RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 FAM231DQ6ZW35 169 aa6.28□□□□□ -1.4
GACAT3-201ENST00000426539 STPG4Q8N801 248 aa6.28□□□□□ -1.4
GACAT3-201ENST00000426539 OR5A1Q8NGJ0 315 aa6.28□□□□□ -1.4
GACAT3-201ENST00000426539 C7orf33Q8WU49 177 aa6.28□□□□□ -1.4
GACAT3-201ENST00000426539 LINC00526Q96FQ7 95 aa6.28□□□□□ -1.4
GACAT3-201ENST00000426539 LINC00959A0A1B0GUT2 108 aa6.27□□□□□ -1.41
GACAT3-201ENST00000426539 I3L3M4 83 aa6.27□□□□□ -1.41
GACAT3-201ENST00000426539 GATCO43716 136 aaKnown RBP6.27□□□□□ -1.41
GACAT3-201ENST00000426539 ZNF25P17030 456 aaPredicted RBP6.27□□□□□ -1.41
GACAT3-201ENST00000426539 XCL1P47992 114 aa6.27□□□□□ -1.41
GACAT3-201ENST00000426539 IFITM2Q01629 132 aa6.27□□□□□ -1.41
GACAT3-201ENST00000426539 TEX261Q6UWH6 196 aa6.27□□□□□ -1.41
GACAT3-201ENST00000426539 LYPD6BQ8NI32 183 aa6.27□□□□□ -1.41
GACAT3-201ENST00000426539 LINC01600Q96MT4 127 aa6.27□□□□□ -1.41
GACAT3-201ENST00000426539 TMEM242Q9NWH2 141 aa6.27□□□□□ -1.41
GACAT3-201ENST00000426539 TNXBP22105 4242 aa6.27□□□□□ -1.41
GACAT3-201ENST00000426539 TMEM250H0YL14 139 aa6.26□□□□□ -1.41
GACAT3-201ENST00000426539 CCL25O15444 150 aa6.26□□□□□ -1.41
GACAT3-201ENST00000426539 PMCHP20382 165 aa6.26□□□□□ -1.41
GACAT3-201ENST00000426539 SMIM15Q7Z3B0 74 aa6.26□□□□□ -1.41
GACAT3-201ENST00000426539 IGHV1-58A0A0C4DH39 117 aa6.25□□□□□ -1.41
GACAT3-201ENST00000426539 A8MWL6 223 aa6.25□□□□□ -1.41
GACAT3-201ENST00000426539 POLR2KP53803 58 aaKnown RBP6.25□□□□□ -1.41
GACAT3-201ENST00000426539 CT83Q5H943 113 aa6.25□□□□□ -1.41
GACAT3-201ENST00000426539 MRPL52Q86TS9 123 aaKnown RBP6.25□□□□□ -1.41
GACAT3-201ENST00000426539 KRTAP9-2Q9BYQ4 174 aa6.25□□□□□ -1.41
GACAT3-201ENST00000426539 CDC42SE2Q9NRR3 84 aa6.25□□□□□ -1.41
GACAT3-201ENST00000426539 TRBV27A0A0K0K1C4 114 aa6.24□□□□□ -1.41
GACAT3-201ENST00000426539 RAB4AP20338 218 aa6.24□□□□□ -1.41
GACAT3-201ENST00000426539 LRP2P98164 4655 aa6.24□□□□□ -1.41
GACAT3-201ENST00000426539 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
GACAT3-201ENST00000426539 ALKAL2Q6UX46 152 aa6.24□□□□□ -1.41
GACAT3-201ENST00000426539 TMEM101Q96IK0 257 aa6.24□□□□□ -1.41
GACAT3-201ENST00000426539 BTF3L4Q96K17 158 aa6.24□□□□□ -1.41
GACAT3-201ENST00000426539 CARD19Q96LW7 228 aa6.24□□□□□ -1.41
GACAT3-201ENST00000426539 KRTAP4-12Q9BQ66 201 aa6.24□□□□□ -1.41
GACAT3-201ENST00000426539 TMEM191AQ9H0A3 160 aa6.24□□□□□ -1.41
GACAT3-201ENST00000426539 ST20Q9HBF5 79 aa6.24□□□□□ -1.41
GACAT3-201ENST00000426539 A0A0J9YXV3 536 aa6.23□□□□□ -1.41
GACAT3-201ENST00000426539 HIGD1CA8MV81 97 aa6.23□□□□□ -1.41
GACAT3-201ENST00000426539 CEBPGP53567 150 aa6.23□□□□□ -1.41
GACAT3-201ENST00000426539 KRTAP10-8P60410 259 aa6.23□□□□□ -1.41
GACAT3-201ENST00000426539 SRSF9Q13242 221 aaKnown RBP eCLIP6.23□□□□□ -1.41
GACAT3-201ENST00000426539 NDUFA5Q16718 116 aa6.23□□□□□ -1.41
GACAT3-201ENST00000426539 CD164L2Q6UWJ8 174 aa6.23□□□□□ -1.41
GACAT3-201ENST00000426539 LINC01551Q86U37 167 aa6.23□□□□□ -1.41
GACAT3-201ENST00000426539 KRTAP19-1Q8IUB9 90 aa6.23□□□□□ -1.41
GACAT3-201ENST00000426539 AMN1Q8IY45 258 aa6.23□□□□□ -1.41
GACAT3-201ENST00000426539 ZNF664Q8N3J9 261 aa6.23□□□□□ -1.41
GACAT3-201ENST00000426539 TSKUQ8WUA8 353 aa6.23□□□□□ -1.41
GACAT3-201ENST00000426539 MRAP2Q96G30 205 aa6.23□□□□□ -1.41
GACAT3-201ENST00000426539 A0A1B0GUT8 65 aa6.22□□□□□ -1.41
GACAT3-201ENST00000426539 SMKR1H3BMG3 65 aa6.22□□□□□ -1.41
GACAT3-201ENST00000426539 BLOC1S1P78537 153 aa6.22□□□□□ -1.41
GACAT3-201ENST00000426539 SYCNQ0VAF6 134 aa6.22□□□□□ -1.41
GACAT3-201ENST00000426539 SS18Q15532 418 aa6.22□□□□□ -1.41
GACAT3-201ENST00000426539 SPINK6Q6UWN8 80 aa6.22□□□□□ -1.41
GACAT3-201ENST00000426539 LINC00474Q9P2X8 69 aa6.22□□□□□ -1.41
GACAT3-201ENST00000426539 IGLV4-69A0A075B6H9 119 aa6.21□□□□□ -1.42
GACAT3-201ENST00000426539 C7orf77A4D0Y5 90 aa6.21□□□□□ -1.42
GACAT3-201ENST00000426539 PTTG1IPP53801 180 aa6.21□□□□□ -1.42
GACAT3-201ENST00000426539 NRACQ8N912 160 aa6.21□□□□□ -1.42
GACAT3-201ENST00000426539 BORCS7Q96B45 105 aa6.21□□□□□ -1.42
GACAT3-201ENST00000426539 FAM210AQ96ND0 272 aa6.21□□□□□ -1.42
GACAT3-201ENST00000426539 SMIM7Q9BQ49 75 aa6.21□□□□□ -1.42
GACAT3-201ENST00000426539 OSTCQ9NRP0 149 aa6.21□□□□□ -1.42
GACAT3-201ENST00000426539 V9GYV3 84 aa6.21□□□□□ -1.42
GACAT3-201ENST00000426539 A0A1W2PNN7 141 aa6.2□□□□□ -1.42
GACAT3-201ENST00000426539 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.2□□□□□ -1.42
GACAT3-201ENST00000426539 ZNF561-AS1K7EIQ3 104 aa6.2□□□□□ -1.42
GACAT3-201ENST00000426539 ATP6V1G1O75348 118 aa6.2□□□□□ -1.42
GACAT3-201ENST00000426539 SRP19P09132 144 aaKnown RBP6.2□□□□□ -1.42
GACAT3-201ENST00000426539 CAMPP49913 170 aa6.2□□□□□ -1.42
GACAT3-201ENST00000426539 RNASE13Q5GAN3 156 aaKnown RBP6.2□□□□□ -1.42
GACAT3-201ENST00000426539 Q6ZRP5 223 aa6.2□□□□□ -1.42
GACAT3-201ENST00000426539 NUP35Q8NFH5 326 aa6.2□□□□□ -1.42
GACAT3-201ENST00000426539 UBE2D4Q9Y2X8 147 aa6.2□□□□□ -1.42
GACAT3-201ENST00000426539 KRTAP9-6A0A140TA67 174 aa6.19□□□□□ -1.42
GACAT3-201ENST00000426539 ZNF727A8MUV8 499 aa6.19□□□□□ -1.42
GACAT3-201ENST00000426539 VCYO14598 125 aa6.19□□□□□ -1.42
GACAT3-201ENST00000426539 GAGE2BQ13066 116 aa6.19□□□□□ -1.42
GACAT3-201ENST00000426539 FAM104AQ969W3 186 aa6.19□□□□□ -1.42
GACAT3-201ENST00000426539 EIF5A2Q9GZV4 153 aaKnown RBP6.19□□□□□ -1.42
GACAT3-201ENST00000426539 PKIGQ9Y2B9 76 aa6.19□□□□□ -1.42
GACAT3-201ENST00000426539 TMA7Q9Y2S6 64 aaKnown RBP6.19□□□□□ -1.42
GACAT3-201ENST00000426539 CSDC2Q9Y534 153 aaKnown RBP6.19□□□□□ -1.42
GACAT3-201ENST00000426539 TRAV13-1A0A0B4J241 112 aa6.18□□□□□ -1.42
GACAT3-201ENST00000426539 LOC107984640A0A0U1RRK4 108 aa6.18□□□□□ -1.42
GACAT3-201ENST00000426539 C1orf196B1AJZ1 125 aa6.18□□□□□ -1.42
GACAT3-201ENST00000426539 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.18□□□□□ -1.42
GACAT3-201ENST00000426539 COX7A2LO14548 114 aa6.18□□□□□ -1.42
GACAT3-201ENST00000426539 FCER1GP30273 86 aa6.18□□□□□ -1.42
GACAT3-201ENST00000426539 SUMO2P61956 95 aaKnown RBP6.18□□□□□ -1.42
GACAT3-201ENST00000426539 REG3GQ6UW15 175 aa6.18□□□□□ -1.42
GACAT3-201ENST00000426539 Q6ZUT4 128 aa6.18□□□□□ -1.42
GACAT3-201ENST00000426539 SLC7A5P1Q8MH63 180 aa6.18□□□□□ -1.42
GACAT3-201ENST00000426539 ISOC2Q96AB3 205 aa6.18□□□□□ -1.42
GACAT3-201ENST00000426539 APOMO95445 188 aa6.17□□□□□ -1.42
GACAT3-201ENST00000426539 MALP21145 153 aa6.17□□□□□ -1.42
GACAT3-201ENST00000426539 RIGQ13278 110 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms