RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 TMEM191AQ9H0A3 160 aa9.71□□□□□ -0.86
SEC13-210ENST00000428626 ST20Q9HBF5 79 aa9.71□□□□□ -0.86
SEC13-210ENST00000428626 LRP2P98164 4655 aa9.7□□□□□ -0.86
SEC13-210ENST00000428626 hCG_2014768A0A024R1R8 64 aa9.7□□□□□ -0.86
SEC13-210ENST00000428626 A0A1B0GUT8 65 aa9.7□□□□□ -0.86
SEC13-210ENST00000428626 SMKR1H3BMG3 65 aa9.7□□□□□ -0.86
SEC13-210ENST00000428626 PRR3P79522 188 aaKnown RBP9.7□□□□□ -0.86
SEC13-210ENST00000428626 AKAP14Q86UN6 197 aa9.7□□□□□ -0.86
SEC13-210ENST00000428626 AMN1Q8IY45 258 aa9.7□□□□□ -0.86
SEC13-210ENST00000428626 SMIM7Q9BQ49 75 aa9.7□□□□□ -0.86
SEC13-210ENST00000428626 CDC42SE2Q9NRR3 84 aa9.7□□□□□ -0.86
SEC13-210ENST00000428626 TRBV27A0A0K0K1C4 114 aa9.69□□□□□ -0.86
SEC13-210ENST00000428626 MRPL52Q86TS9 123 aaKnown RBP9.69□□□□□ -0.86
SEC13-210ENST00000428626 C7orf33Q8WU49 177 aa9.69□□□□□ -0.86
SEC13-210ENST00000428626 MRAP2Q96G30 205 aa9.69□□□□□ -0.86
SEC13-210ENST00000428626 BTF3L4Q96K17 158 aa9.69□□□□□ -0.86
SEC13-210ENST00000428626 IGHV1-58A0A0C4DH39 117 aa9.68□□□□□ -0.86
SEC13-210ENST00000428626 SRP19P09132 144 aaKnown RBP9.68□□□□□ -0.86
SEC13-210ENST00000428626 TMEM101Q96IK0 257 aa9.68□□□□□ -0.86
SEC13-210ENST00000428626 OSTCQ9NRP0 149 aa9.68□□□□□ -0.86
SEC13-210ENST00000428626 V9GYV3 84 aa9.68□□□□□ -0.86
SEC13-210ENST00000428626 CD164L2Q6UWJ8 174 aa9.67□□□□□ -0.86
SEC13-210ENST00000428626 ZNF664Q8N3J9 261 aa9.67□□□□□ -0.86
SEC13-210ENST00000428626 NRACQ8N912 160 aa9.67□□□□□ -0.86
SEC13-210ENST00000428626 FAM210AQ96ND0 272 aa9.67□□□□□ -0.86
SEC13-210ENST00000428626 EIF5A2Q9GZV4 153 aaKnown RBP9.67□□□□□ -0.86
SEC13-210ENST00000428626 C7orf77A4D0Y5 90 aa9.66□□□□□ -0.86
SEC13-210ENST00000428626 ZNF727A8MUV8 499 aa9.66□□□□□ -0.86
SEC13-210ENST00000428626 NUP35Q8NFH5 326 aa9.66□□□□□ -0.86
SEC13-210ENST00000428626 BORCS7Q96B45 105 aa9.66□□□□□ -0.86
SEC13-210ENST00000428626 CARD19Q96LW7 228 aa9.66□□□□□ -0.86
SEC13-210ENST00000428626 SS18Q15532 418 aa9.65□□□□□ -0.86
SEC13-210ENST00000428626 RNASE13Q5GAN3 156 aaKnown RBP9.65□□□□□ -0.86
SEC13-210ENST00000428626 LINC01600Q96MT4 127 aa9.65□□□□□ -0.86
SEC13-210ENST00000428626 SYCNQ0VAF6 134 aa9.64□□□□□ -0.87
SEC13-210ENST00000428626 UBE2D4Q9Y2X8 147 aa9.64□□□□□ -0.87
SEC13-210ENST00000428626 C9JQL5 133 aa9.63□□□□□ -0.87
SEC13-210ENST00000428626 ISOC2Q96AB3 205 aa9.63□□□□□ -0.87
SEC13-210ENST00000428626 IGLV4-69A0A075B6H9 119 aa9.62□□□□□ -0.87
SEC13-210ENST00000428626 VCYO14598 125 aa9.62□□□□□ -0.87
SEC13-210ENST00000428626 CAMPP49913 170 aa9.62□□□□□ -0.87
SEC13-210ENST00000428626 SUMO2P61956 95 aaKnown RBP9.62□□□□□ -0.87
SEC13-210ENST00000428626 RPL23P62829 140 aaKnown RBP9.62□□□□□ -0.87
SEC13-210ENST00000428626 SRSF9Q13242 221 aaKnown RBP eCLIP9.62□□□□□ -0.87
SEC13-210ENST00000428626 MRPL51Q4U2R6 128 aaKnown RBP9.62□□□□□ -0.87
SEC13-210ENST00000428626 FAM104AQ969W3 186 aa9.62□□□□□ -0.87
SEC13-210ENST00000428626 ZNF561-AS1K7EIQ3 104 aa9.61□□□□□ -0.87
SEC13-210ENST00000428626 PTTG1IPP53801 180 aa9.61□□□□□ -0.87
SEC13-210ENST00000428626 RIGQ13278 110 aa9.61□□□□□ -0.87
SEC13-210ENST00000428626 Q6ZUT4 128 aa9.61□□□□□ -0.87
SEC13-210ENST00000428626 LINC00474Q9P2X8 69 aa9.61□□□□□ -0.87
SEC13-210ENST00000428626 CSDC2Q9Y534 153 aaKnown RBP9.61□□□□□ -0.87
SEC13-210ENST00000428626 A0A1W2PNN7 141 aa9.6□□□□□ -0.87
SEC13-210ENST00000428626 FCER1GP30273 86 aa9.6□□□□□ -0.87
SEC13-210ENST00000428626 KRTAP10-8P60410 259 aa9.6□□□□□ -0.87
SEC13-210ENST00000428626 FAM104BQ5XKR9 115 aa9.6□□□□□ -0.87
SEC13-210ENST00000428626 TRAV13-1A0A0B4J241 112 aa9.59□□□□□ -0.87
SEC13-210ENST00000428626 A0A0J9YXV3 536 aa9.59□□□□□ -0.87
SEC13-210ENST00000428626 C1orf196B1AJZ1 125 aa9.59□□□□□ -0.87
SEC13-210ENST00000428626 COX7A2LO14548 114 aa9.59□□□□□ -0.87
SEC13-210ENST00000428626 SRSF3P84103 164 aaKnown RBP9.59□□□□□ -0.87
SEC13-210ENST00000428626 GAGE2BQ13066 116 aa9.59□□□□□ -0.87
SEC13-210ENST00000428626 TMEM241Q24JQ0 296 aa9.59□□□□□ -0.87
SEC13-210ENST00000428626 C5orf38Q86SI9 138 aa9.59□□□□□ -0.87
SEC13-210ENST00000428626 NAT8BQ9UHF3 227 aa9.59□□□□□ -0.87
SEC13-210ENST00000428626 SMIM27A0A1W2PRY6 76 aa9.58□□□□□ -0.88
SEC13-210ENST00000428626 SPINK6Q6UWN8 80 aa9.58□□□□□ -0.88
SEC13-210ENST00000428626 RNF213Q63HN8 5207 aa9.57□□□□□ -0.88
SEC13-210ENST00000428626 LOC107984640A0A0U1RRK4 108 aa9.57□□□□□ -0.88
SEC13-210ENST00000428626 A0A1B0GVG6 124 aa9.57□□□□□ -0.88
SEC13-210ENST00000428626 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.57□□□□□ -0.88
SEC13-210ENST00000428626 MALP21145 153 aa9.57□□□□□ -0.88
SEC13-210ENST00000428626 RPL39P62891 51 aaKnown RBP9.57□□□□□ -0.88
SEC13-210ENST00000428626 ADIRFQ15847 76 aa9.57□□□□□ -0.88
SEC13-210ENST00000428626 FAM74A3Q4VXF1 159 aa9.57□□□□□ -0.88
SEC13-210ENST00000428626 Q6ZRP5 223 aa9.57□□□□□ -0.88
SEC13-210ENST00000428626 KIR2DL4Q99706 377 aa9.57□□□□□ -0.88
SEC13-210ENST00000428626 TRBV24-1A0A075B6N3 115 aa9.56□□□□□ -0.88
SEC13-210ENST00000428626 PPP1R17O96001 155 aa9.56□□□□□ -0.88
SEC13-210ENST00000428626 CAMK2N2Q96S95 79 aa9.56□□□□□ -0.88
SEC13-210ENST00000428626 OPRPNQ99935 248 aaPredicted RBP9.56□□□□□ -0.88
SEC13-210ENST00000428626 TIMM21Q9BVV7 248 aa9.56□□□□□ -0.88
SEC13-210ENST00000428626 PKIGQ9Y2B9 76 aa9.56□□□□□ -0.88
SEC13-210ENST00000428626 PPP1R2P9O14990 202 aa9.55□□□□□ -0.88
SEC13-210ENST00000428626 APOMO95445 188 aa9.55□□□□□ -0.88
SEC13-210ENST00000428626 C2orf48Q96LS8 159 aa9.55□□□□□ -0.88
SEC13-210ENST00000428626 TNFRSF6BO95407 300 aa9.54□□□□□ -0.88
SEC13-210ENST00000428626 RPL32P62910 135 aaKnown RBP9.54□□□□□ -0.88
SEC13-210ENST00000428626 C9orf116Q5BN46 136 aaPredicted RBP9.54□□□□□ -0.88
SEC13-210ENST00000428626 C20orf78Q9BR46 151 aa9.54□□□□□ -0.88
SEC13-210ENST00000428626 NAT8Q9UHE5 227 aa9.54□□□□□ -0.88
SEC13-210ENST00000428626 LINC00862A6NCI5 91 aa9.53□□□□□ -0.88
SEC13-210ENST00000428626 SPAG11BQ08648 103 aa9.53□□□□□ -0.88
SEC13-210ENST00000428626 SMIM2Q9BVW6 85 aa9.53□□□□□ -0.88
SEC13-210ENST00000428626 PSORS1C2Q9UIG4 136 aa9.53□□□□□ -0.88
SEC13-210ENST00000428626 IGHV3OR16-9A0A0B4J2B5 98 aa9.52□□□□□ -0.89
SEC13-210ENST00000428626 A0A1B0GXF2 115 aa9.52□□□□□ -0.89
SEC13-210ENST00000428626 D6R8Y8 96 aa9.52□□□□□ -0.89
SEC13-210ENST00000428626 NPYP01303 97 aa9.52□□□□□ -0.89
SEC13-210ENST00000428626 CKS2P33552 79 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms