RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 MT1MQ8N339 61 aa-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 SNRNP25Q9BV90 132 aaKnown RBP-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 SCN3BQ9NY72 215 aa-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 LAMA2P24043 3122 aaKnown RBP-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 BIRC6Q9NR09 4857 aa-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 DNHD1Q96M86 4753 aa-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 USP9YO00507 2555 aaPredicted RBP-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 RIF1Q5UIP0 2472 aaKnown RBP-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 TGP01266 2768 aa-0.16□□□□□ -2.43
GCFC2-203ENST00000427862 SETXQ7Z333 2677 aaKnown RBP-0.16□□□□□ -2.43
GCFC2-203ENST00000427862 NIPBLQ6KC79 2804 aaeCLIP-0.16□□□□□ -2.43
GCFC2-203ENST00000427862 EPG5Q9HCE0 2579 aa-0.16□□□□□ -2.43
GCFC2-203ENST00000427862 TNRC18O15417 2968 aaPredicted RBP-0.16□□□□□ -2.43
GCFC2-203ENST00000427862 PCNX1Q96RV3 2341 aa-0.16□□□□□ -2.43
GCFC2-203ENST00000427862 ACACBO00763 2458 aa-0.16□□□□□ -2.43
GCFC2-203ENST00000427862 K7EP34 96 aa-0.16□□□□□ -2.44
GCFC2-203ENST00000427862 MT1FP04733 61 aa-0.16□□□□□ -2.44
GCFC2-203ENST00000427862 MT1HP80294 61 aa-0.16□□□□□ -2.44
GCFC2-203ENST00000427862 MT1XP80297 61 aa-0.16□□□□□ -2.44
GCFC2-203ENST00000427862 SPAG11BQ08648 103 aa-0.16□□□□□ -2.44
GCFC2-203ENST00000427862 DEFB112Q30KQ8 113 aa-0.16□□□□□ -2.44
GCFC2-203ENST00000427862 C10orf128Q5T292 105 aa-0.16□□□□□ -2.44
GCFC2-203ENST00000427862 WFDC9Q8NEX5 89 aa-0.16□□□□□ -2.44
GCFC2-203ENST00000427862 ARL11Q969Q4 196 aa-0.16□□□□□ -2.44
GCFC2-203ENST00000427862 RERGLQ9H628 205 aa-0.16□□□□□ -2.44
GCFC2-203ENST00000427862 MGAM2Q2M2H8 2515 aa-0.16□□□□□ -2.44
GCFC2-203ENST00000427862 HSPG2P98160 4391 aa-0.16□□□□□ -2.44
GCFC2-203ENST00000427862 CHD6Q8TD26 2715 aa-0.16□□□□□ -2.44
GCFC2-203ENST00000427862 FLNBO75369 2602 aaKnown RBP-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 LAMA1P25391 3075 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 LPAP08519 4548 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 MYO15AQ9UKN7 3530 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 ASXL1Q8IXJ9 1541 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 PARP14Q460N5 1801 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 CFAP46Q8IYW2 2715 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 PRRC2CQ9Y520 2896 aaKnown RBP-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 LYNX1G3V0Z9 82 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 H3BNG1 76 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 M0R135 149 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 DEFB4AO15263 64 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 MT1EP04732 61 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 MAP1BP46821 2468 aaKnown RBP-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 RPS29P62273 56 aaKnown RBP-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 ATRQ13535 2644 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 DEFB109BQ30KR1 87 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 CDC42BPGQ6DT37 1551 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 SPAG11AQ6PDA7 123 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 COX6B2Q6YFQ2 88 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 SMIM4Q8WVI0 70 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 MT1LQ93083 61 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 COL12A1Q99715 3063 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 LINC00470Q9BZP3 86 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 SERP1Q9Y6X1 66 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 ITPR3Q14573 2671 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 BSNQ9UPA5 3926 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 SIPA1L3O60292 1781 aaPredicted RBP-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 LAMA3Q16787 3333 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 FAT3Q8TDW7 4589 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 IQSEC2Q5JU85 1478 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 ZNF292O60281 2723 aa-0.17□□□□□ -2.44
GCFC2-203ENST00000427862 CCDC168Q8NDH2 2452 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 APC2O95996 2303 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 TLN2Q9Y4G6 2542 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 CEP295Q9C0D2 2601 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 LCE6AA0A183 80 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 M0R3E3 92 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 SSSCA1O60232 199 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 S100A12P80511 92 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 DEFB110Q30KQ9 67 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 KRTAP19-5Q3LI72 72 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 Q6AWC8 147 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 Q8N8P6 123 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 LSM10Q969L4 123 aaKnown RBP-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 LINC01600Q96MT4 127 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 TTTY10Q9BZA0 68 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 FXYD6Q9H0Q3 95 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 LENEPQ9Y5L5 61 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 S4R3F8 94 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 GCN1Q92616 2671 aaKnown RBP-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 MTORP42345 2549 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 PPRC1Q5VV67 1664 aaKnown RBP-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 KMT2AQ03164 3969 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 LRP1BQ9NZR2 4599 aa-0.18□□□□□ -2.44
GCFC2-203ENST00000427862 NF1P21359 2839 aa-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 MAP1AP78559 2803 aaPredicted RBP-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 PKD1L2Q7Z442 2459 aa-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 WDR87Q6ZQQ6 2873 aa-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 MYO9AB2RTY4 2548 aa-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 FAM186AA6NE01 2351 aa-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 PPIP5K1Q6PFW1 1433 aa-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 ANKRD50Q9ULJ7 1429 aa-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 ITPR1Q14643 2758 aa-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 PIEZO2Q9H5I5 2752 aa-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 ARFGEF1Q9Y6D6 1849 aa-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 GVINP1Q7Z2Y8 2422 aa-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 MXRA5Q9NR99 2828 aa-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 LINC00959A0A1B0GUT2 108 aa-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 FAM25AB3EWG3 89 aa-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 FAM25CB3EWG5 89 aa-0.19□□□□□ -2.44
GCFC2-203ENST00000427862 FAM25GB3EWG6 89 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms