RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 COX19Q49B96 90 aa12.41□□□□□ -0.42
COL9A2-204ENST00000427563 C14orf177Q52M58 125 aa12.41□□□□□ -0.42
COL9A2-204ENST00000427563 SCXQ7RTU7 201 aa12.41□□□□□ -0.42
COL9A2-204ENST00000427563 D6R8Y8 96 aa12.4□□□□□ -0.42
COL9A2-204ENST00000427563 TSHBP01222 138 aa12.4□□□□□ -0.42
COL9A2-204ENST00000427563 CKS2P33552 79 aa12.4□□□□□ -0.42
COL9A2-204ENST00000427563 NRACQ8N912 160 aa12.4□□□□□ -0.42
COL9A2-204ENST00000427563 GNB1LQ9BYB4 327 aa12.4□□□□□ -0.42
COL9A2-204ENST00000427563 TRAV8-4A0A0B4J246 113 aa12.39□□□□□ -0.43
COL9A2-204ENST00000427563 S100A1P23297 94 aa12.39□□□□□ -0.43
COL9A2-204ENST00000427563 POLR2KP53803 58 aaKnown RBP12.39□□□□□ -0.43
COL9A2-204ENST00000427563 I3L3M4 83 aa12.38□□□□□ -0.43
COL9A2-204ENST00000427563 PPP1R17O96001 155 aa12.38□□□□□ -0.43
COL9A2-204ENST00000427563 APCSP02743 223 aa12.38□□□□□ -0.43
COL9A2-204ENST00000427563 PPBPP02775 128 aa12.38□□□□□ -0.43
COL9A2-204ENST00000427563 ESDP10768 282 aa12.38□□□□□ -0.43
COL9A2-204ENST00000427563 FLG2Q5D862 2391 aaPredicted RBP12.38□□□□□ -0.43
COL9A2-204ENST00000427563 FAM229AH3BQW9 127 aa12.37□□□□□ -0.43
COL9A2-204ENST00000427563 SCO1O75880 301 aa12.37□□□□□ -0.43
COL9A2-204ENST00000427563 MT-ND6P03923 174 aa12.37□□□□□ -0.43
COL9A2-204ENST00000427563 FGF6P10767 208 aa12.37□□□□□ -0.43
COL9A2-204ENST00000427563 ORMDL3Q8N138 153 aa12.37□□□□□ -0.43
COL9A2-204ENST00000427563 CHAC1Q9BUX1 264 aa12.37□□□□□ -0.43
COL9A2-204ENST00000427563 ST20Q9HBF5 79 aa12.37□□□□□ -0.43
COL9A2-204ENST00000427563 SLPIP03973 132 aa12.36□□□□□ -0.43
COL9A2-204ENST00000427563 PMCHP20382 165 aa12.36□□□□□ -0.43
COL9A2-204ENST00000427563 LINC00528Q8N1L1 170 aa12.36□□□□□ -0.43
COL9A2-204ENST00000427563 CIRBP-AS1Q8TBR5 109 aa12.36□□□□□ -0.43
COL9A2-204ENST00000427563 TRBV27A0A0K0K1C4 114 aa12.35□□□□□ -0.43
COL9A2-204ENST00000427563 H7C423 109 aa12.35□□□□□ -0.43
COL9A2-204ENST00000427563 PHOX2AO14813 284 aa12.35□□□□□ -0.43
COL9A2-204ENST00000427563 TNFRSF6BO95407 300 aa12.35□□□□□ -0.43
COL9A2-204ENST00000427563 NPYP01303 97 aa12.35□□□□□ -0.43
COL9A2-204ENST00000427563 DGAT2L7PQ6IED9 249 aa12.35□□□□□ -0.43
COL9A2-204ENST00000427563 C9orf163Q8N9P6 203 aa12.35□□□□□ -0.43
COL9A2-204ENST00000427563 PRELID3AQ96N28 172 aa12.35□□□□□ -0.43
COL9A2-204ENST00000427563 MRPL18Q9H0U6 180 aaKnown RBP12.35□□□□□ -0.43
COL9A2-204ENST00000427563 IGKV3OR2-268A0A0C4DH90 116 aa12.34□□□□□ -0.43
COL9A2-204ENST00000427563 SUMO2P61956 95 aaKnown RBP12.34□□□□□ -0.43
COL9A2-204ENST00000427563 KIAA1644Q3SXP7 199 aa12.34□□□□□ -0.43
COL9A2-204ENST00000427563 RNASEKQ6P5S7 137 aaKnown RBP12.34□□□□□ -0.43
COL9A2-204ENST00000427563 C15orf56Q8N910 161 aa12.34□□□□□ -0.43
COL9A2-204ENST00000427563 C20orf78Q9BR46 151 aa12.34□□□□□ -0.43
COL9A2-204ENST00000427563 GAGE12HA6NDE8 117 aa12.33□□□□□ -0.44
COL9A2-204ENST00000427563 PANO1I0J062 215 aa12.33□□□□□ -0.44
COL9A2-204ENST00000427563 KRTAP10-4P60372 401 aaPredicted RBP12.33□□□□□ -0.44
COL9A2-204ENST00000427563 AMMECR1LQ6DCA0 310 aa12.33□□□□□ -0.44
COL9A2-204ENST00000427563 LAMTOR2Q9Y2Q5 125 aa12.33□□□□□ -0.44
COL9A2-204ENST00000427563 TRAPPC1Q9Y5R8 145 aa12.33□□□□□ -0.44
COL9A2-204ENST00000427563 FABP9Q0Z7S8 132 aa12.32□□□□□ -0.44
COL9A2-204ENST00000427563 PKHD1L1Q86WI1 4243 aa12.31□□□□□ -0.44
COL9A2-204ENST00000427563 COLCA2A8K830 154 aa12.31□□□□□ -0.44
COL9A2-204ENST00000427563 CNBPP62633 177 aaKnown RBP12.31□□□□□ -0.44
COL9A2-204ENST00000427563 RPL32P62910 135 aaKnown RBP12.31□□□□□ -0.44
COL9A2-204ENST00000427563 SDIM1Q6ZPB5 146 aa12.31□□□□□ -0.44
COL9A2-204ENST00000427563 CHCHD10Q8WYQ3 142 aaPredicted RBP12.31□□□□□ -0.44
COL9A2-204ENST00000427563 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.31□□□□□ -0.44
COL9A2-204ENST00000427563 hDV102S1A0JD36 115 aa12.3□□□□□ -0.44
COL9A2-204ENST00000427563 VCYO14598 125 aa12.3□□□□□ -0.44
COL9A2-204ENST00000427563 ZNF25P17030 456 aaPredicted RBP12.3□□□□□ -0.44
COL9A2-204ENST00000427563 SMIM2Q9BVW6 85 aa12.3□□□□□ -0.44
COL9A2-204ENST00000427563 FOXI1Q12951 378 aa12.29□□□□□ -0.44
COL9A2-204ENST00000427563 MRPL52Q86TS9 123 aaKnown RBP12.29□□□□□ -0.44
COL9A2-204ENST00000427563 OR5A1Q8NGJ0 315 aa12.29□□□□□ -0.44
COL9A2-204ENST00000427563 ALKBH7Q9BT30 221 aaPredicted RBP12.29□□□□□ -0.44
COL9A2-204ENST00000427563 PRSS47A8MTI9 375 aa12.28□□□□□ -0.44
COL9A2-204ENST00000427563 MAP1LC3AQ9H492 121 aa12.28□□□□□ -0.44
COL9A2-204ENST00000427563 LINC00959A0A1B0GUT2 108 aa12.27□□□□□ -0.45
COL9A2-204ENST00000427563 CDC42SE2Q9NRR3 84 aa12.27□□□□□ -0.45
COL9A2-204ENST00000427563 RAB5AP20339 215 aa12.26□□□□□ -0.45
COL9A2-204ENST00000427563 KIR2DL4Q99706 377 aa12.26□□□□□ -0.45
COL9A2-204ENST00000427563 LOC389332A0A1B0GUA5 103 aa12.25□□□□□ -0.45
COL9A2-204ENST00000427563 PLA2G1BP04054 148 aaKnown RBP12.25□□□□□ -0.45
COL9A2-204ENST00000427563 HIGD2BQ4VC39 106 aa12.25□□□□□ -0.45
COL9A2-204ENST00000427563 FCER1GP30273 86 aa12.24□□□□□ -0.45
COL9A2-204ENST00000427563 CIRBPQ14011 172 aaKnown RBP12.24□□□□□ -0.45
COL9A2-204ENST00000427563 TMEM101Q96IK0 257 aa12.24□□□□□ -0.45
COL9A2-204ENST00000427563 UBE2D4Q9Y2X8 147 aa12.24□□□□□ -0.45
COL9A2-204ENST00000427563 CCL25O15444 150 aa12.23□□□□□ -0.45
COL9A2-204ENST00000427563 TRGC2P03986 189 aa12.23□□□□□ -0.45
COL9A2-204ENST00000427563 CHTF8P0CG12 524 aa12.23□□□□□ -0.45
COL9A2-204ENST00000427563 XCL1P47992 114 aa12.23□□□□□ -0.45
COL9A2-204ENST00000427563 ZNF664Q8N3J9 261 aa12.23□□□□□ -0.45
COL9A2-204ENST00000427563 Q8N8P6 123 aa12.23□□□□□ -0.45
COL9A2-204ENST00000427563 DMBT1Q9UGM3 2413 aaPredicted RBP12.23□□□□□ -0.45
COL9A2-204ENST00000427563 LRP1Q07954 4544 aaKnown RBP12.23□□□□□ -0.45
COL9A2-204ENST00000427563 GVQW2A0A096LPI5 108 aaPredicted RBP12.22□□□□□ -0.45
COL9A2-204ENST00000427563 TCAPO15273 167 aa12.22□□□□□ -0.45
COL9A2-204ENST00000427563 FAM104AQ969W3 186 aa12.22□□□□□ -0.45
COL9A2-204ENST00000427563 NXT2Q9NPJ8 142 aaKnown RBP12.22□□□□□ -0.45
COL9A2-204ENST00000427563 AP5S1Q9NUS5 200 aa12.22□□□□□ -0.45
COL9A2-204ENST00000427563 IFI27P40305 119 aaPredicted RBP12.21□□□□□ -0.45
COL9A2-204ENST00000427563 RNASE13Q5GAN3 156 aaKnown RBP12.21□□□□□ -0.45
COL9A2-204ENST00000427563 CFAP161Q6P656 301 aa12.21□□□□□ -0.45
COL9A2-204ENST00000427563 CSDC2Q9Y534 153 aaKnown RBP12.21□□□□□ -0.45
COL9A2-204ENST00000427563 FAT3Q8TDW7 4589 aa12.21□□□□□ -0.45
COL9A2-204ENST00000427563 IGHV3-64A0A075B6Q5 118 aa12.2□□□□□ -0.46
COL9A2-204ENST00000427563 C18orf32Q8TCD1 76 aa12.2□□□□□ -0.46
COL9A2-204ENST00000427563 RPL39P62891 51 aaKnown RBP12.19□□□□□ -0.46
COL9A2-204ENST00000427563 Q6ZUT4 128 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms