKAL2Q6UX46 152 aa10.17□□□□□ -0.78
ACTB-205ENST00000432588 LYPD6BQ8NI32 183 aa10.17□□□□□ -0.78
ACTB-205ENST00000432588 TSKUQ8WUA8 353 aa10.17□□□□□ -0.78
ACTB-205ENST00000432588 TMEM191AQ9H0A3 160 aa10.17□□□□□ -0.78
ACTB-205ENST00000432588 HIGD1CA8MV81 97 aa10.16□□□□□ -0.78
ACTB-205ENST00000432588 ZNF561-AS1K7EIQ3 104 aa10.16□□□□□ -0.78
ACTB-205ENST00000432588 MRPL52Q86TS9 123 aaKnown RBP10.16□□□□□ -0.78
ACTB-205ENST00000432588 CARD19Q96LW7 228 aa10.16□□□□□ -0.78
ACTB-205ENST00000432588 SMIM7Q9BQ49 75 aa10.16□□□□□ -0.78
ACTB-205ENST00000432588 C7orf77A4D0Y5 90 aa10.15□□□□□ -0.78
ACTB-205ENST00000432588 GAS8-AS1O95177 125 aa10.15□□□□□ -0.78
ACTB-205ENST00000432588 CD164L2Q6UWJ8 174 aa10.15□□□□□ -0.78
ACTB-205ENST00000432588 ZNF664Q8N3J9 261 aa10.15□□□□□ -0.78
ACTB-205ENST00000432588 EIF5A2Q9GZV4 153 aaKnown RBP10.15□□□□□ -0.78
ACTB-205ENST00000432588 CDC42SE2Q9NRR3 84 aa10.15□□□□□ -0.78
ACTB-205ENST00000432588 TRBV27A0A0K0K1C4 114 aa10.14□□□□□ -0.79
ACTB-205ENST00000432588 RAB4AP20338 218 aa10.14□□□□□ -0.79
ACTB-205ENST00000432588 FCER1GP30273 86 aa10.14□□□□□ -0.79
ACTB-205ENST00000432588 POLR2KP53803 58 aaKnown RBP10.14□□□□□ -0.79
ACTB-205ENST00000432588 SMAGPQ0VAQ4 97 aa10.14□□□□□ -0.79
ACTB-205ENST00000432588 LINC01551Q86U37 167 aa10.14□□□□□ -0.79
ACTB-205ENST00000432588 AKAP14Q86UN6 197 aa10.14□□□□□ -0.79
ACTB-205ENST00000432588 LINC00526Q96FQ7 95 aa10.14□□□□□ -0.79
ACTB-205ENST00000432588 PPP1R17O96001 155 aa10.13□□□□□ -0.79
ACTB-205ENST00000432588 SYCNQ0VAF6 134 aa10.13□□□□□ -0.79
ACTB-205ENST00000432588 LINC01600Q96MT4 127 aa10.13□□□□□ -0.79
ACTB-205ENST00000432588 OSTCQ9NRP0 149 aa10.13□□□□□ -0.79
ACTB-205ENST00000432588 ZNF727A8MUV8 499 aa10.12□□□□□ -0.79
ACTB-205ENST00000432588 VCYO14598 125 aa10.12□□□□□ -0.79
ACTB-205ENST00000432588 AMN1Q8IY45 258 aa10.12□□□□□ -0.79
ACTB-205ENST00000432588 ISOC2Q96AB3 205 aa10.12□□□□□ -0.79
ACTB-205ENST00000432588 C1orf196B1AJZ1 125 aa10.11□□□□□ -0.79
ACTB-205ENST00000432588 MALP21145 153 aa10.11□□□□□ -0.79
ACTB-205ENST00000432588 CAMPP49913 170 aa10.11□□□□□ -0.79
ACTB-205ENST00000432588 RIGQ13278 110 aa10.11□□□□□ -0.79
ACTB-205ENST00000432588 REG3GQ6UW15 175 aa10.11□□□□□ -0.79
ACTB-205ENST00000432588 TNXBP22105 4242 aa10.1□□□□□ -0.79
ACTB-205ENST00000432588 SPINK6Q6UWN8 80 aa10.1□□□□□ -0.79
ACTB-205ENST00000432588 Q6ZRP5 223 aa10.1□□□□□ -0.79
ACTB-205ENST00000432588 KIR2DL4Q99706 377 aa10.1□□□□□ -0.79
ACTB-205ENST00000432588 CSDC2Q9Y534 153 aaKnown RBP10.1□□□□□ -0.79
ACTB-205ENST00000432588 LOC107984640A0A0U1RRK4 108 aa10.09□□□□□ -0.79
ACTB-205ENST00000432588 COX7A2LO14548 114 aa10.09□□□□□ -0.79
ACTB-205ENST00000432588 SMKR1H3BMG3 65 aa10.08□□□□□ -0.8
ACTB-205ENST00000432588 PPP1R2P9O14990 202 aa10.08□□□□□ -0.8
ACTB-205ENST00000432588 PTTG1IPP53801 180 aa10.08□□□□□ -0.8
ACTB-205ENST00000432588 SUMO2P61956 95 aaKnown RBP10.08□□□□□ -0.8
ACTB-205ENST00000432588 IGLV4-69A0A075B6H9 119 aa10.07□□□□□ -0.8
ACTB-205ENST00000432588 A0A0J9YXV3 536 aa10.07□□□□□ -0.8
ACTB-205ENST00000432588 GAGE2BQ13066 116 aa10.07□□□□□ -0.8
ACTB-205ENST00000432588 NUP35Q8NFH5 326 aa10.07□□□□□ -0.8
ACTB-205ENST00000432588 TMEM18Q96B42 140 aa10.07□□□□□ -0.8
ACTB-205ENST00000432588 NAT8BQ9UHF3 227 aa10.07□□□□□ -0.8
ACTB-205ENST00000432588 UBE2D4Q9Y2X8 147 aa10.07□□□□□ -0.8
ACTB-205ENST00000432588 V9GYV3 84 aa10.07□□□□□ -0.8
ACTB-205ENST00000432588 TRAV13-1A0A0B4J241 112 aa10.06□□□□□ -0.8
ACTB-205ENST00000432588 SRP19P09132 144 aaKnown RBP10.06□□□□□ -0.8
ACTB-205ENST00000432588 NRACQ8N912 160 aa10.06□□□□□ -0.8
ACTB-205ENST00000432588 CAMK2N2Q96S95 79 aa10.06□□□□□ -0.8
ACTB-205ENST00000432588 hCG_2014768A0A024R1R8 64 aa10.05□□□□□ -0.8
ACTB-205ENST00000432588 APOMO95445 188 aa10.05□□□□□ -0.8
ACTB-205ENST00000432588 TMEM241Q24JQ0 296 aa10.05□□□□□ -0.8
ACTB-205ENST00000432588 FAM74A3Q4VXF1 159 aa10.05□□□□□ -0.8
ACTB-205ENST00000432588 RNASE13Q5GAN3 156 aaKnown RBP10.04□□□□□ -0.8
ACTB-205ENST00000432588 C2orf48Q96LS8 159 aa10.04□□□□□ -0.8
ACTB-205ENST00000432588 TIMM21Q9BVV7 248 aa10.04□□□□□ -0.8
ACTB-205ENST00000432588 TCAPO15273 167 aa10.03□□□□□ -0.8
ACTB-205ENST00000432588 SRSF9Q13242 221 aaKnown RBP eCLIP10.03□□□□□ -0.8
ACTB-205ENST00000432588 MRPL51Q4U2R6 128 aaKnown RBP10.03□□□□□ -0.8
ACTB-205ENST00000432588 FAM104BQ5XKR9 115 aa10.03□□□□□ -0.8
ACTB-205ENST00000432588 Q6ZUT4 128 aa10.03□□□□□ -0.8
ACTB-205ENST00000432588 C20orf78Q9BR46 151 aa10.03□□□□□ -0.8
ACTB-205ENST00000432588 A0A1B0GW15 77 aa10.02□□□□□ -0.81
ACTB-205ENST00000432588 LINC00862A6NCI5 91 aa10.02□□□□□ -0.81
ACTB-205ENST00000432588 KRTAP10-8P60410 259 aa10.02□□□□□ -0.81
ACTB-205ENST00000432588 ADIRFQ15847 76 aa10.02□□□□□ -0.81
ACTB-205ENST00000432588 C5orf38Q86SI9 138 aa10.02□□□□□ -0.81
ACTB-205ENST00000432588 CKS2P33552 79 aa10.01□□□□□ -0.81
ACTB-205ENST00000432588 RPL23P62829 140 aaKnown RBP10.01□□□□□ -0.81
ACTB-205ENST00000432588 RPL18AQ02543 176 aaKnown RBP10.01□□□□□ -0.81
ACTB-205ENST00000432588 SPAG11BQ08648 103 aa10.01□□□□□ -0.81
ACTB-205ENST00000432588 LRP2P98164 4655 aa10.01□□□□□ -0.81
ACTB-205ENST00000432588 TRBV24-1A0A075B6N3 115 aa10□□□□□ -0.81
ACTB-205ENST00000432588 A0A1W2PNN7 141 aa10□□□□□ -0.81
ACTB-205ENST00000432588 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10□□□□□ -0.81
ACTB-205ENST00000432588 RPL32P62910 135 aaKnown RBP10□□□□□ -0.81
ACTB-205ENST00000432588 C9orf116Q5BN46 136 aaPredicted RBP10□□□□□ -0.81
ACTB-205ENST00000432588 OR10D4PQ8NGN7 298 aa10□□□□□ -0.81
ACTB-205ENST00000432588 NAT8Q9UHE5 227 aa10□□□□□ -0.81
ACTB-205ENST00000432588 SMIM27A0A1W2PRY6 76 aa9.99□□□□□ -0.81
ACTB-205ENST00000432588 MT-ND6P03923 174 aa9.99□□□□□ -0.81
ACTB-205ENST00000432588 RNF151Q2KHN1 245 aa9.99□□□□□ -0.81
ACTB-205ENST00000432588 TNFRSF6BO95407 300 aa9.98□□□□□ -0.81
ACTB-205ENST00000432588 S100A8P05109 93 aa9.98□□□□□ -0.81
ACTB-205ENST00000432588 ODF1Q14990 250 aa9.98□□□□□ -0.81
ACTB-205ENST00000432588 SPANXA1Q9NS26 97 aa9.98□□□□□ -0.81
ACTB-205ENST00000432588 F8W036 122 aa9.97□□□□□ -0.81
ACTB-205ENST00000432588 F8WDY8 70 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms