RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 A0A087WYN8 130 aa12.13□□□□□ -0.47
AL954642.1-201ENST00000428088 TRBV27A0A0K0K1C4 114 aa12.13□□□□□ -0.47
AL954642.1-201ENST00000428088 LINC00959A0A1B0GUT2 108 aa12.13□□□□□ -0.47
AL954642.1-201ENST00000428088 OXTP01178 125 aa12.13□□□□□ -0.47
AL954642.1-201ENST00000428088 XCL1P47992 114 aa12.13□□□□□ -0.47
AL954642.1-201ENST00000428088 COX6A2Q02221 97 aa12.13□□□□□ -0.47
AL954642.1-201ENST00000428088 ADIRFQ15847 76 aa12.13□□□□□ -0.47
AL954642.1-201ENST00000428088 FAM74A3Q4VXF1 159 aa12.13□□□□□ -0.47
AL954642.1-201ENST00000428088 SPACA4Q8TDM5 124 aa12.13□□□□□ -0.47
AL954642.1-201ENST00000428088 CCL25O15444 150 aa12.12□□□□□ -0.47
AL954642.1-201ENST00000428088 SRSF3P84103 164 aaKnown RBP12.12□□□□□ -0.47
AL954642.1-201ENST00000428088 NAT8BQ9UHF3 227 aa12.12□□□□□ -0.47
AL954642.1-201ENST00000428088 GVQW2A0A096LPI5 108 aaPredicted RBP12.11□□□□□ -0.47
AL954642.1-201ENST00000428088 CDC42SE2Q9NRR3 84 aa12.11□□□□□ -0.47
AL954642.1-201ENST00000428088 NAT8Q9UHE5 227 aa12.11□□□□□ -0.47
AL954642.1-201ENST00000428088 C7orf77A4D0Y5 90 aa12.1□□□□□ -0.47
AL954642.1-201ENST00000428088 VCYO14598 125 aa12.1□□□□□ -0.47
AL954642.1-201ENST00000428088 MRPL52Q86TS9 123 aaKnown RBP12.1□□□□□ -0.47
AL954642.1-201ENST00000428088 NRACQ8N912 160 aa12.1□□□□□ -0.47
AL954642.1-201ENST00000428088 PRSS3P2Q8NHM4 247 aa12.1□□□□□ -0.47
AL954642.1-201ENST00000428088 FCER1GP30273 86 aa12.09□□□□□ -0.47
AL954642.1-201ENST00000428088 SUMO2P61956 95 aaKnown RBP12.09□□□□□ -0.47
AL954642.1-201ENST00000428088 PEA15Q15121 130 aa12.09□□□□□ -0.47
AL954642.1-201ENST00000428088 SS18Q15532 418 aa12.09□□□□□ -0.47
AL954642.1-201ENST00000428088 ZNF664Q8N3J9 261 aa12.09□□□□□ -0.47
AL954642.1-201ENST00000428088 IGKV2-24A0A0C4DH68 120 aa12.08□□□□□ -0.48
AL954642.1-201ENST00000428088 SMIM27A0A1W2PRY6 76 aa12.08□□□□□ -0.48
AL954642.1-201ENST00000428088 CAMPP49913 170 aa12.08□□□□□ -0.48
AL954642.1-201ENST00000428088 MRPL51Q4U2R6 128 aaKnown RBP12.08□□□□□ -0.48
AL954642.1-201ENST00000428088 FAM104BQ5XKR9 115 aa12.08□□□□□ -0.48
AL954642.1-201ENST00000428088 LINC00526Q96FQ7 95 aa12.08□□□□□ -0.48
AL954642.1-201ENST00000428088 PPP1R17O96001 155 aa12.07□□□□□ -0.48
AL954642.1-201ENST00000428088 MAJINQ3KP22 176 aa12.07□□□□□ -0.48
AL954642.1-201ENST00000428088 PLAC8Q9NZF1 115 aa12.07□□□□□ -0.48
AL954642.1-201ENST00000428088 IGHV1-58A0A0C4DH39 117 aa12.06□□□□□ -0.48
AL954642.1-201ENST00000428088 CD164L2Q6UWJ8 174 aa12.06□□□□□ -0.48
AL954642.1-201ENST00000428088 RNASE13Q5GAN3 156 aaKnown RBP12.05□□□□□ -0.48
AL954642.1-201ENST00000428088 KIR2DL4Q99706 377 aa12.05□□□□□ -0.48
AL954642.1-201ENST00000428088 PPP1R2P9O14990 202 aa12.04□□□□□ -0.48
AL954642.1-201ENST00000428088 SMDT1Q9H4I9 107 aa12.04□□□□□ -0.48
AL954642.1-201ENST00000428088 UBE2D4Q9Y2X8 147 aa12.04□□□□□ -0.48
AL954642.1-201ENST00000428088 A0A096LNI7 61 aa12.03□□□□□ -0.48
AL954642.1-201ENST00000428088 PHOX2AO14813 284 aa12.03□□□□□ -0.48
AL954642.1-201ENST00000428088 CKS2P33552 79 aa12.03□□□□□ -0.48
AL954642.1-201ENST00000428088 STPG4Q8N801 248 aa12.03□□□□□ -0.48
AL954642.1-201ENST00000428088 CSDC2Q9Y534 153 aaKnown RBP12.03□□□□□ -0.48
AL954642.1-201ENST00000428088 A0A1B0GW15 77 aa12.02□□□□□ -0.49
AL954642.1-201ENST00000428088 LINC00862A6NCI5 91 aa12.02□□□□□ -0.49
AL954642.1-201ENST00000428088 ZNF561-AS1K7EIQ3 104 aa12.02□□□□□ -0.49
AL954642.1-201ENST00000428088 SERTAD4-AS1Q5TG53 156 aa12.02□□□□□ -0.49
AL954642.1-201ENST00000428088 MRPL54Q6P161 138 aaKnown RBP12.02□□□□□ -0.49
AL954642.1-201ENST00000428088 CARD19Q96LW7 228 aa12.02□□□□□ -0.49
AL954642.1-201ENST00000428088 TRBV24-1A0A075B6N3 115 aa12.01□□□□□ -0.49
AL954642.1-201ENST00000428088 C1orf196B1AJZ1 125 aa12.01□□□□□ -0.49
AL954642.1-201ENST00000428088 SMAGPQ0VAQ4 97 aa12.01□□□□□ -0.49
AL954642.1-201ENST00000428088 C7orf33Q8WU49 177 aa12.01□□□□□ -0.49
AL954642.1-201ENST00000428088 C20orf78Q9BR46 151 aa12.01□□□□□ -0.49
AL954642.1-201ENST00000428088 HMCN2Q8NDA2 5059 aa12.01□□□□□ -0.49
AL954642.1-201ENST00000428088 TRAV13-1A0A0B4J241 112 aa12□□□□□ -0.49
AL954642.1-201ENST00000428088 TNFRSF6BO95407 300 aa12□□□□□ -0.49
AL954642.1-201ENST00000428088 Q6ZRU5 148 aa12□□□□□ -0.49
AL954642.1-201ENST00000428088 D6R8Y8 96 aa11.99□□□□□ -0.49
AL954642.1-201ENST00000428088 MALP21145 153 aa11.99□□□□□ -0.49
AL954642.1-201ENST00000428088 HBBP68871 147 aa11.99□□□□□ -0.49
AL954642.1-201ENST00000428088 SYCNQ0VAF6 134 aa11.99□□□□□ -0.49
AL954642.1-201ENST00000428088 Q6ZUT4 128 aa11.99□□□□□ -0.49
AL954642.1-201ENST00000428088 TMEM18Q96B42 140 aa11.99□□□□□ -0.49
AL954642.1-201ENST00000428088 A0A1B0GXF2 115 aa11.98□□□□□ -0.49
AL954642.1-201ENST00000428088 COX7A2LO14548 114 aa11.98□□□□□ -0.49
AL954642.1-201ENST00000428088 RPL39P62891 51 aaKnown RBP11.98□□□□□ -0.49
AL954642.1-201ENST00000428088 RPL32P62910 135 aaKnown RBP11.98□□□□□ -0.49
AL954642.1-201ENST00000428088 IGLV4-69A0A075B6H9 119 aa11.97□□□□□ -0.49
AL954642.1-201ENST00000428088 F8W036 122 aa11.97□□□□□ -0.49
AL954642.1-201ENST00000428088 S100A8P05109 93 aa11.97□□□□□ -0.49
AL954642.1-201ENST00000428088 C5orf38Q86SI9 138 aa11.97□□□□□ -0.49
AL954642.1-201ENST00000428088 TIMM21Q9BVV7 248 aa11.97□□□□□ -0.49
AL954642.1-201ENST00000428088 SMIM2Q9BVW6 85 aa11.97□□□□□ -0.49
AL954642.1-201ENST00000428088 NPYP01303 97 aa11.96□□□□□ -0.49
AL954642.1-201ENST00000428088 LINC00474Q9P2X8 69 aa11.96□□□□□ -0.49
AL954642.1-201ENST00000428088 PKIGQ9Y2B9 76 aa11.96□□□□□ -0.49
AL954642.1-201ENST00000428088 TCAPO15273 167 aa11.95□□□□□ -0.5
AL954642.1-201ENST00000428088 MT1HL1P0DM35 61 aa11.95□□□□□ -0.5
AL954642.1-201ENST00000428088 FAM104AQ969W3 186 aa11.94□□□□□ -0.5
AL954642.1-201ENST00000428088 PRR3P79522 188 aaKnown RBP11.93□□□□□ -0.5
AL954642.1-201ENST00000428088 CAMK2N2Q96S95 79 aa11.93□□□□□ -0.5
AL954642.1-201ENST00000428088 OPRPNQ99935 248 aaPredicted RBP11.93□□□□□ -0.5
AL954642.1-201ENST00000428088 PPBPP02775 128 aa11.92□□□□□ -0.5
AL954642.1-201ENST00000428088 GAGE2BQ13066 116 aa11.92□□□□□ -0.5
AL954642.1-201ENST00000428088 TNXBP22105 4242 aa11.91□□□□□ -0.5
AL954642.1-201ENST00000428088 LOC107984640A0A0U1RRK4 108 aa11.91□□□□□ -0.5
AL954642.1-201ENST00000428088 APOMO95445 188 aa11.91□□□□□ -0.5
AL954642.1-201ENST00000428088 PTTG1IPP53801 180 aa11.91□□□□□ -0.5
AL954642.1-201ENST00000428088 TMEM136Q6ZRR5 245 aa11.91□□□□□ -0.5
AL954642.1-201ENST00000428088 PLA2G2DQ9UNK4 145 aa11.91□□□□□ -0.5
AL954642.1-201ENST00000428088 ATP5L2Q7Z4Y8 100 aa11.9□□□□□ -0.5
AL954642.1-201ENST00000428088 ORMDL3Q8N138 153 aa11.9□□□□□ -0.5
AL954642.1-201ENST00000428088 C2orf48Q96LS8 159 aa11.9□□□□□ -0.5
AL954642.1-201ENST00000428088 SPANXA1Q9NS26 97 aa11.9□□□□□ -0.5
AL954642.1-201ENST00000428088 SPAG11BQ08648 103 aa11.89□□□□□ -0.51
AL954642.1-201ENST00000428088 PRELID3AQ96N28 172 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms