RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 TMEM101Q96IK0 257 aa13.15□□□□□ -0.3
UBXN4-204ENST00000426921 LINC00959A0A1B0GUT2 108 aa13.14□□□□□ -0.31
UBXN4-204ENST00000426921 ZNF727A8MUV8 499 aa13.14□□□□□ -0.31
UBXN4-204ENST00000426921 RAB4AP20338 218 aa13.14□□□□□ -0.31
UBXN4-204ENST00000426921 CCL25O15444 150 aa13.13□□□□□ -0.31
UBXN4-204ENST00000426921 SRP19P09132 144 aaKnown RBP13.13□□□□□ -0.31
UBXN4-204ENST00000426921 XCL1P47992 114 aa13.13□□□□□ -0.31
UBXN4-204ENST00000426921 CDC42SE2Q9NRR3 84 aa13.13□□□□□ -0.31
UBXN4-204ENST00000426921 PHOX2AO14813 284 aa13.12□□□□□ -0.31
UBXN4-204ENST00000426921 AMN1Q8IY45 258 aa13.12□□□□□ -0.31
UBXN4-204ENST00000426921 C7orf33Q8WU49 177 aa13.12□□□□□ -0.31
UBXN4-204ENST00000426921 PLA2G2DQ9UNK4 145 aa13.12□□□□□ -0.31
UBXN4-204ENST00000426921 V9GYV3 84 aa13.12□□□□□ -0.31
UBXN4-204ENST00000426921 IGHV1-58A0A0C4DH39 117 aa13.11□□□□□ -0.31
UBXN4-204ENST00000426921 C7orf77A4D0Y5 90 aa13.11□□□□□ -0.31
UBXN4-204ENST00000426921 MAJINQ3KP22 176 aa13.11□□□□□ -0.31
UBXN4-204ENST00000426921 TNXBP22105 4242 aa13.11□□□□□ -0.31
UBXN4-204ENST00000426921 IGKV2-24A0A0C4DH68 120 aa13.1□□□□□ -0.31
UBXN4-204ENST00000426921 NUP35Q8NFH5 326 aa13.1□□□□□ -0.31
UBXN4-204ENST00000426921 PKIGQ9Y2B9 76 aa13.1□□□□□ -0.31
UBXN4-204ENST00000426921 A0A096LNI7 61 aa13.09□□□□□ -0.31
UBXN4-204ENST00000426921 RIGQ13278 110 aa13.09□□□□□ -0.31
UBXN4-204ENST00000426921 CD164L2Q6UWJ8 174 aa13.09□□□□□ -0.31
UBXN4-204ENST00000426921 ZNF664Q8N3J9 261 aa13.09□□□□□ -0.31
UBXN4-204ENST00000426921 ISOC2Q96AB3 205 aa13.09□□□□□ -0.31
UBXN4-204ENST00000426921 PPP1R17O96001 155 aa13.08□□□□□ -0.32
UBXN4-204ENST00000426921 SS18Q15532 418 aa13.08□□□□□ -0.32
UBXN4-204ENST00000426921 STPG4Q8N801 248 aa13.08□□□□□ -0.32
UBXN4-204ENST00000426921 NRACQ8N912 160 aa13.08□□□□□ -0.32
UBXN4-204ENST00000426921 LINC00474Q9P2X8 69 aa13.08□□□□□ -0.32
UBXN4-204ENST00000426921 CSDC2Q9Y534 153 aaKnown RBP13.08□□□□□ -0.32
UBXN4-204ENST00000426921 VCYO14598 125 aa13.07□□□□□ -0.32
UBXN4-204ENST00000426921 FAM74A3Q4VXF1 159 aa13.07□□□□□ -0.32
UBXN4-204ENST00000426921 CARD19Q96LW7 228 aa13.07□□□□□ -0.32
UBXN4-204ENST00000426921 SMKR1H3BMG3 65 aa13.06□□□□□ -0.32
UBXN4-204ENST00000426921 SUMO2P61956 95 aaKnown RBP13.06□□□□□ -0.32
UBXN4-204ENST00000426921 PRR3P79522 188 aaKnown RBP13.06□□□□□ -0.32
UBXN4-204ENST00000426921 NAT8BQ9UHF3 227 aa13.06□□□□□ -0.32
UBXN4-204ENST00000426921 UBR4Q5T4S7 5183 aa13.06□□□□□ -0.32
UBXN4-204ENST00000426921 RPL23P62829 140 aaKnown RBP13.05□□□□□ -0.32
UBXN4-204ENST00000426921 TMEM241Q24JQ0 296 aa13.05□□□□□ -0.32
UBXN4-204ENST00000426921 FCER1GP30273 86 aa13.04□□□□□ -0.32
UBXN4-204ENST00000426921 LINC00526Q96FQ7 95 aa13.04□□□□□ -0.32
UBXN4-204ENST00000426921 UBE2D4Q9Y2X8 147 aa13.04□□□□□ -0.32
UBXN4-204ENST00000426921 PPP1R2P9O14990 202 aa13.03□□□□□ -0.32
UBXN4-204ENST00000426921 SYCNQ0VAF6 134 aa13.03□□□□□ -0.32
UBXN4-204ENST00000426921 SMAGPQ0VAQ4 97 aa13.03□□□□□ -0.32
UBXN4-204ENST00000426921 FAM104BQ5XKR9 115 aa13.03□□□□□ -0.32
UBXN4-204ENST00000426921 KIR2DL4Q99706 377 aa13.03□□□□□ -0.32
UBXN4-204ENST00000426921 C1orf196B1AJZ1 125 aa13.02□□□□□ -0.33
UBXN4-204ENST00000426921 ZNF561-AS1K7EIQ3 104 aa13.02□□□□□ -0.33
UBXN4-204ENST00000426921 SMIM27A0A1W2PRY6 76 aa13.01□□□□□ -0.33
UBXN4-204ENST00000426921 CAMPP49913 170 aa13.01□□□□□ -0.33
UBXN4-204ENST00000426921 MRPL51Q4U2R6 128 aaKnown RBP13.01□□□□□ -0.33
UBXN4-204ENST00000426921 NAT8Q9UHE5 227 aa13.01□□□□□ -0.33
UBXN4-204ENST00000426921 C9JQL5 133 aa13□□□□□ -0.33
UBXN4-204ENST00000426921 RPL32P62910 135 aaKnown RBP13□□□□□ -0.33
UBXN4-204ENST00000426921 ADIRFQ15847 76 aa13□□□□□ -0.33
UBXN4-204ENST00000426921 C20orf78Q9BR46 151 aa13□□□□□ -0.33
UBXN4-204ENST00000426921 TIMM21Q9BVV7 248 aa13□□□□□ -0.33
UBXN4-204ENST00000426921 TRBV24-1A0A075B6N3 115 aa12.99□□□□□ -0.33
UBXN4-204ENST00000426921 A0A1B0GW15 77 aa12.99□□□□□ -0.33
UBXN4-204ENST00000426921 LINC00862A6NCI5 91 aa12.99□□□□□ -0.33
UBXN4-204ENST00000426921 COX7A2LO14548 114 aa12.99□□□□□ -0.33
UBXN4-204ENST00000426921 Q6ZUT4 128 aa12.98□□□□□ -0.33
UBXN4-204ENST00000426921 IGLV4-69A0A075B6H9 119 aa12.97□□□□□ -0.33
UBXN4-204ENST00000426921 MALP21145 153 aa12.97□□□□□ -0.33
UBXN4-204ENST00000426921 PTTG1IPP53801 180 aa12.97□□□□□ -0.33
UBXN4-204ENST00000426921 RNASE13Q5GAN3 156 aaKnown RBP12.97□□□□□ -0.33
UBXN4-204ENST00000426921 TMEM18Q96B42 140 aa12.97□□□□□ -0.33
UBXN4-204ENST00000426921 LINC01600Q96MT4 127 aa12.97□□□□□ -0.33
UBXN4-204ENST00000426921 SMDT1Q9H4I9 107 aa12.97□□□□□ -0.33
UBXN4-204ENST00000426921 TCAPO15273 167 aa12.96□□□□□ -0.33
UBXN4-204ENST00000426921 TRAV13-1A0A0B4J241 112 aa12.95□□□□□ -0.34
UBXN4-204ENST00000426921 LOC107984640A0A0U1RRK4 108 aa12.95□□□□□ -0.34
UBXN4-204ENST00000426921 A0A1B0GVG6 124 aa12.95□□□□□ -0.34
UBXN4-204ENST00000426921 SRSF3P84103 164 aaKnown RBP12.95□□□□□ -0.34
UBXN4-204ENST00000426921 C2orf48Q96LS8 159 aa12.95□□□□□ -0.34
UBXN4-204ENST00000426921 CKS2P33552 79 aa12.94□□□□□ -0.34
UBXN4-204ENST00000426921 PEA15Q15121 130 aa12.94□□□□□ -0.34
UBXN4-204ENST00000426921 SPINK6Q6UWN8 80 aa12.94□□□□□ -0.34
UBXN4-204ENST00000426921 A0A1B0GXF2 115 aa12.93□□□□□ -0.34
UBXN4-204ENST00000426921 TNFRSF6BO95407 300 aa12.93□□□□□ -0.34
UBXN4-204ENST00000426921 Q6ZRP5 223 aa12.93□□□□□ -0.34
UBXN4-204ENST00000426921 FAM104AQ969W3 186 aa12.93□□□□□ -0.34
UBXN4-204ENST00000426921 CAMK2N2Q96S95 79 aa12.93□□□□□ -0.34
UBXN4-204ENST00000426921 SMIM2Q9BVW6 85 aa12.93□□□□□ -0.34
UBXN4-204ENST00000426921 APOMO95445 188 aa12.92□□□□□ -0.34
UBXN4-204ENST00000426921 S100A8P05109 93 aa12.92□□□□□ -0.34
UBXN4-204ENST00000426921 HBBP68871 147 aa12.92□□□□□ -0.34
UBXN4-204ENST00000426921 C5orf38Q86SI9 138 aa12.92□□□□□ -0.34
UBXN4-204ENST00000426921 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.91□□□□□ -0.34
UBXN4-204ENST00000426921 RPL39P62891 51 aaKnown RBP12.91□□□□□ -0.34
UBXN4-204ENST00000426921 GAGE2BQ13066 116 aa12.91□□□□□ -0.34
UBXN4-204ENST00000426921 SRSF9Q13242 221 aaKnown RBP eCLIP12.91□□□□□ -0.34
UBXN4-204ENST00000426921 SPANXA1Q9NS26 97 aa12.91□□□□□ -0.34
UBXN4-204ENST00000426921 A0A0J9YXV3 536 aa12.9□□□□□ -0.34
UBXN4-204ENST00000426921 D6R8Y8 96 aa12.9□□□□□ -0.34
UBXN4-204ENST00000426921 F8W036 122 aa12.9□□□□□ -0.34
UBXN4-204ENST00000426921 OR10D4PQ8NGN7 298 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms